Status
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Gene information
General information
TC007618 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007419.2: 2260283..2272150
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC007618
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
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    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
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    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_09855

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 40.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 4 (3 dpi)
    Days post injection


    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 20
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC007618 RA
      MIGLQECGP APPRAPVSG SRARDRAAQ AVDYYNTHV 
      HRAWANAGL SRSSFNDRH QSSTRRHHL APEQLYRSN 
      SSLELLDHN GRPSNPSTP TLKREYGSH GSIDVIDRP 
      PAVGESFFA MLQDYQPAV LGAIAADQR SPGPAEYLR 
      GKVDVESVE DVPSSPKSR VKLSRFWSN GQVNVKNQR 
      QAMDDSMVN TSSSSCSVI CSAEAEEIA RRRAFSHYD 
      CQSLTTNLN YTARLRRIL AKRRNTTTG ASAASMLAK 
      SFTSDGDSG EEDNGDGQN NDLVQSCPF FRNEIGGEE 
      ERIVSLTRL QSSQGLGGK KPLHRPPLA YGVAVLEFP 
      PGETHWRHS TCPYQRLPR PIESVDQGA LYYRKYFYG 
      QEHQNWFGM DEQLGPVAI SIRREKVLH PDNQLSSSS 
      IMQYQYRLV IRTSELQTF RGAILEDAI PSIKASSSS 
      KTFNIKEVL EYVAPEIQL SSLRLGVQN QQTEEQLLK 
      LDEQGLNNH YKVGVMYCK ADQSSEEEM YNNEEAGPA 
      FVEFLETIG KKVRLKGFA KYKAGLDNK SDSTGLYSV 
      YSQYQDCEI MFHVSTMLP FTPNNRQQL LRKRHIGND 
      IVTIVFQEP GALPFTPKG IRSQFQHVF IVVQAINPC 
      TENTHYKVA VSRSKDVEV FGPPIKDGA IFPKGKAFA 
      EFLLAKVVN AENAAHRSE KFVTMATRT RQEYLKELV 
      TNSSTSTPV DTHQKFSIF SSKKKDKIR PRFIPDACQ 
      RGAILWQVL LDDSGQSQR IECFLGIST DSLVLIEET 
      SKQIVFVTP CKSILGWST LSNGLRIYH HQGECMTIH 
      MRDGQGDRD ELMEVMQRL QAVTQGVLA KELSLKRNI 
      MGQLGFHVQ PDGIVTLVE SSGEAWHGG LRQNSRLVE 
      ICKVAVSTL TYDQMVDLL KTSIVVTLT VIPPLPDGS 
      PRKGCTLQN CKYNEGNYE GDYENLDDG KSRKAPQMQ 
      QAGNHRRIY ERSFSPPRS SNSSGYGTG SSSKSFHNP 
      EGTLTSSSS GHSGDDKWY DVLQELEVP PVPQKTPSR 
      TNNTFPTPK RTNQIQVSH NHFGPQQIH HSKVQISHS 
      LPLQHVNYS QPLTAVVHN NTDYESYNK EKNNVKQQS 
      DYVMRQLND FRLNDGHST DSSMYGGLG SEDELSNGS 
      GNVSPRSRR AKQLTSNSR NHSPRSVNG EAKLRPGVT 
      PRSSNRNSA NLSSSNFQE ELLRLINPD SIEASTEPK 
      ETTSHSSSN LSHKTQPEV ILTMARPAT VISNASTTS 
      SPLPAEFKG SKDELNTKT KSVVSLEEY PVPEDWPTL 
      VDTATRVLM QVASDSYKR DEGKWDEEA PIDASITSS 
      VSSSTSVPE LQNHVTDLE SSLKRETRR RLSLENEVR 
      RLKEENKKL KDQAQSAVQ QLRKFTEWF FKNVQRHSS 
      VMIIHS
    • >TC007618 RB
      MIGLQECGP APPRAPVSG SRARDRAAQ AVDYYNTHV 
      HRAWANAGL SRSSFNDRH QSSTRRHHL APEQLYRSN 
      SSLELLDHN GRPSNPSTP TLKREYGSH GSIDVIDRP 
      PAVGESFFA MLQDYQPAV LGAIAADQR SPGPAEYLR 
      GKVDVESVE DVPSSPKSR VKLSRFWSN GQVNVKNQR 
      QAMDDSMVN TSSSSCSVI CSAEAEEIA RRRAFSHYD 
      CQSLTTNLN YTARLRRIL AKRRNTTTG ASAASMLAK 
      SFTSDGDSG EEDNGDGQN NDLVQSCPF FRNEIGGEE 
      ERIVSLTRL QSSQGLGGK KPLHRPPLA YGVAVLEFP 
      PGETHWRHS TCPYQRLPR PIESVDQGA LYYRKYFYG 
      QEHQNWFGM DEQLGPVAI SIRREKVLH PDNQLSSSS 
      IMQYQYRLV IRTSELQTF RGAILEDAI PSIKASSSS 
      KTFNIKEVL EYVAPEIQL SSLRLGVQN QQTEEQLLK 
      LDEQGLNNH YKVGVMYCK ADQSSEEEM YNNEEAGPA 
      FVEFLETIG KKVRLKGFA KYKAGLDNK SDSTGLYSV 
      YSQYQDCEI MFHVSTMLP FTPNNRQQL LRKRHIGND 
      IVTIVFQEP GALPFTPKG IRSQFQHVF IVVQAINPC 
      TENTHYKVA VSRSKDVEV FGPPIKDGA IFPKGKAFA 
      EFLLAKVVN AENAAHRSE KFVTMATRT RQEYLKELV 
      TNSSTSTPV DTHQKFSIF SSKKKDKIR PRFIPDACQ 
      RGAILWQVL LDDSGQSQR IECFLGIST DSLVLIEET 
      SKQIVFVTP CKSILGWST LSNGLRIYH HQGECMTIH 
      MRDGQGDRD ELMEVMQRL QAVTQGVLA KELSLKRNI 
      MGQLGFHVQ PDGIVTLVE SSGEAWHGG LRQNSRLVE 
      ICKVAVSTL TYDQMVDLL KTSIVVTLT VIPPLPDGS 
      PRKGCTLQN CKYNEGNYE GDYENLDDG KSRKAPQMQ 
      QAGNHRRIY ERSFSPPRS SNSSGYGTG SSSKSFHNP 
      EGTLTSSSS GHSGDDKWY DVLQELEVP PVPQKTPSR 
      TNNTFPTPK RTNQIQVSH NHFGPQQIH HSKVQISHS 
      LPLQHVNYS QPLTAVVHN NTDYESYNK EKNNVKQQS 
      DYVMRQLND FRLNDGHST DSSMYGGLG SEDELSNGS 
      GNVSPRSRR AKQLTSNSR NHSPRSVNG EAKLRPGVT 
      PRSSNRNSA NLSSSNFQE ELLRLINPD SIEASTEPK 
      ETTSHSSSN LSHKTQPEV ILTMARPAT VISNASTTS 
      SPLPAEFKG SKDELNTKT KSVVSLEEY PVPEDWPTL 
      VDTATRVLM QVASDSYKR DEGKWDEEA PIDASITSS 
      VSSSTSVPE LQNHVTDLE SSLKRETRR RLSLENEVR 
      RLKEENKKL KDQAQSAVQ QLRKFTEWF FKNVQRQ
    CDS sequence
    • >TC007618 RA
      atgatcggc ttgcaagaa tgcgggccc gcgccacct 
      agagcgccg gtttcggga agccgggcc cgtgaccgc 
      gcggcccaa gccgtggac tactacaac acccacgtg 
      caccgtgcc tgggcaaac gccggcctc tcgagatcg 
      tcattcaac gaccgccac cagtcgtcg acgcgccgc 
      caccatcta gcccccgag cagctctac cgcagcaac 
      tccagcttg gagctgctg gaccacaac ggccgcccg 
      tcgaacccg tcgactccg acgctgaag cgcgagtac 
      ggcagccac ggcagcatc gacgtcatc gaccggcca 
      ccggccgtc ggcgagtcg ttctttgcc atgctccag 
      gactaccag ccggccgtg ctgggagcc atcgccgcc 
      gaccagcga tcccccggc cccgccgag tacctgcgc 
      gggaaggtc gatgtcgag agcgtcgaa gacgtcccc 
      agcagcccc aagtcgcgg gtgaagttg tccaggttc 
      tggagcaac ggacaggtt aacgtgaaa aaccagaga 
      caagccatg gacgatagc atggtgaac acgtcttcc 
      agtagttgt agtgttatt tgttcggcg gaagccgag 
      gagattgca aggaggagg gctttcagt cactatgat 
      tgtcagtcg ttgacgacg aatttgaat tacacggcc 
      aggttgagg cgaattttg gccaagaga cggaacacg 
      acaacgggg gcttcggcc gcctcgatg ttagccaaa 
      tcttttacc tcggatggg gacagtggg gaggaggac 
      aacggtgat ggacaaaac aacgatctc gtgcagagt 
      tgtccattt ttccgcaac gaaatcgga ggggaagaa 
      gaacgaatt gttagtttg accagattg caaagtagt 
      caagggtta ggcggcaag aaaccttta catcgtcca 
      ccacttgct tacggcgtt gccgtccta gaattccct 
      ccaggggaa acgcactgg agacattcc acttgtccc 
      taccagcgc ttacccagg cccattgaa agcgtcgat 
      cagggcgct ttgtactat cgaaagtat ttctacgga 
      caagagcac cagaattgg tttggaatg gacgaacaa 
      ctcggtccc gtggcaatt tccatcaga cgcgagaaa 
      gtcctccat cccgacaac cagctctct tcatcttca 
      ataatgcaa taccaatac cggctcgta attcgtact 
      tccgagctc caaaccttc cgtggagcg attcttgag 
      gatgccatt cccagcatt aaggcatct agtagtagc 
      aaaactttc aacataaag gaggttctc gaatacgtc 
      gctcccgaa atccaattg agctcgtta cgattaggc 
      gtccagaac cagcaaacc gaagaacaa ttactgaaa 
      ttggacgag caaggactt aacaaccat tacaaagtc 
      ggcgtaatg tattgcaaa gcggaccaa tcgtccgag 
      gaggaaatg tacaataac gaggaagcc ggtccagct 
      ttcgtcgag tttctcgaa actatcggg aaaaaagtc 
      aggcttaaa ggcttcgcg aagtacaaa gctggactt 
      gataacaaa tccgactcc accggttta tactccgtc 
      tactcgcaa taccaggac tgcgaaatc atgtttcac 
      gtgtcgacc atgctaccc ttcacgcca aacaaccgg 
      caacagctc ctccgcaag cgccatatc ggcaacgac 
      atcgtcacg atagtgttc caagaaccg ggtgcctta 
      cccttcaca cccaaagga atccggtcg cagttccaa 
      cacgtcttc atcgtagtc caagcgatt aacccctgc 
      accgaaaac acccactac aaagtggcc gtgagccgc 
      tcaaaggac gtcgaagtg ttcgggcct ccgattaaa 
      gacggcgcc atttttccc aaaggcaaa gccttcgct 
      gaatttctc ttagccaag gttgtgaac gccgaaaat 
      gccgcccac cgctcggag aaattcgta acaatggcc 
      acacgcacc agacaagag tatttgaaa gagctggtg 
      accaacagc tcaacttcg acgccggtg gacacccac 
      cagaagttt tcgattttc agcagcaaa aagaaggat 
      aagattagg ccacgcttt atacccgat gcctgccaa 
      cgaggggcg attttgtgg caggttttg ctggatgac 
      agtgggcaa tcacaacga atcgaatgc ttcctaggc 
      attagtacc gatagtttg gtcttgatt gaagaaaca 
      tcgaagcaa attgtgttc gttacgccg tgtaagtca 
      atcctgggg tggtcgact ctttcgaac ggcttgaga 
      atttaccac caccagggc gaatgcatg actatacac 
      atgagggat ggacaaggg gaccgtgat gagttgatg 
      gaggtgatg cagaggttg caagcagtg actcaagga 
      gtgttggct aaggagtta tccttgaaa cgcaacatc 
      atggggcag ctgggtttc cacgtccaa cccgatggc 
      attgtaacc ctggtcgag agttcgggc gaagcctgg 
      catggaggc ctacgccag aattcccgc ctggtggag 
      atttgcaaa gtcgcagtt tcgactctg acctacgac 
      cagatggtc gatcttctc aaaacctcg atcgttgta 
      actttaact gtgataccg cccttaccc gacggctcc 
      cctcgcaag ggctgcact ctacaaaac tgtaaatat 
      aacgaaggt aactacgaa ggcgattac gagaatttg 
      gatgatggt aagtcacgc aaagcgcca cagatgcaa 
      caagcgggc aaccaccgg cggatctac gagaggagt 
      ttctcgcca ccgagatcg agtaatagt tccggttac 
      ggtaccgga agtagttct aaatcgttt cataatcct 
      gaaggaacc ctcacgagt tcctcaagc gggcattcg 
      ggggacgac aagtggtac gacgtcctg caggagttg 
      gaggtacca ccagtaccg caaaaaaca ccatcacgg 
      accaataac acgttcccg acgccgaaa cgcaccaac 
      caaatccaa gtctcgcat aatcacttc ggcccacag 
      cagatacat cacagtaaa gtacaaatc agtcattcg 
      ctgccgctg caacacgtc aattattcg caaccgttg 
      actgcggtc gttcacaat aacaccgac tacgagagt 
      tacaataaa gagaaaaac aacgtgaaa caacaaagc 
      gattatgtc atgagacaa ttgaacgat ttccggttg 
      aatgatgga cactcaacc gatagttcc atgtatggg 
      gggttaggg agcgaggat gagttgtcc aatggcagc 
      ggaaatgtg tctccgaga agtcgcagg gcgaagcag 
      ttaacaagt aatagtcgg aatcacagt ccgaggtca 
      gtcaatggt gaggctaag ctaagacct ggtgttacc 
      cccagatct tcgaatagg aacagcgcc aatttatcg 
      tcgagtaat tttcaagaa gagttgctc agattgata 
      aatccggac agtattgag gcttcaacc gagccgaaa 
      gaaacgacc agtcattcc agttcgaat ttatcgcac 
      aaaacgcag ccggaggtg atcctgacc atggcccgc 
      ccagccacc gttatttcg aacgctagc accacgtcc 
      agccccctg cccgccgaa ttcaaaggt tccaaagac 
      gagctcaat accaaaaca aaatcggtc gtgtctctc 
      gaagaatat ccggttccg gaggactgg ccgactctt 
      gtggacaca gctactcga gttttgatg caagtggct 
      tccgatagt tacaaacgt gacgaaggg aaatgggac 
      gaggaagcc ccaattgac gcgtcaatc acctcttca 
      gttagttcc agtacgagt gtgccggag ctgcagaac 
      catgtgacg gatttagag tcaagtttg aagcgagag 
      acgcggagg agattgtcg ttggagaac gaggtgagg 
      cggctgaag gaggagaac aagaaattg aaggatcaa 
      gcacagagt gccgtgcag cagttgcgc aagtttaca 
      gagtggttc ttcaagaac gtccaaagg cattctagt 
      gttatgatc atccattcc tga
    • >TC007618 RB
      atgatcggc ttgcaagaa tgcgggccc gcgccacct 
      agagcgccg gtttcggga agccgggcc cgtgaccgc 
      gcggcccaa gccgtggac tactacaac acccacgtg 
      caccgtgcc tgggcaaac gccggcctc tcgagatcg 
      tcattcaac gaccgccac cagtcgtcg acgcgccgc 
      caccatcta gcccccgag cagctctac cgcagcaac 
      tccagcttg gagctgctg gaccacaac ggccgcccg 
      tcgaacccg tcgactccg acgctgaag cgcgagtac 
      ggcagccac ggcagcatc gacgtcatc gaccggcca 
      ccggccgtc ggcgagtcg ttctttgcc atgctccag 
      gactaccag ccggccgtg ctgggagcc atcgccgcc 
      gaccagcga tcccccggc cccgccgag tacctgcgc 
      gggaaggtc gatgtcgag agcgtcgaa gacgtcccc 
      agcagcccc aagtcgcgg gtgaagttg tccaggttc 
      tggagcaac ggacaggtt aacgtgaaa aaccagaga 
      caagccatg gacgatagc atggtgaac acgtcttcc 
      agtagttgt agtgttatt tgttcggcg gaagccgag 
      gagattgca aggaggagg gctttcagt cactatgat 
      tgtcagtcg ttgacgacg aatttgaat tacacggcc 
      aggttgagg cgaattttg gccaagaga cggaacacg 
      acaacgggg gcttcggcc gcctcgatg ttagccaaa 
      tcttttacc tcggatggg gacagtggg gaggaggac 
      aacggtgat ggacaaaac aacgatctc gtgcagagt 
      tgtccattt ttccgcaac gaaatcgga ggggaagaa 
      gaacgaatt gttagtttg accagattg caaagtagt 
      caagggtta ggcggcaag aaaccttta catcgtcca 
      ccacttgct tacggcgtt gccgtccta gaattccct 
      ccaggggaa acgcactgg agacattcc acttgtccc 
      taccagcgc ttacccagg cccattgaa agcgtcgat 
      cagggcgct ttgtactat cgaaagtat ttctacgga 
      caagagcac cagaattgg tttggaatg gacgaacaa 
      ctcggtccc gtggcaatt tccatcaga cgcgagaaa 
      gtcctccat cccgacaac cagctctct tcatcttca 
      ataatgcaa taccaatac cggctcgta attcgtact 
      tccgagctc caaaccttc cgtggagcg attcttgag 
      gatgccatt cccagcatt aaggcatct agtagtagc 
      aaaactttc aacataaag gaggttctc gaatacgtc 
      gctcccgaa atccaattg agctcgtta cgattaggc 
      gtccagaac cagcaaacc gaagaacaa ttactgaaa 
      ttggacgag caaggactt aacaaccat tacaaagtc 
      ggcgtaatg tattgcaaa gcggaccaa tcgtccgag 
      gaggaaatg tacaataac gaggaagcc ggtccagct 
      ttcgtcgag tttctcgaa actatcggg aaaaaagtc 
      aggcttaaa ggcttcgcg aagtacaaa gctggactt 
      gataacaaa tccgactcc accggttta tactccgtc 
      tactcgcaa taccaggac tgcgaaatc atgtttcac 
      gtgtcgacc atgctaccc ttcacgcca aacaaccgg 
      caacagctc ctccgcaag cgccatatc ggcaacgac 
      atcgtcacg atagtgttc caagaaccg ggtgcctta 
      cccttcaca cccaaagga atccggtcg cagttccaa 
      cacgtcttc atcgtagtc caagcgatt aacccctgc 
      accgaaaac acccactac aaagtggcc gtgagccgc 
      tcaaaggac gtcgaagtg ttcgggcct ccgattaaa 
      gacggcgcc atttttccc aaaggcaaa gccttcgct 
      gaatttctc ttagccaag gttgtgaac gccgaaaat 
      gccgcccac cgctcggag aaattcgta acaatggcc 
      acacgcacc agacaagag tatttgaaa gagctggtg 
      accaacagc tcaacttcg acgccggtg gacacccac 
      cagaagttt tcgattttc agcagcaaa aagaaggat 
      aagattagg ccacgcttt atacccgat gcctgccaa 
      cgaggggcg attttgtgg caggttttg ctggatgac 
      agtgggcaa tcacaacga atcgaatgc ttcctaggc 
      attagtacc gatagtttg gtcttgatt gaagaaaca 
      tcgaagcaa attgtgttc gttacgccg tgtaagtca 
      atcctgggg tggtcgact ctttcgaac ggcttgaga 
      atttaccac caccagggc gaatgcatg actatacac 
      atgagggat ggacaaggg gaccgtgat gagttgatg 
      gaggtgatg cagaggttg caagcagtg actcaagga 
      gtgttggct aaggagtta tccttgaaa cgcaacatc 
      atggggcag ctgggtttc cacgtccaa cccgatggc 
      attgtaacc ctggtcgag agttcgggc gaagcctgg 
      catggaggc ctacgccag aattcccgc ctggtggag 
      atttgcaaa gtcgcagtt tcgactctg acctacgac 
      cagatggtc gatcttctc aaaacctcg atcgttgta 
      actttaact gtgataccg cccttaccc gacggctcc 
      cctcgcaag ggctgcact ctacaaaac tgtaaatat 
      aacgaaggt aactacgaa ggcgattac gagaatttg 
      gatgatggt aagtcacgc aaagcgcca cagatgcaa 
      caagcgggc aaccaccgg cggatctac gagaggagt 
      ttctcgcca ccgagatcg agtaatagt tccggttac 
      ggtaccgga agtagttct aaatcgttt cataatcct 
      gaaggaacc ctcacgagt tcctcaagc gggcattcg 
      ggggacgac aagtggtac gacgtcctg caggagttg 
      gaggtacca ccagtaccg caaaaaaca ccatcacgg 
      accaataac acgttcccg acgccgaaa cgcaccaac 
      caaatccaa gtctcgcat aatcacttc ggcccacag 
      cagatacat cacagtaaa gtacaaatc agtcattcg 
      ctgccgctg caacacgtc aattattcg caaccgttg 
      actgcggtc gttcacaat aacaccgac tacgagagt 
      tacaataaa gagaaaaac aacgtgaaa caacaaagc 
      gattatgtc atgagacaa ttgaacgat ttccggttg 
      aatgatgga cactcaacc gatagttcc atgtatggg 
      gggttaggg agcgaggat gagttgtcc aatggcagc 
      ggaaatgtg tctccgaga agtcgcagg gcgaagcag 
      ttaacaagt aatagtcgg aatcacagt ccgaggtca 
      gtcaatggt gaggctaag ctaagacct ggtgttacc 
      cccagatct tcgaatagg aacagcgcc aatttatcg 
      tcgagtaat tttcaagaa gagttgctc agattgata 
      aatccggac agtattgag gcttcaacc gagccgaaa 
      gaaacgacc agtcattcc agttcgaat ttatcgcac 
      aaaacgcag ccggaggtg atcctgacc atggcccgc 
      ccagccacc gttatttcg aacgctagc accacgtcc 
      agccccctg cccgccgaa ttcaaaggt tccaaagac 
      gagctcaat accaaaaca aaatcggtc gtgtctctc 
      gaagaatat ccggttccg gaggactgg ccgactctt 
      gtggacaca gctactcga gttttgatg caagtggct 
      tccgatagt tacaaacgt gacgaaggg aaatgggac 
      gaggaagcc ccaattgac gcgtcaatc acctcttca 
      gttagttcc agtacgagt gtgccggag ctgcagaac 
      catgtgacg gatttagag tcaagtttg aagcgagag 
      acgcggagg agattgtcg ttggagaac gaggtgagg 
      cggctgaag gaggagaac aagaaattg aaggatcaa 
      gcacagagt gccgtgcag cagttgcgc aagtttaca 
      gagtggttc ttcaagaac gtccaaagg cagtaa
    mRNA sequence
    • >TC007618 RA
      caccactga aagtttgtt tgttcttcg ggtggggcg 
      gtgtggtgc ggaggcgag ttttcgtga cgcagtcgc 
      gttttattg tgagtttta atgttttga catgtagtg 
      catttaaat tttcgtttc gatttgtgt ttttatttt 
      gattatgtg ttcgttttt cacgtgtcc acgtttagt 
      gtagtgcgt gtagcgtca ctgcaccgt ttttcacgt 
      agtgatcga cgctaactc gaaaaagca cacaccgcc 
      aagtggaag aaacggcgc tacggtgac gttattttg 
      tgtgcctcg acaaaagcg atcatctca gaacgaagg 
      ccgtgatgg gatgatcgg cttgcaaga atgcgggcc 
      cgcgccacc tagagcgcc ggtttcggg aagccgggc 
      ccgtgaccg cgcggccca agccgtgga ctactacaa 
      cacccacgt gcaccgtgc ctgggcaaa cgccggcct 
      ctcgagatc gtcattcaa cgaccgcca ccagtcgtc 
      gacgcgccg ccaccatct agcccccga gcagctcta 
      ccgcagcaa ctccagctt ggagctgct ggaccacaa 
      cggccgccc gtcgaaccc gtcgactcc gacgctgaa 
      gcgcgagta cggcagcca cggcagcat cgacgtcat 
      cgaccggcc accggccgt cggcgagtc gttctttgc 
      catgctcca ggactacca gccggccgt gctgggagc 
      catcgccgc cgaccagcg atcccccgg ccccgccga 
      gtacctgcg cgggaaggt cgatgtcga gagcgtcga 
      agacgtccc cagcagccc caagtcgcg ggtgaagtt 
      gtccaggtt ctggagcaa cggacaggt taacgtgaa 
      aaaccagag acaagccat ggacgatag catggtgaa 
      cacgtcttc cagtagttg tagtgttat ttgttcggc 
      ggaagccga ggagattgc aaggaggag ggctttcag 
      tcactatga ttgtcagtc gttgacgac gaatttgaa 
      ttacacggc caggttgag gcgaatttt ggccaagag 
      acggaacac gacaacggg ggcttcggc cgcctcgat 
      gttagccaa atcttttac ctcggatgg ggacagtgg 
      ggaggagga caacggtga tggacaaaa caacgatct 
      cgtgcagag ttgtccatt tttccgcaa cgaaatcgg 
      aggggaaga agaacgaat tgttagttt gaccagatt 
      gcaaagtag tcaagggtt aggcggcaa gaaaccttt 
      acatcgtcc accacttgc ttacggcgt tgccgtcct 
      agaattccc tccagggga aacgcactg gagacattc 
      cacttgtcc ctaccagcg cttacccag gcccattga 
      aagcgtcga tcagggcgc tttgtacta tcgaaagta 
      tttctacgg acaagagca ccagaattg gtttggaat 
      ggacgaaca actcggtcc cgtggcaat ttccatcag 
      acgcgagaa agtcctcca tcccgacaa ccagctctc 
      ttcatcttc aataatgca ataccaata ccggctcgt 
      aattcgtac ttccgagct ccaaacctt ccgtggagc 
      gattcttga ggatgccat tcccagcat taaggcatc 
      tagtagtag caaaacttt caacataaa ggaggttct 
      cgaatacgt cgctcccga aatccaatt gagctcgtt 
      acgattagg cgtccagaa ccagcaaac cgaagaaca 
      attactgaa attggacga gcaaggact taacaacca 
      ttacaaagt cggcgtaat gtattgcaa agcggacca 
      atcgtccga ggaggaaat gtacaataa cgaggaagc 
      cggtccagc tttcgtcga gtttctcga aactatcgg 
      gaaaaaagt caggcttaa aggcttcgc gaagtacaa 
      agctggact tgataacaa atccgactc caccggttt 
      atactccgt ctactcgca ataccagga ctgcgaaat 
      catgtttca cgtgtcgac catgctacc cttcacgcc 
      aaacaaccg gcaacagct cctccgcaa gcgccatat 
      cggcaacga catcgtcac gatagtgtt ccaagaacc 
      gggtgcctt acccttcac acccaaagg aatccggtc 
      gcagttcca acacgtctt catcgtagt ccaagcgat 
      taacccctg caccgaaaa cacccacta caaagtggc 
      cgtgagccg ctcaaagga cgtcgaagt gttcgggcc 
      tccgattaa agacggcgc catttttcc caaaggcaa 
      agccttcgc tgaatttct cttagccaa ggttgtgaa 
      cgccgaaaa tgccgccca ccgctcgga gaaattcgt 
      aacaatggc cacacgcac cagacaaga gtatttgaa 
      agagctggt gaccaacag ctcaacttc gacgccggt 
      ggacaccca ccagaagtt ttcgatttt cagcagcaa 
      aaagaagga taagattag gccacgctt tatacccga 
      tgcctgcca acgaggggc gattttgtg gcaggtttt 
      gctggatga cagtgggca atcacaacg aatcgaatg 
      cttcctagg cattagtac cgatagttt ggtcttgat 
      tgaagaaac atcgaagca aattgtgtt cgttacgcc 
      gtgtaagtc aatcctggg gtggtcgac tctttcgaa 
      cggcttgag aatttacca ccaccaggg cgaatgcat 
      gactataca catgaggga tggacaagg ggaccgtga 
      tgagttgat ggaggtgat gcagaggtt gcaagcagt 
      gactcaagg agtgttggc taaggagtt atccttgaa 
      acgcaacat catggggca gctgggttt ccacgtcca 
      acccgatgg cattgtaac cctggtcga gagttcggg 
      cgaagcctg gcatggagg cctacgcca gaattcccg 
      cctggtgga gatttgcaa agtcgcagt ttcgactct 
      gacctacga ccagatggt cgatcttct caaaacctc 
      gatcgttgt aactttaac tgtgatacc gcccttacc 
      cgacggctc ccctcgcaa gggctgcac tctacaaaa 
      ctgtaaata taacgaagg taactacga aggcgatta 
      cgagaattt ggatgatgg taagtcacg caaagcgcc 
      acagatgca acaagcggg caaccaccg gcggatcta 
      cgagaggag tttctcgcc accgagatc gagtaatag 
      ttccggtta cggtaccgg aagtagttc taaatcgtt 
      tcataatcc tgaaggaac cctcacgag ttcctcaag 
      cgggcattc gggggacga caagtggta cgacgtcct 
      gcaggagtt ggaggtacc accagtacc gcaaaaaac 
      accatcacg gaccaataa cacgttccc gacgccgaa 
      acgcaccaa ccaaatcca agtctcgca taatcactt 
      cggcccaca gcagataca tcacagtaa agtacaaat 
      cagtcattc gctgccgct gcaacacgt caattattc 
      gcaaccgtt gactgcggt cgttcacaa taacaccga 
      ctacgagag ttacaataa agagaaaaa caacgtgaa 
      acaacaaag cgattatgt catgagaca attgaacga 
      tttccggtt gaatgatgg acactcaac cgatagttc 
      catgtatgg ggggttagg gagcgagga tgagttgtc 
      caatggcag cggaaatgt gtctccgag aagtcgcag 
      ggcgaagca gttaacaag taatagtcg gaatcacag 
      tccgaggtc agtcaatgg tgaggctaa gctaagacc 
      tggtgttac ccccagatc ttcgaatag gaacagcgc 
      caatttatc gtcgagtaa ttttcaaga agagttgct 
      cagattgat aaatccgga cagtattga ggcttcaac 
      cgagccgaa agaaacgac cagtcattc cagttcgaa 
      tttatcgca caaaacgca gccggaggt gatcctgac 
      catggcccg cccagccac cgttatttc gaacgctag 
      caccacgtc cagccccct gcccgccga attcaaagg 
      ttccaaaga cgagctcaa taccaaaac aaaatcggt 
      cgtgtctct cgaagaata tccggttcc ggaggactg 
      gccgactct tgtggacac agctactcg agttttgat 
      gcaagtggc ttccgatag ttacaaacg tgacgaagg 
      gaaatggga cgaggaagc cccaattga cgcgtcaat 
      cacctcttc agttagttc cagtacgag tgtgccgga 
      gctgcagaa ccatgtgac ggatttaga gtcaagttt 
      gaagcgaga gacgcggag gagattgtc gttggagaa 
      cgaggtgag gcggctgaa ggaggagaa caagaaatt 
      gaaggatca agcacagag tgccgtgca gcagttgcg 
      caagtttac agagtggtt cttcaagaa cgtccaaag 
      gcattctag tgttatgat catccattc ctgacaaat 
      gaggagtat tgttgacgg tgacctgcg attgcctta 
      tgaatggat tttaaatat tttatttaa gcaacttgt 
      tatgtaacg taatttttc catttacta tgtcaatgt 
      ttatttaaa aataaaaat tctgaaact ga
    • >TC007618 RB
      caccactga aagtttgtt tgttcttcg ggtggggcg 
      gtgtggtgc ggaggcgag ttttcgtga cgcagtcgc 
      gttttattg tgagtttta atgttttga catgtagtg 
      catttaaat tttcgtttc gatttgtgt ttttatttt 
      gattatgtg ttcgttttt cacgtgtcc acgtttagt 
      gtagtgcgt gtagcgtca ctgcaccgt ttttcacgt 
      agtgatcga cgctaactc gaaaaagca cacaccgcc 
      aagtggaag aaacggcgc tacggtgac gttattttg 
      tgtgcctcg acaaaagcg atcatctca gaacgaagg 
      ccgtgatgg gatgatcgg cttgcaaga atgcgggcc 
      cgcgccacc tagagcgcc ggtttcggg aagccgggc 
      ccgtgaccg cgcggccca agccgtgga ctactacaa 
      cacccacgt gcaccgtgc ctgggcaaa cgccggcct 
      ctcgagatc gtcattcaa cgaccgcca ccagtcgtc 
      gacgcgccg ccaccatct agcccccga gcagctcta 
      ccgcagcaa ctccagctt ggagctgct ggaccacaa 
      cggccgccc gtcgaaccc gtcgactcc gacgctgaa 
      gcgcgagta cggcagcca cggcagcat cgacgtcat 
      cgaccggcc accggccgt cggcgagtc gttctttgc 
      catgctcca ggactacca gccggccgt gctgggagc 
      catcgccgc cgaccagcg atcccccgg ccccgccga 
      gtacctgcg cgggaaggt cgatgtcga gagcgtcga 
      agacgtccc cagcagccc caagtcgcg ggtgaagtt 
      gtccaggtt ctggagcaa cggacaggt taacgtgaa 
      aaaccagag acaagccat ggacgatag catggtgaa 
      cacgtcttc cagtagttg tagtgttat ttgttcggc 
      ggaagccga ggagattgc aaggaggag ggctttcag 
      tcactatga ttgtcagtc gttgacgac gaatttgaa 
      ttacacggc caggttgag gcgaatttt ggccaagag 
      acggaacac gacaacggg ggcttcggc cgcctcgat 
      gttagccaa atcttttac ctcggatgg ggacagtgg 
      ggaggagga caacggtga tggacaaaa caacgatct 
      cgtgcagag ttgtccatt tttccgcaa cgaaatcgg 
      aggggaaga agaacgaat tgttagttt gaccagatt 
      gcaaagtag tcaagggtt aggcggcaa gaaaccttt 
      acatcgtcc accacttgc ttacggcgt tgccgtcct 
      agaattccc tccagggga aacgcactg gagacattc 
      cacttgtcc ctaccagcg cttacccag gcccattga 
      aagcgtcga tcagggcgc tttgtacta tcgaaagta 
      tttctacgg acaagagca ccagaattg gtttggaat 
      ggacgaaca actcggtcc cgtggcaat ttccatcag 
      acgcgagaa agtcctcca tcccgacaa ccagctctc 
      ttcatcttc aataatgca ataccaata ccggctcgt 
      aattcgtac ttccgagct ccaaacctt ccgtggagc 
      gattcttga ggatgccat tcccagcat taaggcatc 
      tagtagtag caaaacttt caacataaa ggaggttct 
      cgaatacgt cgctcccga aatccaatt gagctcgtt 
      acgattagg cgtccagaa ccagcaaac cgaagaaca 
      attactgaa attggacga gcaaggact taacaacca 
      ttacaaagt cggcgtaat gtattgcaa agcggacca 
      atcgtccga ggaggaaat gtacaataa cgaggaagc 
      cggtccagc tttcgtcga gtttctcga aactatcgg 
      gaaaaaagt caggcttaa aggcttcgc gaagtacaa 
      agctggact tgataacaa atccgactc caccggttt 
      atactccgt ctactcgca ataccagga ctgcgaaat 
      catgtttca cgtgtcgac catgctacc cttcacgcc 
      aaacaaccg gcaacagct cctccgcaa gcgccatat 
      cggcaacga catcgtcac gatagtgtt ccaagaacc 
      gggtgcctt acccttcac acccaaagg aatccggtc 
      gcagttcca acacgtctt catcgtagt ccaagcgat 
      taacccctg caccgaaaa cacccacta caaagtggc 
      cgtgagccg ctcaaagga cgtcgaagt gttcgggcc 
      tccgattaa agacggcgc catttttcc caaaggcaa 
      agccttcgc tgaatttct cttagccaa ggttgtgaa 
      cgccgaaaa tgccgccca ccgctcgga gaaattcgt 
      aacaatggc cacacgcac cagacaaga gtatttgaa 
      agagctggt gaccaacag ctcaacttc gacgccggt 
      ggacaccca ccagaagtt ttcgatttt cagcagcaa 
      aaagaagga taagattag gccacgctt tatacccga 
      tgcctgcca acgaggggc gattttgtg gcaggtttt 
      gctggatga cagtgggca atcacaacg aatcgaatg 
      cttcctagg cattagtac cgatagttt ggtcttgat 
      tgaagaaac atcgaagca aattgtgtt cgttacgcc 
      gtgtaagtc aatcctggg gtggtcgac tctttcgaa 
      cggcttgag aatttacca ccaccaggg cgaatgcat 
      gactataca catgaggga tggacaagg ggaccgtga 
      tgagttgat ggaggtgat gcagaggtt gcaagcagt 
      gactcaagg agtgttggc taaggagtt atccttgaa 
      acgcaacat catggggca gctgggttt ccacgtcca 
      acccgatgg cattgtaac cctggtcga gagttcggg 
      cgaagcctg gcatggagg cctacgcca gaattcccg 
      cctggtgga gatttgcaa agtcgcagt ttcgactct 
      gacctacga ccagatggt cgatcttct caaaacctc 
      gatcgttgt aactttaac tgtgatacc gcccttacc 
      cgacggctc ccctcgcaa gggctgcac tctacaaaa 
      ctgtaaata taacgaagg taactacga aggcgatta 
      cgagaattt ggatgatgg taagtcacg caaagcgcc 
      acagatgca acaagcggg caaccaccg gcggatcta 
      cgagaggag tttctcgcc accgagatc gagtaatag 
      ttccggtta cggtaccgg aagtagttc taaatcgtt 
      tcataatcc tgaaggaac cctcacgag ttcctcaag 
      cgggcattc gggggacga caagtggta cgacgtcct 
      gcaggagtt ggaggtacc accagtacc gcaaaaaac 
      accatcacg gaccaataa cacgttccc gacgccgaa 
      acgcaccaa ccaaatcca agtctcgca taatcactt 
      cggcccaca gcagataca tcacagtaa agtacaaat 
      cagtcattc gctgccgct gcaacacgt caattattc 
      gcaaccgtt gactgcggt cgttcacaa taacaccga 
      ctacgagag ttacaataa agagaaaaa caacgtgaa 
      acaacaaag cgattatgt catgagaca attgaacga 
      tttccggtt gaatgatgg acactcaac cgatagttc 
      catgtatgg ggggttagg gagcgagga tgagttgtc 
      caatggcag cggaaatgt gtctccgag aagtcgcag 
      ggcgaagca gttaacaag taatagtcg gaatcacag 
      tccgaggtc agtcaatgg tgaggctaa gctaagacc 
      tggtgttac ccccagatc ttcgaatag gaacagcgc 
      caatttatc gtcgagtaa ttttcaaga agagttgct 
      cagattgat aaatccgga cagtattga ggcttcaac 
      cgagccgaa agaaacgac cagtcattc cagttcgaa 
      tttatcgca caaaacgca gccggaggt gatcctgac 
      catggcccg cccagccac cgttatttc gaacgctag 
      caccacgtc cagccccct gcccgccga attcaaagg 
      ttccaaaga cgagctcaa taccaaaac aaaatcggt 
      cgtgtctct cgaagaata tccggttcc ggaggactg 
      gccgactct tgtggacac agctactcg agttttgat 
      gcaagtggc ttccgatag ttacaaacg tgacgaagg 
      gaaatggga cgaggaagc cccaattga cgcgtcaat 
      cacctcttc agttagttc cagtacgag tgtgccgga 
      gctgcagaa ccatgtgac ggatttaga gtcaagttt 
      gaagcgaga gacgcggag gagattgtc gttggagaa 
      cgaggtgag gcggctgaa ggaggagaa caagaaatt 
      gaaggatca agcacagag tgccgtgca gcagttgcg 
      caagtttac agagtggtt cttcaagaa cgtccaaag 
      gcagtaagc gtaaacttg taaataaat gttaaactt 
      gtaaatttt taatatagt acaaaattg ttgtattta 
      tttattgtt tgttttgtc ggaatttag cttcgtttc 
      gggtcagta ttcaaaatt ttcgttggg ttaaggtcc 
      acccttgag tattataag ttattcttc agttagtta 
      ccacacgag ttattattt aacctacac ttttaatca 
      ttattttac gaaatattt ttgttactt atagtactg 
      ttgtttact tagtacgta ttttaaaga atattctac 
      tctccgtaa cgataaaca actgaacac caaatcaaa 
      tgtaacgtt aattgctta gttctagtg ttatgatca 
      tccattcct gacaaatga ggagtattg ttgacggtg 
      acctgcgat tgccttatg aatggattt taaatattt 
      tatttaagc aacttgtta tgtaacgta atttttcca 
      tttactatg tcaatgttt atttaaaaa taaaaattc 
      tgaaactga
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY