Status
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Gene information
General information
TC031053
Former TC numbers

If one gene is splitted or genes are merged, the original TC numbers are listed. One listed former TC number indicates the previous gene has be splitted, serveral former TC number represents a merged gene.

TC002646,TC002645
Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007418.3: 16581344..16596887
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC031053
    Gene ontology

    GO terms for Tribolium

    • {{ goTerm.term }}
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      Status: {{ goTerm.status }}
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      Quotation: {{ goTerm.quotation }}
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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
    {{ blurIdResult }}
    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
      {{ unavailableText }}

    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_07036

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 0.0% (includes death as pupa, adult)

    Analysis of embryonic musculature and early development
    number of eggs/embryos/larvae on slide: > 50 embryo/egg with muscle fluorescence/pattern, but not hatched (pot. late embryonic lethality) - Penetrance (percentage of animals/eggs on slide): 30% - 50%

    larval musculature pattern irregular - Penetrance (percentage of animals/eggs on slide): 30% - 50%

    affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    remarks: muscle pattern potentially obscured by segmentation defect,
    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: > 50
    abdomen ventral circumference irregular - Penetrance (percentage of animals/eggs on slide): less than 30%

    affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): less than 30%
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)

    iBeetle screen iB_03430

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 30.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 1 (3 dpi)
    Days post injection


    adult lethality - Number of animals showing the phenotype: 2 (9 dpi)
    Days post injection


    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 20
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC031053 RA
      MYNTPTSKK QKPTTSYLV RPRLGAIRS IYSTKPMSS 
      YSQDKKKKL KKSLGKMEY KKKPDYADT AYREAVGRL 
      RILLAESYT PIKRPLREL DSAGEDTDN QSLISATSR 
      TSKGYRPYY QYLTMPPKR YHYYPSIRP TSVLPPETE 
      KNVMNAPKF EGSSAPPEL MSFIEKQEE YIEQLEKES 
      RFCRDELSC LLSKVKDVI SENENLHEK QKSNLMKSV 
      FSHLETETE TETDVDLAQ KMSLSPKKS KKTRVLEGP 
      TIVFESRIS ELEAQLTQA KIDLRKALE DNDNYKKKI 
      ADGTIFDGF GFEHYKKQI DALQREKDV LQETISKLQ 
      AALAKVRDK ENVTCDQVK RSLDVAEQA QYEKNAAEL 
      EIRRLKDEL ERQHSKLRD AISDQSRRI SDERSAVER 
      RYTQQIEQL TAELGVQWE TTNKLQLEL DKQRRENAD 
      LRREIAQKE ALLDGMRKD MQNKIMTLQ SDIGVNGAE 
      KSALEQQIA TLQMTNERN ERQSKQEIG RLQAEMQSL 
      RQRLDRADA DLIHSRREN IRLTEQVAS LEKEIKLNS 
      ALSEEKSKQ SSGEVLALP PPKEQDKQL SSLIQDMES 
      KHAATVAEL EGMIHSQNQ LMDKLSVEC HTLTQKLED 
      ASARHKEEI RELQTSLSR LNSRLLNQS QITSSRVKD 
      EDYNSPSNQ RTAPPKILS RSNSRSSVK PNPTLSRNN 
      SEDKTPSLQ NISDNRTYG SDQPHVGDA SDERNYIPE 
      DYQTDPNKE YDQYGNDPN QQYQMDPNQ QYATDPNQQ 
      YEMNPNAQY DESYGQYLN DPNVQYVED PNQQYEMNP 
      EQQEYVTDP NHPDQQYGT NQQQQEYVT DPNHPDQQY 
      GTNQQQQEY GTVKMPPKP KLHKNKGKS DLKFSPSTT 
      SSNTTETPP ESSNIATNP ELQEQFETE LCWCIQQLQ 
      RSINSGKLN QKQVLESTK VLNMLMNNT TPFIKKRQL 
      MRVTFGDYR AKMLEENKK MSKAINIKI SPASPSKKS 
      KFVKKSIFS STSDSNFKF NFDVENVED NLSENINKI 
      ELTTDNEPK PEAFHFRTS DNSFKFNFV PDES
    • >TC031053 RB
      MYNTPTSKK QKPTTSYLV RPRLGAIRS IYSTKPMSS 
      YSQDKKKKL KKSLGKMEY KKKPDYADT AYREAVGRL 
      RILLAESYT PIKRPLREL DSAGEDTDN QSLISATSR 
      TSKGYRPYY QYLTMPPKR YHYYPSIRP TSVLPPETE 
      KNVMNAPKF EGSSAPPEL MSFIEKQEE YIEQLEKES 
      RFCRDELSC LLSKVKDVI SENENLHEK QKSNLMKSV 
      FSHLETETE TETDVDLAQ KMSLSPKKS KKTRVLEGP 
      TIVFESRIS ELEAQLTQA KIDLRKALE DNDNYKKKI 
      ADGTIFDGF GFEHYKKQI DALQREKDV LQETISKLQ 
      AALAKVRDK ENVTCDQVK RSLDVAEQA QYEKNAAEL 
      EIRRLKDEL ERQHSKLRD AISDQSRRI SDERSAVER 
      RYTQQIEQL TAELGVQWE TTNKLQLEL DKQRRENAD 
      LRREIAQKE ALLDGMRKD MQNKIMTLQ SDIGVNGAE 
      KSALEQQIA TLQMTNERN ERQSKQEIG RLQAEMQSL 
      RQRLDRADA DLIHSRREN IRLTEQVAS LEKEIKLNS 
      ALSEEKSKQ SSGEVLALP PPKEQDKQL SSLIQDMES 
      KHAATVAEL EGMIHSQNQ LMDKLSVEC HTLTQKLED 
      ASARHKVKD EDYNSPSNQ RTAPPKILS RSNSRSSVK 
      PNPTLSRNN SEDKTPSLQ NISDNRTYG SDQPHVGDA 
      SDERNYIPE DYQTDPNKE YDQYGNDPN QQYQMDPNQ 
      QYATDPNQQ YEMNPNAQY DESYGQYLN DPNVQYVED 
      PNQQYEMNP EQQEYVTDP NHPDQQYGT NQQQQEYVT 
      DPNHPDQQY GTNQQQQEY GTVKMPPKP KLHKNKGKS 
      DLKFSPSTT SSNTTETPP ESSNIATNP ELQEQFETE 
      LCWCIQQLQ RSINSGKLN QKQVLESTK VLNMLMNNT 
      TPFIKKRQL MRVTFGDYR AKMLEENKK MSKAINIKI 
      SPASPSKKS KFVKKSIFS STSDSNFKF NFDVENVED 
      NLSENINKI ELTTDNEPK PEAFHFRTS DNSFKFNFV 
      PDES
    CDS sequence
    • >TC031053 RA
      atgtataac actccaaca agtaaaaaa caaaaacct 
      acaacaagt tacttggtt agaccaaga ttgggtgcc 
      atcagaagt atttattca accaaacca atgtcgtct 
      tatagtcaa gacaaaaag aaaaaactc aagaaatct 
      ctcggcaaa atggaatac aagaaaaag cccgattat 
      gccgacact gcgtatcgt gaagccgtt ggaagactt 
      cgtattctg ttagcagaa agttacaca ccaattaaa 
      agacctttg agggaatta gacagtgca ggagaagac 
      actgacaac caatctctc ataagcgct accagcaga 
      acgtcaaaa ggatatcgt ccgtactat cagtacctc 
      acaatgcct ccaaagcgg tatcactac tatccttcc 
      ataagaccg acaagtgta ctaccacca gagaccgaa 
      aaaaatgtc atgaatgcg ccaaaattt gaaggcagt 
      tctgcgccg ccagagtta atgtctttt atagaaaaa 
      caagaggag tatattgag caactggaa aaagaatca 
      agattttgc agagatgaa ttatcatgt ttgctgagc 
      aaagtcaaa gatgttata agtgaaaat gagaatttg 
      cacgaaaag cagaaatcg aatttaatg aagtcggtt 
      ttcagtcac ttggagacg gaaacggaa accgaaact 
      gacgtggat ttagcccaa aagatgtca ttatcgcct 
      aaaaaatcg aaaaaaact cgagtactg gaaggcccc 
      acaatcgtt tttgaatca cgaatttcc gaactagaa 
      gcccaactg acccaagca aaaatcgat ttaagaaaa 
      gctttggaa gataacgac aactacaag aaaaaaatt 
      gccgacgga acgattttt gacggattt ggtttcgag 
      cattacaag aaacaaatc gatgcattg cagagagaa 
      aaagatgtt ttgcaagaa accatttcc aagcttcaa 
      gcagcttta gccaaagtt cgagacaaa gaaaacgtt 
      acttgcgat caagttaag agaagcttg gatgttgca 
      gaacaagca caatatgaa aaaaatgct gcggaactt 
      gaaatccga agacttaaa gacgaactg gagcgccaa 
      cactccaaa ctcagagac gcaatttca gatcagagt 
      cgacgaatc tcagatgag agaagtgct gttgaacgt 
      cgatacaca caacaaatc gagcaattg accgccgaa 
      ttgggggtt caatgggag actacaaac aaactccaa 
      ctggagttg gataagcaa agaagagaa aatgcagat 
      ttgagaagg gaaatagca cagaaagag gcactgctt 
      gatggcatg cgaaaagac atgcaaaat aaaattatg 
      actttgcag tcggatatt ggagtcaac ggagccgaa 
      aaaagtgcc ctcgaacag caaattgca acccttcag 
      atgaccaac gagcggaat gaacgacaa tcaaagcag 
      gaaatcgga cgtttgcag gccgagatg cagtctctg 
      agacagaga ttggaccga gcagatgct gatctcatc 
      cacagcaga cgggaaaac attcgactc actgaacaa 
      gtggcttct ttggaaaaa gaaattaaa ctcaactct 
      gcgttgagt gaagagaag agcaaacag tcgagtggc 
      gaagttctg gctcttcct ccgcccaaa gagcaagac 
      aagcagttg tcttccctc atccaagac atggagtct 
      aaacacgcg gctactgta gccgaactc gaaggcatg 
      atccattcc caaaatcaa ctcatggac aaattgtca 
      gtcgaatgt cacactctt acccagaag ctggaagac 
      gccagcgca aggcataag gaggaaata cgggaacta 
      caaactagc ctaagtcga ttaaatagt agattgtta 
      aatcagtca caaattacc tcctccaga gtcaaagat 
      gaggactat aattcccct agcaatcaa agaactgca 
      ccaccaaaa atcttgagc cgttccaat agtcgatca 
      tccgttaaa ccaaacccc actttatca agaaataac 
      agcgaagac aaaacacca tcactccaa aatatttcc 
      gataacaga acatacgga tctgatcaa ccccatgtt 
      ggtgatgct tcggacgag agaaattat attccagaa 
      gattatcaa acggatccc aataaagag tacgatcag 
      tacggaaat gatccaaat cagcagtac caaatggat 
      ccaaatcaa cagtatgca actgatccg aatcagcaa 
      tacgaaatg aatccaaat gcacaatat gatgagtcc 
      tacggacaa tacttgaat gatccgaat gttcaatat 
      gtcgaggat ccgaatcaa cagtatgaa atgaatcca 
      gaacagcaa gagtatgtg acagatccg aatcatccg 
      gatcaacag tatggaacg aatcagcaa cagcaagag 
      tatgtgacg gatccgaat catcctgat caacagtac 
      ggaacgaat caacaacag caagagtat ggaaccgtg 
      aaaatgcct ccaaaaccg aaactccac aaaaacaaa 
      ggcaaaagt gatttaaaa ttttctcca agtactaca 
      agttcaaat acaacagaa acaccaccg gagtcatcg 
      aatattgcc actaatccg gaattacaa gagcaattt 
      gaaacggaa ctttgctgg tgtattcag caattgcaa 
      aggagcatt aattctggt aaactgaat caaaaacaa 
      gtgttagaa agtactaaa gtgttaaac atgttgatg 
      aataatacg acacctttc ataaaaaag cgtcaactt 
      atgagggtt acatttggt gattataga gcaaaaatg 
      ttggaagaa aataaaaaa atgtcaaaa gcaatcaac 
      ataaagata tcaccggct tcccctagt aaaaaatca 
      aaatttgta aaaaaatct atattttcg tcaacatct 
      gacagtaat tttaaattc aacttcgac gtggaaaat 
      gttgaggat aatttatcc gagaatata aacaagatt 
      gaattaact acggacaac gaacctaag ccagaggca 
      tttcatttt aggacatct gacaattca tttaaattt 
      aatttcgtt cctgatgaa agctaa
    • >TC031053 RB
      atgtataac actccaaca agtaaaaaa caaaaacct 
      acaacaagt tacttggtt agaccaaga ttgggtgcc 
      atcagaagt atttattca accaaacca atgtcgtct 
      tatagtcaa gacaaaaag aaaaaactc aagaaatct 
      ctcggcaaa atggaatac aagaaaaag cccgattat 
      gccgacact gcgtatcgt gaagccgtt ggaagactt 
      cgtattctg ttagcagaa agttacaca ccaattaaa 
      agacctttg agggaatta gacagtgca ggagaagac 
      actgacaac caatctctc ataagcgct accagcaga 
      acgtcaaaa ggatatcgt ccgtactat cagtacctc 
      acaatgcct ccaaagcgg tatcactac tatccttcc 
      ataagaccg acaagtgta ctaccacca gagaccgaa 
      aaaaatgtc atgaatgcg ccaaaattt gaaggcagt 
      tctgcgccg ccagagtta atgtctttt atagaaaaa 
      caagaggag tatattgag caactggaa aaagaatca 
      agattttgc agagatgaa ttatcatgt ttgctgagc 
      aaagtcaaa gatgttata agtgaaaat gagaatttg 
      cacgaaaag cagaaatcg aatttaatg aagtcggtt 
      ttcagtcac ttggagacg gaaacggaa accgaaact 
      gacgtggat ttagcccaa aagatgtca ttatcgcct 
      aaaaaatcg aaaaaaact cgagtactg gaaggcccc 
      acaatcgtt tttgaatca cgaatttcc gaactagaa 
      gcccaactg acccaagca aaaatcgat ttaagaaaa 
      gctttggaa gataacgac aactacaag aaaaaaatt 
      gccgacgga acgattttt gacggattt ggtttcgag 
      cattacaag aaacaaatc gatgcattg cagagagaa 
      aaagatgtt ttgcaagaa accatttcc aagcttcaa 
      gcagcttta gccaaagtt cgagacaaa gaaaacgtt 
      acttgcgat caagttaag agaagcttg gatgttgca 
      gaacaagca caatatgaa aaaaatgct gcggaactt 
      gaaatccga agacttaaa gacgaactg gagcgccaa 
      cactccaaa ctcagagac gcaatttca gatcagagt 
      cgacgaatc tcagatgag agaagtgct gttgaacgt 
      cgatacaca caacaaatc gagcaattg accgccgaa 
      ttgggggtt caatgggag actacaaac aaactccaa 
      ctggagttg gataagcaa agaagagaa aatgcagat 
      ttgagaagg gaaatagca cagaaagag gcactgctt 
      gatggcatg cgaaaagac atgcaaaat aaaattatg 
      actttgcag tcggatatt ggagtcaac ggagccgaa 
      aaaagtgcc ctcgaacag caaattgca acccttcag 
      atgaccaac gagcggaat gaacgacaa tcaaagcag 
      gaaatcgga cgtttgcag gccgagatg cagtctctg 
      agacagaga ttggaccga gcagatgct gatctcatc 
      cacagcaga cgggaaaac attcgactc actgaacaa 
      gtggcttct ttggaaaaa gaaattaaa ctcaactct 
      gcgttgagt gaagagaag agcaaacag tcgagtggc 
      gaagttctg gctcttcct ccgcccaaa gagcaagac 
      aagcagttg tcttccctc atccaagac atggagtct 
      aaacacgcg gctactgta gccgaactc gaaggcatg 
      atccattcc caaaatcaa ctcatggac aaattgtca 
      gtcgaatgt cacactctt acccagaag ctggaagac 
      gccagcgca aggcataaa gtcaaagat gaggactat 
      aattcccct agcaatcaa agaactgca ccaccaaaa 
      atcttgagc cgttccaat agtcgatca tccgttaaa 
      ccaaacccc actttatca agaaataac agcgaagac 
      aaaacacca tcactccaa aatatttcc gataacaga 
      acatacgga tctgatcaa ccccatgtt ggtgatgct 
      tcggacgag agaaattat attccagaa gattatcaa 
      acggatccc aataaagag tacgatcag tacggaaat 
      gatccaaat cagcagtac caaatggat ccaaatcaa 
      cagtatgca actgatccg aatcagcaa tacgaaatg 
      aatccaaat gcacaatat gatgagtcc tacggacaa 
      tacttgaat gatccgaat gttcaatat gtcgaggat 
      ccgaatcaa cagtatgaa atgaatcca gaacagcaa 
      gagtatgtg acagatccg aatcatccg gatcaacag 
      tatggaacg aatcagcaa cagcaagag tatgtgacg 
      gatccgaat catcctgat caacagtac ggaacgaat 
      caacaacag caagagtat ggaaccgtg aaaatgcct 
      ccaaaaccg aaactccac aaaaacaaa ggcaaaagt 
      gatttaaaa ttttctcca agtactaca agttcaaat 
      acaacagaa acaccaccg gagtcatcg aatattgcc 
      actaatccg gaattacaa gagcaattt gaaacggaa 
      ctttgctgg tgtattcag caattgcaa aggagcatt 
      aattctggt aaactgaat caaaaacaa gtgttagaa 
      agtactaaa gtgttaaac atgttgatg aataatacg 
      acacctttc ataaaaaag cgtcaactt atgagggtt 
      acatttggt gattataga gcaaaaatg ttggaagaa 
      aataaaaaa atgtcaaaa gcaatcaac ataaagata 
      tcaccggct tcccctagt aaaaaatca aaatttgta 
      aaaaaatct atattttcg tcaacatct gacagtaat 
      tttaaattc aacttcgac gtggaaaat gttgaggat 
      aatttatcc gagaatata aacaagatt gaattaact 
      acggacaac gaacctaag ccagaggca tttcatttt 
      aggacatct gacaattca tttaaattt aatttcgtt 
      cctgatgaa agctaa
    mRNA sequence
    • >TC031053 RA
      atcttctca tgtcataca caatgtata acactccaa 
      caagtaaaa aacaaaaac ctacaacaa gttacttgg 
      ttagaccaa gattgggtg ccatcagaa gtatttatt 
      caaccaaac caatgtcgt cttatagtc aagacaaaa 
      agaaaaaac tcaagaaat ctctcggca aaatggaat 
      acaagaaaa agcccgatt atgccgaca ctgcgtatc 
      gtgaagccg ttggaagac ttcgtattc tgttagcag 
      aaagttaca caccaatta aaagacctt tgagggaat 
      tagacagtg caggagaag acactgaca accaatctc 
      tcataagcg ctaccagca gaacgtcaa aaggatatc 
      gtccgtact atcagtacc tcacaatgc ctccaaagc 
      ggtatcact actatcctt ccataagac cgacaagtg 
      tactaccac cagagaccg aaaaaaatg tcatgaatg 
      cgccaaaat ttgaaggca gttctgcgc cgccagagt 
      taatgtctt ttatagaaa aacaagagg agtatattg 
      agcaactgg aaaaagaat caagatttt gcagagatg 
      aattatcat gtttgctga gcaaagtca aagatgtta 
      taagtgaaa atgagaatt tgcacgaaa agcagaaat 
      cgaatttaa tgaagtcgg ttttcagtc acttggaga 
      cggaaacgg aaaccgaaa ctgacgtgg atttagccc 
      aaaagatgt cattatcgc ctaaaaaat cgaaaaaaa 
      ctcgagtac tggaaggcc ccacaatcg tttttgaat 
      cacgaattt ccgaactag aagcccaac tgacccaag 
      caaaaatcg atttaagaa aagctttgg aagataacg 
      acaactaca agaaaaaaa ttgccgacg gaacgattt 
      ttgacggat ttggtttcg agcattaca agaaacaaa 
      tcgatgcat tgcagagag aaaaagatg ttttgcaag 
      aaaccattt ccaagcttc aagcagctt tagccaaag 
      ttcgagaca aagaaaacg ttacttgcg atcaagtta 
      agagaagct tggatgttg cagaacaag cacaatatg 
      aaaaaaatg ctgcggaac ttgaaatcc gaagactta 
      aagacgaac tggagcgcc aacactcca aactcagag 
      acgcaattt cagatcaga gtcgacgaa tctcagatg 
      agagaagtg ctgttgaac gtcgataca cacaacaaa 
      tcgagcaat tgaccgccg aattggggg ttcaatggg 
      agactacaa acaaactcc aactggagt tggataagc 
      aaagaagag aaaatgcag atttgagaa gggaaatag 
      cacagaaag aggcactgc ttgatggca tgcgaaaag 
      acatgcaaa ataaaatta tgactttgc agtcggata 
      ttggagtca acggagccg aaaaaagtg ccctcgaac 
      agcaaattg caacccttc agatgacca acgagcgga 
      atgaacgac aatcaaagc aggaaatcg gacgtttgc 
      aggccgaga tgcagtctc tgagacaga gattggacc 
      gagcagatg ctgatctca tccacagca gacgggaaa 
      acattcgac tcactgaac aagtggctt ctttggaaa 
      aagaaatta aactcaact ctgcgttga gtgaagaga 
      agagcaaac agtcgagtg gcgaagttc tggctcttc 
      ctccgccca aagagcaag acaagcagt tgtcttccc 
      tcatccaag acatggagt ctaaacacg cggctactg 
      tagccgaac tcgaaggca tgatccatt cccaaaatc 
      aactcatgg acaaattgt cagtcgaat gtcacactc 
      ttacccaga agctggaag acgccagcg caaggcata 
      aggaggaaa tacgggaac tacaaacta gcctaagtc 
      gattaaata gtagattgt taaatcagt cacaaatta 
      cctcctcca gagtcaaag atgaggact ataattccc 
      ctagcaatc aaagaactg caccaccaa aaatcttga 
      gccgttcca atagtcgat catccgtta aaccaaacc 
      ccactttat caagaaata acagcgaag acaaaacac 
      catcactcc aaaatattt ccgataaca gaacatacg 
      gatctgatc aaccccatg ttggtgatg cttcggacg 
      agagaaatt atattccag aagattatc aaacggatc 
      ccaataaag agtacgatc agtacggaa atgatccaa 
      atcagcagt accaaatgg atccaaatc aacagtatg 
      caactgatc cgaatcagc aatacgaaa tgaatccaa 
      atgcacaat atgatgagt cctacggac aatacttga 
      atgatccga atgttcaat atgtcgagg atccgaatc 
      aacagtatg aaatgaatc cagaacagc aagagtatg 
      tgacagatc cgaatcatc cggatcaac agtatggaa 
      cgaatcagc aacagcaag agtatgtga cggatccga 
      atcatcctg atcaacagt acggaacga atcaacaac 
      agcaagagt atggaaccg tgaaaatgc ctccaaaac 
      cgaaactcc acaaaaaca aaggcaaaa gtgatttaa 
      aattttctc caagtacta caagttcaa atacaacag 
      aaacaccac cggagtcat cgaatattg ccactaatc 
      cggaattac aagagcaat ttgaaacgg aactttgct 
      ggtgtattc agcaattgc aaaggagca ttaattctg 
      gtaaactga atcaaaaac aagtgttag aaagtacta 
      aagtgttaa acatgttga tgaataata cgacacctt 
      tcataaaaa agcgtcaac ttatgaggg ttacatttg 
      gtgattata gagcaaaaa tgttggaag aaaataaaa 
      aaatgtcaa aagcaatca acataaaga tatcaccgg 
      cttccccta gtaaaaaat caaaatttg taaaaaaat 
      ctatatttt cgtcaacat ctgacagta attttaaat 
      tcaacttcg acgtggaaa atgttgagg ataatttat 
      ccgagaata taaacaaga ttgaattaa ctacggaca 
      acgaaccta agccagagg catttcatt ttaggacat 
      ctgacaatt catttaaat ttaatttcg ttcctgatg 
      aaagctaaa atttagttt aaataaata ataattaag 
      aac
    • >TC031053 RB
      atcttctca tgtcataca caatgtata acactccaa 
      caagtaaaa aacaaaaac ctacaacaa gttacttgg 
      ttagaccaa gattgggtg ccatcagaa gtatttatt 
      caaccaaac caatgtcgt cttatagtc aagacaaaa 
      agaaaaaac tcaagaaat ctctcggca aaatggaat 
      acaagaaaa agcccgatt atgccgaca ctgcgtatc 
      gtgaagccg ttggaagac ttcgtattc tgttagcag 
      aaagttaca caccaatta aaagacctt tgagggaat 
      tagacagtg caggagaag acactgaca accaatctc 
      tcataagcg ctaccagca gaacgtcaa aaggatatc 
      gtccgtact atcagtacc tcacaatgc ctccaaagc 
      ggtatcact actatcctt ccataagac cgacaagtg 
      tactaccac cagagaccg aaaaaaatg tcatgaatg 
      cgccaaaat ttgaaggca gttctgcgc cgccagagt 
      taatgtctt ttatagaaa aacaagagg agtatattg 
      agcaactgg aaaaagaat caagatttt gcagagatg 
      aattatcat gtttgctga gcaaagtca aagatgtta 
      taagtgaaa atgagaatt tgcacgaaa agcagaaat 
      cgaatttaa tgaagtcgg ttttcagtc acttggaga 
      cggaaacgg aaaccgaaa ctgacgtgg atttagccc 
      aaaagatgt cattatcgc ctaaaaaat cgaaaaaaa 
      ctcgagtac tggaaggcc ccacaatcg tttttgaat 
      cacgaattt ccgaactag aagcccaac tgacccaag 
      caaaaatcg atttaagaa aagctttgg aagataacg 
      acaactaca agaaaaaaa ttgccgacg gaacgattt 
      ttgacggat ttggtttcg agcattaca agaaacaaa 
      tcgatgcat tgcagagag aaaaagatg ttttgcaag 
      aaaccattt ccaagcttc aagcagctt tagccaaag 
      ttcgagaca aagaaaacg ttacttgcg atcaagtta 
      agagaagct tggatgttg cagaacaag cacaatatg 
      aaaaaaatg ctgcggaac ttgaaatcc gaagactta 
      aagacgaac tggagcgcc aacactcca aactcagag 
      acgcaattt cagatcaga gtcgacgaa tctcagatg 
      agagaagtg ctgttgaac gtcgataca cacaacaaa 
      tcgagcaat tgaccgccg aattggggg ttcaatggg 
      agactacaa acaaactcc aactggagt tggataagc 
      aaagaagag aaaatgcag atttgagaa gggaaatag 
      cacagaaag aggcactgc ttgatggca tgcgaaaag 
      acatgcaaa ataaaatta tgactttgc agtcggata 
      ttggagtca acggagccg aaaaaagtg ccctcgaac 
      agcaaattg caacccttc agatgacca acgagcgga 
      atgaacgac aatcaaagc aggaaatcg gacgtttgc 
      aggccgaga tgcagtctc tgagacaga gattggacc 
      gagcagatg ctgatctca tccacagca gacgggaaa 
      acattcgac tcactgaac aagtggctt ctttggaaa 
      aagaaatta aactcaact ctgcgttga gtgaagaga 
      agagcaaac agtcgagtg gcgaagttc tggctcttc 
      ctccgccca aagagcaag acaagcagt tgtcttccc 
      tcatccaag acatggagt ctaaacacg cggctactg 
      tagccgaac tcgaaggca tgatccatt cccaaaatc 
      aactcatgg acaaattgt cagtcgaat gtcacactc 
      ttacccaga agctggaag acgccagcg caaggcata 
      aagtcaaag atgaggact ataattccc ctagcaatc 
      aaagaactg caccaccaa aaatcttga gccgttcca 
      atagtcgat catccgtta aaccaaacc ccactttat 
      caagaaata acagcgaag acaaaacac catcactcc 
      aaaatattt ccgataaca gaacatacg gatctgatc 
      aaccccatg ttggtgatg cttcggacg agagaaatt 
      atattccag aagattatc aaacggatc ccaataaag 
      agtacgatc agtacggaa atgatccaa atcagcagt 
      accaaatgg atccaaatc aacagtatg caactgatc 
      cgaatcagc aatacgaaa tgaatccaa atgcacaat 
      atgatgagt cctacggac aatacttga atgatccga 
      atgttcaat atgtcgagg atccgaatc aacagtatg 
      aaatgaatc cagaacagc aagagtatg tgacagatc 
      cgaatcatc cggatcaac agtatggaa cgaatcagc 
      aacagcaag agtatgtga cggatccga atcatcctg 
      atcaacagt acggaacga atcaacaac agcaagagt 
      atggaaccg tgaaaatgc ctccaaaac cgaaactcc 
      acaaaaaca aaggcaaaa gtgatttaa aattttctc 
      caagtacta caagttcaa atacaacag aaacaccac 
      cggagtcat cgaatattg ccactaatc cggaattac 
      aagagcaat ttgaaacgg aactttgct ggtgtattc 
      agcaattgc aaaggagca ttaattctg gtaaactga 
      atcaaaaac aagtgttag aaagtacta aagtgttaa 
      acatgttga tgaataata cgacacctt tcataaaaa 
      agcgtcaac ttatgaggg ttacatttg gtgattata 
      gagcaaaaa tgttggaag aaaataaaa aaatgtcaa 
      aagcaatca acataaaga tatcaccgg cttccccta 
      gtaaaaaat caaaatttg taaaaaaat ctatatttt 
      cgtcaacat ctgacagta attttaaat tcaacttcg 
      acgtggaaa atgttgagg ataatttat ccgagaata 
      taaacaaga ttgaattaa ctacggaca acgaaccta 
      agccagagg catttcatt ttaggacat ctgacaatt 
      catttaaat ttaatttcg ttcctgatg aaagctaaa 
      atttagttt aaataaata ataattaag aac
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY