Status
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Gene information
General information
TC005170 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007416.3: 4642273..4648190
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    		TC005170
    Gene ontology

    GO terms for Tribolium

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      Status: {{ goTerm.status }}
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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes

    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
    {{ blurIdResult }}
    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
      {{ unavailableText }}

    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_06595

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 50.0% (includes death as pupa, adult)

    eclosion not fulfilled (died as pupa) - Number of animals showing the phenotype: 1 (3 dpi)
    Days post injection

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 2 (3 dpi)
    Days post injection

    adult lethality - Number of animals showing the phenotype: 2 (9 dpi)
    Days post injection

    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 20
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)

    iBeetle screen iB_03914

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 50.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 1 (3 dpi)
    Days post injection

    adult lethality - Number of animals showing the phenotype: 4 (9 dpi)
    Days post injection

    Fertility
    ovary without detectable defects - Number of animals showing the phenotype: 4
    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 20
    4
    embryo/egg without visible larval cuticle in cuticle preparation - Penetrance (percentage of animals/eggs on slide): more than 80%
    affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): more than 80%
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC005170 RA
      MPVDKLHSE YRSTYRWHE YTGPRQEVV RRPPQPNAA 
PNAGDTQHS SKEDEVHNE LPKLEPAMP RRKKYPDLA 
YRHHEFLIS DGEITANGV CNTEPRARS EERGAHWRP 
SRRSKSEGP RGGGGHGDG MRERERRRE SDPDLENMG 
RETGLLRKA ISKISTEYR LQFAWPQGH TSRRDAVDS 
SAPRKSQSM GALKPATNA MVHKKRIDL ENKDASELE 
PLVDERNTR EDKTHIFKD EFNSEYKKN FRPFSQYEY 
SEGRFTKRG APVDDTDNS AGQNSLPPQ CEKNDSWYR 
EVVELRKKA GEYKHRGWG SELAPDRLS DIYNKQVEL 
WDQVSRRSS LSALSLASM THKSYTKEE KEVDNNNKT 
SPSKAARNA ENSARIVRD MIRHHLERT TGGSEFDGL 
ILSPTREKL EPTIPRKDD DSRSSQKNS PKKHSPMKS 
SSLKRHNQK APKSGPKNL RSQSVGPVT DTTEKRSPK 
RQSRSATVK ERKSSANQA SIKRPRPSS LNTTVSSRS 
KHSSVPSKT EDDRLAKAN SKSNTKQKL GTKQLEKGN 
SGADPPKTE ANEEVKNAP VEAPEIIDY EPVVKSPPE 
PTRVKSPEQ ILMRSPDPV NWTVPLDTG KTFTVTQNV 
REGDMSSRP HSEVKAWTP PDVPLPIAQ SAPPTLDQN 
KEQGMSYGF SSESMNSGQ GRVIAAQLR DLQPTVEHL 
RPRSIADAS FNRVVARKC RNGHGFVTP WCMFARTEQ 
GTYTTASRH LLNLI
    • >TC005170 RB
      MPVDKLHSE YRSTYRWHE YTGPRQEVV RRPPQPNAA 
PNAVPKLEP AMPRRKKYP DLAYRHHEF LISDGEITA 
NGVCNTEPR ARSEERGAH WRPSRRSKS EGPRGGGGH 
GDGMRERER RRESDPDLE NMGRETGLL RKAISKIST 
EYRLQFAWP QGHTSRRDA VDSSAPRKS QSMGALKPA 
TNAMVHKKR IDLENKDAS ELEPLVDER NTREDKTHI 
FKDEFNSEY KKNFRPFSQ YEYSEGRFT KRGAPVDDT 
DNSAGQNSL PPQCEKNDS WYREVVELR KKAGEYKHR 
GWGSELAPD RLSDIYNKQ VELWDQVSR RSSLSALSL 
ASMTHKSYT KEEKEVDNN NKTSPSKAA RNAENSARI 
VRDMIRHHL ERTTGGSEF DGLILSPTR EKLEPTIPR 
KDDDSRSSQ KNSPKKHSP MKSSSLKRH NQKAPKSGP 
KNLRSQSVG PVTDTTEKR SPKRQSRSA TVKERKSSA 
NQASIKRPR PSSLNTTVS SRSKHSSVP SKTEDDRLA 
KANSKSNTK QKLGTKQLE KGNSGADPP KTEANEEVK 
NAPVEAPEI IDYEPVVKS PPEPTRVKS PEQILMRSP 
DPVNWTVPL DTGKTFTVT QNVREGDMS SRPHSEVKA 
WTPPDVPLP IAQSAPPTL DQNKEQGMS YGFSSESMN 
SGQGRVIAA QLRDLQPTV EHLRPRSIA DASFNRVVA 
RKCRNGHGF VTPWCMFAR TEQGTYTTA SRHLLNLI
    CDS sequence
    • >TC005170 RA
      atgcctgtc gataagctg cactccgag taccggagt 
acttaccga tggcacgag tacacgggg cccaggcag 
gaggtcgtg cggaggcca ccgcagccc aacgccgct 
ccgaacgcc ggcgacact cagcactcc tccaaggag 
gatgaggtg cataatgag ctgcccaag ctggaaccg 
gcgatgcct aggaggaag aagtatccc gacttggcc 
taccgccac cacgagttt ctgatcagt gatggcgaa 
atcaccgcg aatggggtg tgcaacacg gaacctagg 
gctcggtcg gaggagcgt ggggcgcac tggaggcct 
tcccggcgg agcaagtcg gagggaccg cgtggcggc 
ggcggccac ggggacggc atgcgggag cgggagcgg 
cgtagggaa tcggacccg gatttggag aacatggga 
cgcgaaact gggcttctc cggaaggcc atttcaaaa 
attagcact gaatacaga ctgcaattc gcttggcct 
cagggccat acttcacgt agagatgcc gtcgattcc 
tcggcacct cgcaaatcc caatcgatg ggagcgcta 
aaaccggcc accaatgca atggtgcac aaaaaacgc 
atcgatttg gaaaataag gatgccagt gaactcgaa 
ccattagtc gatgaaaga aacacacgt gaagacaag 
actcacata ttcaaggat gaattcaat tccgaatac 
aagaagaac ttcagacct ttctcccag tatgaatac 
tcggaagga cgcttcacc aaacgggga gctcccgtc 
gatgacacc gataactcg gccggacaa aactcgcta 
ccgcctcaa tgcgagaag aacgactct tggtacagg 
gaagtcgtc gaattgcga aaaaaggca ggagaatat 
aagcaccgc ggttggggt agtgaactt gctccagat 
aggctttct gatatatac aataagcaa gttgaactt 
tgggatcaa gtttcacgg agaagttct ctatcagcc 
ttatctctc gcttccatg acacacaag tcttataca 
aaagaagag aaggaagta gataataac aacaagact 
tctccatcg aaagcggct cgcaatgct gaaaactca 
gctcgaatt gtacgagat atgatcaga catcattta 
gaacgaaca actggtggt tcagaattt gacggtttg 
attctgtcg ccgactaga gagaaactc gaaccgact 
ataccacgc aaagatgat gattcgaga agttcgcaa 
aagaacagc cccaagaaa cactcgccg atgaaatca 
tcatctttg aagcgacat aaccagaaa gcccccaaa 
agcggtcct aagaaccta cgttcccag tctgttggt 
cctgtgact gatacgact gaaaaacgg tcaccaaag 
cgccagtca cggtctgcc accgtcaaa gagcgaaaa 
tcttcggca aatcaagct agcatcaaa agacctcga 
ccttcatcc ttgaacact actgtctca tcccgatct 
aaacatagc tcggtaccc tctaaaacc gaagacgac 
agattggcc aaagctaat tcaaaatct aacactaag 
caaaaacta ggcactaaa cagttagaa aaaggaaat 
tctggagcc gacccaccc aagaccgaa gctaacgaa 
gaagtgaag aacgcccca gtcgaagca cccgaaata 
atcgattac gagccggtg gtaaagtcg ccgccggaa 
ccgactagg gtgaaatct cccgaacaa attctgatg 
cgttccccg gatcctgtc aactggact gtgccactc 
gacaccgga aaaactttt actgtcaca caaaacgtc 
agggagggg gatatgagt agtcgaccc catagcgaa 
gtgaaagcc tggactccc ccagacgtg ccccttccc 
atcgcccag tctgctcct ccgactctt gatcaaaat 
aaggaacaa ggcatgtcg tatggattt agcagtgaa 
agcatgaac tcgggccag ggcagagtc atcgctgca 
cagctgaga gacctccaa ccaacggta gagcatcta 
aggccacgt tccatcgca gatgcatct ttcaacagg 
gtagtagcc agaaagtgt cggaatggc cacggtttt 
gtaactccg tggtgtatg ttcgcaagg actgaacaa 
gggacatac accacggct tcgcgccat ttgctgaac 
cttatttga
    • >TC005170 RB
      atgcctgtc gataagctg cactccgag taccggagt 
acttaccga tggcacgag tacacgggg cccaggcag 
gaggtcgtg cggaggcca ccgcagccc aacgccgct 
ccgaacgcc gtgcccaag ctggaaccg gcgatgcct 
aggaggaag aagtatccc gacttggcc taccgccac 
cacgagttt ctgatcagt gatggcgaa atcaccgcg 
aatggggtg tgcaacacg gaacctagg gctcggtcg 
gaggagcgt ggggcgcac tggaggcct tcccggcgg 
agcaagtcg gagggaccg cgtggcggc ggcggccac 
ggggacggc atgcgggag cgggagcgg cgtagggaa 
tcggacccg gatttggag aacatggga cgcgaaact 
gggcttctc cggaaggcc atttcaaaa attagcact 
gaatacaga ctgcaattc gcttggcct cagggccat 
acttcacgt agagatgcc gtcgattcc tcggcacct 
cgcaaatcc caatcgatg ggagcgcta aaaccggcc 
accaatgca atggtgcac aaaaaacgc atcgatttg 
gaaaataag gatgccagt gaactcgaa ccattagtc 
gatgaaaga aacacacgt gaagacaag actcacata 
ttcaaggat gaattcaat tccgaatac aagaagaac 
ttcagacct ttctcccag tatgaatac tcggaagga 
cgcttcacc aaacgggga gctcccgtc gatgacacc 
gataactcg gccggacaa aactcgcta ccgcctcaa 
tgcgagaag aacgactct tggtacagg gaagtcgtc 
gaattgcga aaaaaggca ggagaatat aagcaccgc 
ggttggggt agtgaactt gctccagat aggctttct 
gatatatac aataagcaa gttgaactt tgggatcaa 
gtttcacgg agaagttct ctatcagcc ttatctctc 
gcttccatg acacacaag tcttataca aaagaagag 
aaggaagta gataataac aacaagact tctccatcg 
aaagcggct cgcaatgct gaaaactca gctcgaatt 
gtacgagat atgatcaga catcattta gaacgaaca 
actggtggt tcagaattt gacggtttg attctgtcg 
ccgactaga gagaaactc gaaccgact ataccacgc 
aaagatgat gattcgaga agttcgcaa aagaacagc 
cccaagaaa cactcgccg atgaaatca tcatctttg 
aagcgacat aaccagaaa gcccccaaa agcggtcct 
aagaaccta cgttcccag tctgttggt cctgtgact 
gatacgact gaaaaacgg tcaccaaag cgccagtca 
cggtctgcc accgtcaaa gagcgaaaa tcttcggca 
aatcaagct agcatcaaa agacctcga ccttcatcc 
ttgaacact actgtctca tcccgatct aaacatagc 
tcggtaccc tctaaaacc gaagacgac agattggcc 
aaagctaat tcaaaatct aacactaag caaaaacta 
ggcactaaa cagttagaa aaaggaaat tctggagcc 
gacccaccc aagaccgaa gctaacgaa gaagtgaag 
aacgcccca gtcgaagca cccgaaata atcgattac 
gagccggtg gtaaagtcg ccgccggaa ccgactagg 
gtgaaatct cccgaacaa attctgatg cgttccccg 
gatcctgtc aactggact gtgccactc gacaccgga 
aaaactttt actgtcaca caaaacgtc agggagggg 
gatatgagt agtcgaccc catagcgaa gtgaaagcc 
tggactccc ccagacgtg ccccttccc atcgcccag 
tctgctcct ccgactctt gatcaaaat aaggaacaa 
ggcatgtcg tatggattt agcagtgaa agcatgaac 
tcgggccag ggcagagtc atcgctgca cagctgaga 
gacctccaa ccaacggta gagcatcta aggccacgt 
tccatcgca gatgcatct ttcaacagg gtagtagcc 
agaaagtgt cggaatggc cacggtttt gtaactccg 
tggtgtatg ttcgcaagg actgaacaa gggacatac 
accacggct tcgcgccat ttgctgaac cttatttga
    mRNA sequence
    • >TC005170 RA
      aaacgctcg agatttgac gaattttgt tgccacacg 
acggcgtca gcccgcatt gctgtggct taattaatt 
atgcaaggg agctttcgt gttcacttt ttattcaaa 
agccccaaa tgtcgagta tgacgtcgc tggaagaaa 
atttttggt tcgcattaa tcaaccggc gactgcact 
caacagatt cagaagtgc aacgctatg ttgcattat 
gttgtgcgg atgtgaaaa agcaatgca atttacggt 
tttctgtgt taaatccaa aaaaccgta actggcatg 
aacccgttt aggaaaagt tgcacttgc attattcat 
aatttagga atccatttt ctagaatat gggagcagt 
taacattgt tttattaca tacagataa ggttttata 
atcgggatc gtctgcctg gaaaacaaa cgatatttt 
attcatgat ctgtattct aatgcgtcg gattaacga 
aacgttcat gtttttatt ttgtgttgt attaggagg 
gcgggtgct aaaaccatg gaggttttt catgatgtg 
gtttgaagc aaatttgga tcgggtggt agtaaagcg 
ttcagtagt ctatgcttc attataatt agtaaattt 
ggttaaaat ggtatagcc gactatgca atcgatagt 
cgctttatt ggtcgtatt gtgtgacct ttgaaagtc 
aggtttgta gttaaaaca gccttaaat gagcaaatg 
tcaatggga tagattagg tggcattat ttaatttcc 
cttgtaatg gtttttcct ttgtttaag cgagtggag 
tcgagtaaa attggattt aaaagttgt gtgtctttg 
aaaaagttt aatttgttg tatgatgtt agaaattta 
atttgtgtg ttacataaa tgatattgc ctgtccggg 
gtctggaat gaataaaat gtctcggga agaattttg 
cagggttgg gaaaaatgt gaggaaagg gggtggtag 
gtcagagat gatgtctac tgaccgatc gtccttgat 
tcccccatt ttggggtga atgacctcg cacattgaa 
tttccctgt gagcgtgtt gggggtgag ggctgaata 
tcgttttgc aggtgattt cgctgctat tgaacgaat 
tggaattgg agtaatagg aatcgagtc cggtgataa 
taattcggg gtatttgtt gtggatggc gctctaagt 
gggtaaaaa acagtagcg caactggcg caacgatag 
aattgcaag gagcaggcg cccgtctat tgattctta 
ggttgagta gagccgtcg tcgacccga ccacggatt 
gccaataag gtggggctc ctgtcatgc tgcacgagc 
tctcgtgtc cgtcgagtc tggtggctc attaagttc 
tcgcgacct acgccgtct cctctcacg ttttctggc 
ccccggagt ttccggtgc ggtgtatgg cttgtcggc 
ctcagagtt acttggaga gaatttaag tgcccattc 
gacctgatg attggctca ttctggaac ttgtgcaga 
gcttgcccg tcgatgcct gtcgataag ctgcactcc 
gagtaccgg agtacttac cgatggcac gagtacacg 
gggcccagg caggaggtc gtgcggagg ccaccgcag 
cccaacgcc gctccgaac gccggcgac actcagcac 
tcctccaag gaggatgag gtgcataat gagctgccc 
aagctggaa ccggcgatg cctaggagg aagaagtat 
cccgacttg gcctaccgc caccacgag tttctgatc 
agtgatggc gaaatcacc gcgaatggg gtgtgcaac 
acggaacct agggctcgg tcggaggag cgtggggcg 
cactggagg ccttcccgg cggagcaag tcggaggga 
ccgcgtggc ggcggcggc cacggggac ggcatgcgg 
gagcgggag cggcgtagg gaatcggac ccggatttg 
gagaacatg ggacgcgaa actgggctt ctccggaag 
gccatttca aaaattagc actgaatac agactgcaa 
ttcgcttgg cctcagggc catacttca cgtagagat 
gccgtcgat tcctcggca cctcgcaaa tcccaatcg 
atgggagcg ctaaaaccg gccaccaat gcaatggtg 
cacaaaaaa cgcatcgat ttggaaaat aaggatgcc 
agtgaactc gaaccatta gtcgatgaa agaaacaca 
cgtgaagac aagactcac atattcaag gatgaattc 
aattccgaa tacaagaag aacttcaga cctttctcc 
cagtatgaa tactcggaa ggacgcttc accaaacgg 
ggagctccc gtcgatgac accgataac tcggccgga 
caaaactcg ctaccgcct caatgcgag aagaacgac 
tcttggtac agggaagtc gtcgaattg cgaaaaaag 
gcaggagaa tataagcac cgcggttgg ggtagtgaa 
cttgctcca gataggctt tctgatata tacaataag 
caagttgaa ctttgggat caagtttca cggagaagt 
tctctatca gccttatct ctcgcttcc atgacacac 
aagtcttat acaaaagaa gagaaggaa gtagataat 
aacaacaag acttctcca tcgaaagcg gctcgcaat 
gctgaaaac tcagctcga attgtacga gatatgatc 
agacatcat ttagaacga acaactggt ggttcagaa 
tttgacggt ttgattctg tcgccgact agagagaaa 
ctcgaaccg actatacca cgcaaagat gatgattcg 
agaagttcg caaaagaac agccccaag aaacactcg 
ccgatgaaa tcatcatct ttgaagcga cataaccag 
aaagccccc aaaagcggt cctaagaac ctacgttcc 
cagtctgtt ggtcctgtg actgatacg actgaaaaa 
cggtcacca aagcgccag tcacggtct gccaccgtc 
aaagagcga aaatcttcg gcaaatcaa gctagcatc 
aaaagacct cgaccttca tccttgaac actactgtc 
tcatcccga tctaaacat agctcggta ccctctaaa 
accgaagac gacagattg gccaaagct aattcaaaa 
tctaacact aagcaaaaa ctaggcact aaacagtta 
gaaaaagga aattctgga gccgaccca cccaagacc 
gaagctaac gaagaagtg aagaacgcc ccagtcgaa 
gcacccgaa ataatcgat tacgagccg gtggtaaag 
tcgccgccg gaaccgact agggtgaaa tctcccgaa 
caaattctg atgcgttcc ccggatcct gtcaactgg 
actgtgcca ctcgacacc ggaaaaact tttactgtc 
acacaaaac gtcagggag ggggatatg agtagtcga 
ccccatagc gaagtgaaa gcctggact cccccagac 
gtgcccctt cccatcgcc cagtctgct cctccgact 
cttgatcaa aataaggaa caaggcatg tcgtatgga 
tttagcagt gaaagcatg aactcgggc cagggcaga 
gtcatcgct gcacagctg agagacctc caaccaacg 
gtagagcat ctaaggcca cgttccatc gcagatgca 
tctttcaac agggtagta gccagaaag tgtcggaat 
ggccacggt tttgtaact ccgtggtgt atgttcgca 
aggactgaa caagggaca tacaccacg gcttcgcgc 
catttgctg aaccttatt tgagccgtt tgcccagct 
ttacctttg taatcaact gcttatgtt ccatgccat 
ccgtttaca aatccgtca aggtgccac atttcgttc 
gaaattatg gacgtcccc tttatacaa aaatttgtg 
atctctaat cagtgcact cgtgttttc tgccacaag 
gaagtcaga cgaaactat ctatggttg acatatatt 
catatattt tgtgtagat gcgtttgct tgccaactc 
tctggttaa tttagtgac atcgaacgc acttatgtt 
atttattat taatcatac agtaaagag ttatataaa 
agttt
    • >TC005170 RB
      aaacgctcg agatttgac gaattttgt tgccacacg 
acggcgtca gcccgcatt gctgtggct taattaatt 
atgcaaggg agctttcgt gttcacttt ttattcaaa 
agccccaaa tgtcgagta tgacgtcgc tggaagaaa 
atttttggt tcgcattaa tcaaccggc gactgcact 
caacagatt cagaagtgc aacgctatg ttgcattat 
gttgtgcgg atgtgaaaa agcaatgca atttacggt 
tttctgtgt taaatccaa aaaaccgta actggcatg 
aacccgttt aggaaaagt tgcacttgc attattcat 
aatttagga atccatttt ctagaatat gggagcagt 
taacattgt tttattaca tacagataa ggttttata 
atcgggatc gtctgcctg gaaaacaaa cgatatttt 
attcatgat ctgtattct aatgcgtcg gattaacga 
aacgttcat gtttttatt ttgtgttgt attaggagg 
gcgggtgct aaaaccatg gaggttttt catgatgtg 
gtttgaagc aaatttgga tcgggtggt agtaaagcg 
ttcagtagt ctatgcttc attataatt agtaaattt 
ggttaaaat ggtatagcc gactatgca atcgatagt 
cgctttatt ggtcgtatt gtgtgacct ttgaaagtc 
aggtttgta gttaaaaca gccttaaat gagcaaatg 
tcaatggga tagattagg tggcattat ttaatttcc 
cttgtaatg gtttttcct ttgtttaag cgagtggag 
tcgagtaaa attggattt aaaagttgt gtgtctttg 
aaaaagttt aatttgttg tatgatgtt agaaattta 
atttgtgtg ttacataaa tgatattgc ctgtccggg 
gtctggaat gaataaaat gtctcggga agaattttg 
cagggttgg gaaaaatgt gaggaaagg gggtggtag 
gtcagagat gatgtctac tgaccgatc gtccttgat 
tcccccatt ttggggtga atgacctcg cacattgaa 
tttccctgt gagcgtgtt gggggtgag ggctgaata 
tcgttttgc aggtgattt cgctgctat tgaacgaat 
tggaattgg agtaatagg aatcgagtc cggtgataa 
taattcggg gtatttgtt gtggatggc gctctaagt 
gggtaaaaa acagtagcg caactggcg caacgatag 
aattgcaag gagcaggcg cccgtctat tgattctta 
ggttgagta gagccgtcg tcgacccga ccacggatt 
gccaataag gtggggctc ctgtcatgc tgcacgagc 
tctcgtgtc cgtcgagtc tggtggctc attaagttc 
tcgcgacct acgccgtct cctctcacg ttttctggc 
ccccggagt ttccggtgc ggtgtatgg cttgtcggc 
ctcagagtt acttggaga gaatttaag tgcccattc 
gacctgatg attggctca ttctggaac ttgtgcaga 
gcttgcccg tcgatgcct gtcgataag ctgcactcc 
gagtaccgg agtacttac cgatggcac gagtacacg 
gggcccagg caggaggtc gtgcggagg ccaccgcag 
cccaacgcc gctccgaac gccgtgccc aagctggaa 
ccggcgatg cctaggagg aagaagtat cccgacttg 
gcctaccgc caccacgag tttctgatc agtgatggc 
gaaatcacc gcgaatggg gtgtgcaac acggaacct 
agggctcgg tcggaggag cgtggggcg cactggagg 
ccttcccgg cggagcaag tcggaggga ccgcgtggc 
ggcggcggc cacggggac ggcatgcgg gagcgggag 
cggcgtagg gaatcggac ccggatttg gagaacatg 
ggacgcgaa actgggctt ctccggaag gccatttca 
aaaattagc actgaatac agactgcaa ttcgcttgg 
cctcagggc catacttca cgtagagat gccgtcgat 
tcctcggca cctcgcaaa tcccaatcg atgggagcg 
ctaaaaccg gccaccaat gcaatggtg cacaaaaaa 
cgcatcgat ttggaaaat aaggatgcc agtgaactc 
gaaccatta gtcgatgaa agaaacaca cgtgaagac 
aagactcac atattcaag gatgaattc aattccgaa 
tacaagaag aacttcaga cctttctcc cagtatgaa 
tactcggaa ggacgcttc accaaacgg ggagctccc 
gtcgatgac accgataac tcggccgga caaaactcg 
ctaccgcct caatgcgag aagaacgac tcttggtac 
agggaagtc gtcgaattg cgaaaaaag gcaggagaa 
tataagcac cgcggttgg ggtagtgaa cttgctcca 
gataggctt tctgatata tacaataag caagttgaa 
ctttgggat caagtttca cggagaagt tctctatca 
gccttatct ctcgcttcc atgacacac aagtcttat 
acaaaagaa gagaaggaa gtagataat aacaacaag 
acttctcca tcgaaagcg gctcgcaat gctgaaaac 
tcagctcga attgtacga gatatgatc agacatcat 
ttagaacga acaactggt ggttcagaa tttgacggt 
ttgattctg tcgccgact agagagaaa ctcgaaccg 
actatacca cgcaaagat gatgattcg agaagttcg 
caaaagaac agccccaag aaacactcg ccgatgaaa 
tcatcatct ttgaagcga cataaccag aaagccccc 
aaaagcggt cctaagaac ctacgttcc cagtctgtt 
ggtcctgtg actgatacg actgaaaaa cggtcacca 
aagcgccag tcacggtct gccaccgtc aaagagcga 
aaatcttcg gcaaatcaa gctagcatc aaaagacct 
cgaccttca tccttgaac actactgtc tcatcccga 
tctaaacat agctcggta ccctctaaa accgaagac 
gacagattg gccaaagct aattcaaaa tctaacact 
aagcaaaaa ctaggcact aaacagtta gaaaaagga 
aattctgga gccgaccca cccaagacc gaagctaac 
gaagaagtg aagaacgcc ccagtcgaa gcacccgaa 
ataatcgat tacgagccg gtggtaaag tcgccgccg 
gaaccgact agggtgaaa tctcccgaa caaattctg 
atgcgttcc ccggatcct gtcaactgg actgtgcca 
ctcgacacc ggaaaaact tttactgtc acacaaaac 
gtcagggag ggggatatg agtagtcga ccccatagc 
gaagtgaaa gcctggact cccccagac gtgcccctt 
cccatcgcc cagtctgct cctccgact cttgatcaa 
aataaggaa caaggcatg tcgtatgga tttagcagt 
gaaagcatg aactcgggc cagggcaga gtcatcgct 
gcacagctg agagacctc caaccaacg gtagagcat 
ctaaggcca cgttccatc gcagatgca tctttcaac 
agggtagta gccagaaag tgtcggaat ggccacggt 
tttgtaact ccgtggtgt atgttcgca aggactgaa 
caagggaca tacaccacg gcttcgcgc catttgctg 
aaccttatt tgagccgtt tgcccagct ttacctttg 
taatcaact gcttatgtt ccatgccat ccgtttaca 
aatccgtca aggtgccac atttcgttc gaaattatg 
gacgtcccc tttatacaa aaatttgtg atctctaat 
cagtgcact cgtgttttc tgccacaag gaagtcaga 
cgaaactat ctatggttg acatatatt catatattt 
tgtgtagat gcgtttgct tgccaactc tctggttaa 
tttagtgac atcgaacgc acttatgtt atttattat 
taatcatac agtaaagag ttatataaa agttt

    If you use iBeetle-Base, please cite: Dönitz J et al.: Expanded and updated data and a query pipeline for iBeetle-Base,
    Nucleic Acids Res. 2018 Jan 4;46(D1):D831-D835. doi: 10.1093/nar/gkx984.

    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY