General information | |||
TC034332
Former TC numbers If one gene is splitted or genes are merged, the original TC numbers are listed. One listed former TC number indicates the previous gene has be splitted, serveral former TC number represents a merged gene. |
Gene
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
NC_007424.3: 7245920..7313784 | |
Sequence information | |||
Transcripts / Proteins (2) | Get mRNA sequence
Get CDS sequence Get protein sequence |
||
Ortholog information (from OrthoDB)
The information about the homolog genes in Drosophila
is provided by OrthoDB http://www.orthodb.org/.
The homologs are sorted according to their similarity score. For an orthology statement additional
analysis are required. | |||
Closest fly homologs | TC034332 |
GO terms for Tribolium
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There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.
GO terms for the homologous Drosophila genes
Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.
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GO ID | * {{ blurIdResult }} |
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Evidence | {{ blurEvidenceResult }} |
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Reference | * {{ blurReferenceResult }} |
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Quotation | ||
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Publish name | ||
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* : mandatory fields
Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.
General information | ||||
iB_01977 | iB fragment
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
Get FastA Get primers |
Pupal injection procedure
Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.
3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.
9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.
11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.
Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.
13 dpi: Egg productivity and Ovary analysis
The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi).
In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.
14 dpi: Analysis of embryonic musculature and early embryonic development
Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.
15 dpi: Analysis of larval instar 1 cuticle
Offspring of injected females were analysed and cuticle phenotypes were annotated.
22 dpi: Stink gland analysis
Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.
Terms used in the pupal injection procedure
- larval pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- empty eggs
- Just empty shells are visible, no cuticle has been developed.
- strong defects
- L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
- strongly fragmented (cuticle crumbs)
- No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
- cuticle remnants (with unidentifiable segments)
- Segments or parts of appendages are recognizable, but identity is not clear.
- cuticle remnants (with some identifiable segments)
- At least one segment or appendage is clearly regonizable.
- number of eggs on slide
- affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
For the embryonic muscle analysis the hatched as well as the not hatched were analysed. - total number of affected eggs/embryos/larvae
- Summary of all different phenotypes/ phenotypic series which were annotated.
- inside-out
- The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
Lethality 11 days after pupal injection: 60.0% (includes death as pupa, adult)
eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 4 (3 dpi)adult lethality - Number of animals showing the phenotype: 1 (9 dpi)
egg chamber mostly not present - Number of animals showing the phenotype: 3
Larval injection procedure
Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.
11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.
16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.
19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.
22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.
41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).
Terms used in the larval injection procedure
- pupal/ adult pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- pupal molt not fulfilled
- The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
Lethalities 11 days after larval injection: 70.0% (includes death as larva, prepupa, pupa)
Lethalities 22 days after larval injection: 100.0% (includes death as larva, prepupa, pupa, adult)
pupal molt delayed (still larva) - Number of animals showing the phenotype: 3 (11 dpi)
larva lethality late (L7) - Number of animals showing the phenotype: 3 (16 dpi)
Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.
General information | ||||
iB_06453 | iB fragment
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
Get FastA Get primers |
Pupal injection procedure
Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.
3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.
9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.
11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.
Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.
13 dpi: Egg productivity and Ovary analysis
The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi).
In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.
14 dpi: Analysis of embryonic musculature and early embryonic development
Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.
15 dpi: Analysis of larval instar 1 cuticle
Offspring of injected females were analysed and cuticle phenotypes were annotated.
22 dpi: Stink gland analysis
Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.
Terms used in the pupal injection procedure
- larval pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- empty eggs
- Just empty shells are visible, no cuticle has been developed.
- strong defects
- L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
- strongly fragmented (cuticle crumbs)
- No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
- cuticle remnants (with unidentifiable segments)
- Segments or parts of appendages are recognizable, but identity is not clear.
- cuticle remnants (with some identifiable segments)
- At least one segment or appendage is clearly regonizable.
- number of eggs on slide
- affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
For the embryonic muscle analysis the hatched as well as the not hatched were analysed. - total number of affected eggs/embryos/larvae
- Summary of all different phenotypes/ phenotypic series which were annotated.
- inside-out
- The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
Lethality 11 days after pupal injection: 30.0% (includes death as pupa, adult)
adult lethality - Number of animals showing the phenotype: 3 (9 dpi)affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): 50% - 80%
remarks: muscle pattern potentially obscured by segmentation defect,
Larval injection procedure
Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.
11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.
16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.
19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.
22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.
41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).
Terms used in the larval injection procedure
- pupal/ adult pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- pupal molt not fulfilled
- The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
Lethalities 11 days after larval injection: 10.0% (includes death as larva, prepupa, pupa)
Lethalities 22 days after larval injection: 10.0% (includes death as larva, prepupa, pupa, adult)
- >TC034332 RA
MSKTSTRIP TFRPKTPQI KPKPAEISQ KDLGKRVRV VEKEGTLRY VGNVHFSTG VWCGVELDS TLGKHDGAV NGVRYFACS QRCGLMAPL CKVALLEGT ESAEDGDSG PYSMLFIDH KTERDSSEE SIDDLNRTV INVKEQIKR TFSKNDAVS NDLYVDNGQ KFDDTDQQS YENFFNELG VEVKRRKTA AKNDTIVLE KPSSLPQLR TNQTFDFGV LSALSKFSH STPVRGDFE ESLLRKLQL TSNLDDDGS KRDSLEFEE SLGILTPEQ MVDGTSFMS VINSRTPSS ECIREIKEK PSELPSPNL VDASVTDFS LGIIDEQLI NNITLKTDT TMNMELPLD PVGKAVTLS RPEQTPSPE ELPLDPTPI VESDSKTEP TKSKTSSFI TSITSITSL DTGYQGDGE MSRPASRGA DNSPLTRRP LPRPQTRRP DPMTDSDFY TESDADNHE ENPLRGDRR AQVIDGTLY GVDPQAAAD IYVNNRENM DSSGIFTDI ESNPRNEED VRTTDVSPS DTSTKTISG NSQNNLQEI LEKSATAEE EVAKENPKK RNAPSPVVS SPASVRSPR HKEENASKK FKLPKREVA SKVKAMLES SPQSTEKKT VKKPVGRWD AVMNKISKT EQKTNLKDV KSKVFNSVN VGPVQRQTE VRKPGLRQP SSVKSPNTK LRRVRARPG STASPKSNV ESSIHSSLS DLSASGTLP KTAGSSKKR EVVQVTQVL TASKLPRQA SQNETKKTT PTTSLSENK PKRTPTSLK EKKQPLIKE CGRATVKGG RTSPVVRPP VHTRAPTKP VPKVAEALA VLVQHLVFN VEAYQVPVL KKQVQKLRN EAEEIRLRC QRLEETLAE ERVEKSRLI EDERVKCAN EISELVEKH RNEILELNS KQYELESRL CEENEANKS VLVKQNEEK LVTLKLEFQ KLQKTHEES LDILREEND AIREQIDEK NAQIEEIKH ESRKLKDDY EAKEMKLKE QLQSVKSEN HKLKNELGK VEDKFEEKL NAVNEENAR LREENERLL SFSNIKDKE TSIQELQSL RVVLELRQN EVAELRRAL AEAKQKNDI LSAAEERSA SLSARCEDL ELQLQRKNE QELTLIAEN KKLYDSFKE EINQNKRLC QHNEELKWK LKQNKEIVS KVLEQAAEE SSFNRSLLS ASFNERHST KQNFDRTLS FRQTSAPWK PRADDLSPP SSPKVKGVV EKSDSVSYV LDLDESPEI VASRIVRRS FRNSTPPKT TPTKSPSNK RPRMKFPLS LSASASAIL PSNKAEFGR SLSVRNGDL GGWASSTPK PQDDDLDLD LDEDELKLP ALPSEIGRK NGAQALPSP KHLAGEAMI SESNSEDES TSSSSVQL
- >TC034332 RB
MGQHPSKDK LNRSSSERI HTRERFGSF GKKGSSKKR EVVQVTQVL TASKLPRQA SQNETKKTT PTTSLSENK PKRTPTSLK EKKQPLIKE CGRATVKGG RTSPVVRPP VHTRAPTKP VPKVAEALA VLVQHLVFN VEAYQVPVL KKQVQKLRN EAEEIRLRC QRLEETLAE ERVEKSRLI EDERVKCAN EISELVEKH RNEILELNS KQYELESRL CEENEANKS VLVKQNEEK LVTLKLEFQ KLQKTHEES LDILREEND AIREQIDEK NAQIEEIKH ESRKLKDDY EAKEMKLKE QLQSVKSEN HKLKNELGK VEDKFEEKL NAVNEENAR LREENERLL SFSNIKDKE TSIQELQSL RVVLELRQN EVAELRRAL AEAKQKNDI LSAAEERSA SLSARCEDL ELQLQRKNE QELTLIAEN KKLYDSFKE EINQNKRLC QHNEELKWK LKQNKEIVS KVLEQAAEE SSFNRSLLS ASFNERHST KQNFDRTLS FRQTSAPWK PRADDLSPP SSPKVKGVV EKSDSVSYV LDLDESPEI VASRIVRRS FRNSTPPKT TPTKSPSNK RPRMKFPLS LSASASAIL PSNKAEFGR SLSVRNGDL GGWASSTPK PQDDDLDLD LDEDELKLP ALPSEIGRK NGAQALPSP KHLAGEAMI SESNSEDES TSSSSVQL
- >TC034332 RA
atgtcgaag acgtcgacc cggattccg acgtttcgg cccaagaca ccgcaaatc aagccgaaa ccggcggaa atctcgcaa aaggacctg gggaagcgg gtccgcgtg gtcgagaag gagggaact ctgcggtac gtcggcaac gtgcacttc tccacgggt gtatggtgt ggtgtcgaa ctcgactcg accttgggc aagcacgat ggcgccgtt aacggggtt cgctacttc gcctgttcg cagcgctgc ggcttgatg gcgccgctg tgcaaagtc gcgctgttg gaaggaacc gaaagtgct gaagatggg gattctggg ccttacagc atgctcttc atcgaccac aaaaccgag cgagattcg tccgaggag tcgatcgat gatctgaac cgaaccgtc atcaacgtc aaagagcag atcaagcgc acttttagc aaaaacgac gcggtctcg aacgacctg tacgtagac aatggtcaa aagttcgac gatacggac cagcagtct tacgagaac ttcttcaac gagctgggg gtcgaggtc aagaggcgg aaaaccgcg gcgaagaac gacaccatc gtcttagag aaaccgtcg tcgctgccg caactgcgg acgaaccaa acgttcgat ttcggcgtc ctgtcggcg ttgagcaaa ttcagccac tcgaccccc gtccgtggc gacttcgag gagtctctg ctgcggaaa ctgcaactg acttcgaac ctggacgac gacgggagc aaacgcgac tcgctggag ttcgaggag tctttgggg atcctcacc ccggagcag atggtcgat gggacgagc ttcatgtct gtgataaac tcccgaacg cctagctcc gaatgcatt agagagatc aaggagaag ccgagcgag ctcccaagc cccaacctg gtggacgcg agcgtcacc gacttcagc ctcgggatc atcgacgag cagctgatc aacaacatt acgctcaaa accgacacc accatgaac atggagctg cctctggac cccgtcggc aaggcggtc acgctgtcg cgccccgag cagacgccc tcgcccgag gagctgcct ctggacccg accccaatc gtggaaagc gactccaag accgagccg accaagtcc aaaacttcc agctttatt acgagtatt acgagcatt actagtctg gatacgggg taccagggc gatggggag atgtcccgg ccggcgagt cggggggct gataactcg ccactgacg cggcgcccc ctgccgagg ccacaaacg cgccggccg gaccccatg acagactcc gatttttac accgaaagc gatgctgat aaccacgag gagaacccc ctgcggggc gaccgacgg gcgcaggtc atcgacggc accctctac ggggttgac ccgcaagcg gcggccgac atttacgtc aacaaccgg gagaatatg gactcgagt ggcattttc accgacatt gagtcaaac cccaggaac gaggaggac gtcaggacg actgatgtc tccccgtcc gacacctcc acgaagacc atttcgggg aacagccaa aacaacctc caggagatt ttggaaaaa tccgcaact gctgaagaa gaggtcgcc aaggagaat ccgaagaag agaaatgcc ccgagtccg gtcgtgtcg agtcctgcg agtgtgcgg tcgccgagg cacaaagag gaaaatgcc tcgaaaaaa ttcaaattg cccaaacgc gaggtcgcc tccaaagtc aaggcgatg cttgagtcg agtcctcaa agcacggag aagaaaact gtgaaaaaa ccagtcggg cgctgggac gctgtgatg aataaaatc tcaaagact gaacaaaaa actaattta aaagacgtc aagtccaaa gtgtttaac agtgtgaat gtgggtccc gtgcagaga cagacagaa gtgaggaaa ccggggctg aggcagccg tcgagtgtg aagtcgccc aacaccaaa ttgcgccgg gtgagggcc cggcccgga agtaccgcg tctccgaag agcaacgtg gagagcagc atccacagc tctttgagc gacttgagt gcgtctggg acattgccg aagactgct gggtcgtcc aagaaacgc gaagtggtt caagttact caagtttta accgcttcg aagctacca aggcaagca tcgcaaaac gagactaag aagacaaca ccaacaact tccctgagt gaaaacaaa ccaaaacga accccgaca agccttaaa gagaagaag cagccatta attaaagag tgtggaaga gctactgtg aaggggggc cgcacgtcg cccgtagtc cggcccccc gttcacacg cgggccccc acgaagcct gtccccaaa gtggccgaa gcccttgca gtcctcgtc caacatctc gtgttcaat gtggaagcg tatcaagtc cctgtcctg aagaagcaa gtccaaaag ctgcgaaac gaagccgaa gaaatcagg ttgaggtgt cagcgcttg gaggaaact ctagccgaa gaaagggtc gagaaaagt cgactgatc gaagacgag cgtgtgaag tgtgcgaat gaaatcagc gaattagtc gagaagcat agaaatgag atattagaa ctgaatagc aaacaatac gagttagag tcgcgcctt tgcgaggaa aacgaggca aataagtcg gttttagtc aagcagaat gaggaaaaa ctcgtgact ttgaagttg gagtttcag aagttgcag aaaacgcat gaagagtcc ctggatatc ttacgggaa gaaaacgat gcgattcgt gaacagatc gacgagaag aatgcgcaa attgaagaa atcaaacac gagagtcgc aaactcaaa gacgattac gaagccaaa gagatgaag ctcaaggaa cagctgcag agtgttaag agtgagaat cataagttg aagaatgag ttgggcaag gttgaagat aagttcgag gagaagttg aatgcggtt aatgaggaa aacgcgagg ctgagggag gaaaacgaa aggctgctt agcttcagt aatatcaag gataaggaa actagtatt caggaactt cagtcactc cgagtggtc ctagaattg agacaaaac gaagtcgcc gagctgcgc cgcgctttg gcggaagcc aaacaaaaa aatgacata ttatccgca gctgaagaa cgatcagct tcgctcagt gccagatgc gaggatttg gagctccaa ttgcagcga aagaacgaa caagaactg accttaatt gccgaaaat aagaagtta tacgatagt tttaaggaa gaaatcaat caaaacaaa agactgtgt caacacaac gaagaactc aaatggaag ctgaagcag aacaaggag atcgtgagc aaagtcctg gagcaagcc gccgaagag tccagcttc aaccgctcc ctgctgagc gcaagcttc aacgagcgc cactccacc aagcaaaac ttcgaccgc actctctcc tttcgccaa acgagcgcg ccgtggaag ccgcgagcc gacgacctg tccccgccc tcctccccg aaggtgaag ggcgtggtc gagaagtcc gattcggtg agctacgtc cttgacctg gacgagagc cccgagatc gtggcgtcg cgcatcgtg aggcggagc ttccgcaac tcgactccg cccaagacc acgcccacc aagtcgccg tccaacaag cggccccgg atgaagttc cccctgagt ctgagcgcg tcggcgagc gcgattttg ccctcgaac aaggcggag ttcgggcgg tcgctgtcg gtccggaac ggggacctg gggggctgg gccagcagc acccccaag ccccaggac gacgacctg gacctggac ctggacgag gacgagctg aagctgccg gcgctgccg agcgagatc gggaggaag aacggggcc caggcgctg ccgagcccc aagcacctg gccggggag gccatgatt tcggagagc aattccgag gatgagagc acgagttct tccagtgtg caattgtga
- >TC034332 RB
atggggcaa catccttcg aaggataaa ctaaatcgt tcatcatcc gaaaggata cacactagg gagcggttc ggtagtttt ggcaagaaa gggtcgtcc aagaaacgc gaagtggtt caagttact caagtttta accgcttcg aagctacca aggcaagca tcgcaaaac gagactaag aagacaaca ccaacaact tccctgagt gaaaacaaa ccaaaacga accccgaca agccttaaa gagaagaag cagccatta attaaagag tgtggaaga gctactgtg aaggggggc cgcacgtcg cccgtagtc cggcccccc gttcacacg cgggccccc acgaagcct gtccccaaa gtggccgaa gcccttgca gtcctcgtc caacatctc gtgttcaat gtggaagcg tatcaagtc cctgtcctg aagaagcaa gtccaaaag ctgcgaaac gaagccgaa gaaatcagg ttgaggtgt cagcgcttg gaggaaact ctagccgaa gaaagggtc gagaaaagt cgactgatc gaagacgag cgtgtgaag tgtgcgaat gaaatcagc gaattagtc gagaagcat agaaatgag atattagaa ctgaatagc aaacaatac gagttagag tcgcgcctt tgcgaggaa aacgaggca aataagtcg gttttagtc aagcagaat gaggaaaaa ctcgtgact ttgaagttg gagtttcag aagttgcag aaaacgcat gaagagtcc ctggatatc ttacgggaa gaaaacgat gcgattcgt gaacagatc gacgagaag aatgcgcaa attgaagaa atcaaacac gagagtcgc aaactcaaa gacgattac gaagccaaa gagatgaag ctcaaggaa cagctgcag agtgttaag agtgagaat cataagttg aagaatgag ttgggcaag gttgaagat aagttcgag gagaagttg aatgcggtt aatgaggaa aacgcgagg ctgagggag gaaaacgaa aggctgctt agcttcagt aatatcaag gataaggaa actagtatt caggaactt cagtcactc cgagtggtc ctagaattg agacaaaac gaagtcgcc gagctgcgc cgcgctttg gcggaagcc aaacaaaaa aatgacata ttatccgca gctgaagaa cgatcagct tcgctcagt gccagatgc gaggatttg gagctccaa ttgcagcga aagaacgaa caagaactg accttaatt gccgaaaat aagaagtta tacgatagt tttaaggaa gaaatcaat caaaacaaa agactgtgt caacacaac gaagaactc aaatggaag ctgaagcag aacaaggag atcgtgagc aaagtcctg gagcaagcc gccgaagag tccagcttc aaccgctcc ctgctgagc gcaagcttc aacgagcgc cactccacc aagcaaaac ttcgaccgc actctctcc tttcgccaa acgagcgcg ccgtggaag ccgcgagcc gacgacctg tccccgccc tcctccccg aaggtgaag ggcgtggtc gagaagtcc gattcggtg agctacgtc cttgacctg gacgagagc cccgagatc gtggcgtcg cgcatcgtg aggcggagc ttccgcaac tcgactccg cccaagacc acgcccacc aagtcgccg tccaacaag cggccccgg atgaagttc cccctgagt ctgagcgcg tcggcgagc gcgattttg ccctcgaac aaggcggag ttcgggcgg tcgctgtcg gtccggaac ggggacctg gggggctgg gccagcagc acccccaag ccccaggac gacgacctg gacctggac ctggacgag gacgagctg aagctgccg gcgctgccg agcgagatc gggaggaag aacggggcc caggcgctg ccgagcccc aagcacctg gccggggag gccatgatt tcggagagc aattccgag gatgagagc acgagttct tccagtgtg caattgtga
- >TC034332 RA
taaggtcga aaatacacc aactcgaag cgcaaactc gtcctaaat cgtccacct cgttcgccg attaagaat tttcggttt tgtattgat ccgccaaaa gataagttt aatgaaact gaccgtgag tgataatgt ttagacaca tacacgaaa tagtgaggg ctgaaatag tgtgagtga agcaccgac atgtcgaag acgtcgacc cggattccg acgtttcgg cccaagaca ccgcaaatc aagccgaaa ccggcggaa atctcgcaa aaggacctg gggaagcgg gtccgcgtg gtcgagaag gagggaact ctgcggtac gtcggcaac gtgcacttc tccacgggt gtatggtgt ggtgtcgaa ctcgactcg accttgggc aagcacgat ggcgccgtt aacggggtt cgctacttc gcctgttcg cagcgctgc ggcttgatg gcgccgctg tgcaaagtc gcgctgttg gaaggaacc gaaagtgct gaagatggg gattctggg ccttacagc atgctcttc atcgaccac aaaaccgag cgagattcg tccgaggag tcgatcgat gatctgaac cgaaccgtc atcaacgtc aaagagcag atcaagcgc acttttagc aaaaacgac gcggtctcg aacgacctg tacgtagac aatggtcaa aagttcgac gatacggac cagcagtct tacgagaac ttcttcaac gagctgggg gtcgaggtc aagaggcgg aaaaccgcg gcgaagaac gacaccatc gtcttagag aaaccgtcg tcgctgccg caactgcgg acgaaccaa acgttcgat ttcggcgtc ctgtcggcg ttgagcaaa ttcagccac tcgaccccc gtccgtggc gacttcgag gagtctctg ctgcggaaa ctgcaactg acttcgaac ctggacgac gacgggagc aaacgcgac tcgctggag ttcgaggag tctttgggg atcctcacc ccggagcag atggtcgat gggacgagc ttcatgtct gtgataaac tcccgaacg cctagctcc gaatgcatt agagagatc aaggagaag ccgagcgag ctcccaagc cccaacctg gtggacgcg agcgtcacc gacttcagc ctcgggatc atcgacgag cagctgatc aacaacatt acgctcaaa accgacacc accatgaac atggagctg cctctggac cccgtcggc aaggcggtc acgctgtcg cgccccgag cagacgccc tcgcccgag gagctgcct ctggacccg accccaatc gtggaaagc gactccaag accgagccg accaagtcc aaaacttcc agctttatt acgagtatt acgagcatt actagtctg gatacgggg taccagggc gatggggag atgtcccgg ccggcgagt cggggggct gataactcg ccactgacg cggcgcccc ctgccgagg ccacaaacg cgccggccg gaccccatg acagactcc gatttttac accgaaagc gatgctgat aaccacgag gagaacccc ctgcggggc gaccgacgg gcgcaggtc atcgacggc accctctac ggggttgac ccgcaagcg gcggccgac atttacgtc aacaaccgg gagaatatg gactcgagt ggcattttc accgacatt gagtcaaac cccaggaac gaggaggac gtcaggacg actgatgtc tccccgtcc gacacctcc acgaagacc atttcgggg aacagccaa aacaacctc caggagatt ttggaaaaa tccgcaact gctgaagaa gaggtcgcc aaggagaat ccgaagaag agaaatgcc ccgagtccg gtcgtgtcg agtcctgcg agtgtgcgg tcgccgagg cacaaagag gaaaatgcc tcgaaaaaa ttcaaattg cccaaacgc gaggtcgcc tccaaagtc aaggcgatg cttgagtcg agtcctcaa agcacggag aagaaaact gtgaaaaaa ccagtcggg cgctgggac gctgtgatg aataaaatc tcaaagact gaacaaaaa actaattta aaagacgtc aagtccaaa gtgtttaac agtgtgaat gtgggtccc gtgcagaga cagacagaa gtgaggaaa ccggggctg aggcagccg tcgagtgtg aagtcgccc aacaccaaa ttgcgccgg gtgagggcc cggcccgga agtaccgcg tctccgaag agcaacgtg gagagcagc atccacagc tctttgagc gacttgagt gcgtctggg acattgccg aagactgct gggtcgtcc aagaaacgc gaagtggtt caagttact caagtttta accgcttcg aagctacca aggcaagca tcgcaaaac gagactaag aagacaaca ccaacaact tccctgagt gaaaacaaa ccaaaacga accccgaca agccttaaa gagaagaag cagccatta attaaagag tgtggaaga gctactgtg aaggggggc cgcacgtcg cccgtagtc cggcccccc gttcacacg cgggccccc acgaagcct gtccccaaa gtggccgaa gcccttgca gtcctcgtc caacatctc gtgttcaat gtggaagcg tatcaagtc cctgtcctg aagaagcaa gtccaaaag ctgcgaaac gaagccgaa gaaatcagg ttgaggtgt cagcgcttg gaggaaact ctagccgaa gaaagggtc gagaaaagt cgactgatc gaagacgag cgtgtgaag tgtgcgaat gaaatcagc gaattagtc gagaagcat agaaatgag atattagaa ctgaatagc aaacaatac gagttagag tcgcgcctt tgcgaggaa aacgaggca aataagtcg gttttagtc aagcagaat gaggaaaaa ctcgtgact ttgaagttg gagtttcag aagttgcag aaaacgcat gaagagtcc ctggatatc ttacgggaa gaaaacgat gcgattcgt gaacagatc gacgagaag aatgcgcaa attgaagaa atcaaacac gagagtcgc aaactcaaa gacgattac gaagccaaa gagatgaag ctcaaggaa cagctgcag agtgttaag agtgagaat cataagttg aagaatgag ttgggcaag gttgaagat aagttcgag gagaagttg aatgcggtt aatgaggaa aacgcgagg ctgagggag gaaaacgaa aggctgctt agcttcagt aatatcaag gataaggaa actagtatt caggaactt cagtcactc cgagtggtc ctagaattg agacaaaac gaagtcgcc gagctgcgc cgcgctttg gcggaagcc aaacaaaaa aatgacata ttatccgca gctgaagaa cgatcagct tcgctcagt gccagatgc gaggatttg gagctccaa ttgcagcga aagaacgaa caagaactg accttaatt gccgaaaat aagaagtta tacgatagt tttaaggaa gaaatcaat caaaacaaa agactgtgt caacacaac gaagaactc aaatggaag ctgaagcag aacaaggag atcgtgagc aaagtcctg gagcaagcc gccgaagag tccagcttc aaccgctcc ctgctgagc gcaagcttc aacgagcgc cactccacc aagcaaaac ttcgaccgc actctctcc tttcgccaa acgagcgcg ccgtggaag ccgcgagcc gacgacctg tccccgccc tcctccccg aaggtgaag ggcgtggtc gagaagtcc gattcggtg agctacgtc cttgacctg gacgagagc cccgagatc gtggcgtcg cgcatcgtg aggcggagc ttccgcaac tcgactccg cccaagacc acgcccacc aagtcgccg tccaacaag cggccccgg atgaagttc cccctgagt ctgagcgcg tcggcgagc gcgattttg ccctcgaac aaggcggag ttcgggcgg tcgctgtcg gtccggaac ggggacctg gggggctgg gccagcagc acccccaag ccccaggac gacgacctg gacctggac ctggacgag gacgagctg aagctgccg gcgctgccg agcgagatc gggaggaag aacggggcc caggcgctg ccgagcccc aagcacctg gccggggag gccatgatt tcggagagc aattccgag gatgagagc acgagttct tccagtgtg caattgtga gacgaactc tcgttttag ttgcttaca aactgccct aatcgtgtg taatcattg taatgtatt ttattatgt aactttttt gtaatactt tttgtaagt tttttaaaa ctactatat tataattct ttatcgaaa aactctttt ctttcttga ataggttgt gatcttttt gtacatgat tagtagata ttacttata cacagtatt aatgttggg tcgagaagc ctttttagt acaatactg cttatactt aactatgat tggattgta taatgtgta tatttttat gtatatgat gccctttat tgtttttgt tcgttgttg ccctttcaa gtgtctatt aataattta tttagtgag tataggtga ggaatggtg atgtatgta ttttcaatt gttaggacc aacatagat ttccacttt tcatattta ttgtataaa gttgcaaat gttcgttta tgatcaagt taataatat tgtacaata aatttattg aactaaa
- >TC034332 RB
ttttacagt taaatgatt tttcatggt caccttcac tcttctgaa agaagacat ctattcgag gatgatttg taagactgg actttttat agaaaatta taaattatc gctgtcagc atcatgaca cacttaccc atctgtgat atttttaaa taaaattat ggttcgaat taaattttg aataaaaaa atggggcaa catccttcg aaggataaa ctaaatcgt tcatcatcc gaaaggata cacactagg gagcggttc ggtagtttt ggcaagaaa gggtcgtcc aagaaacgc gaagtggtt caagttact caagtttta accgcttcg aagctacca aggcaagca tcgcaaaac gagactaag aagacaaca ccaacaact tccctgagt gaaaacaaa ccaaaacga accccgaca agccttaaa gagaagaag cagccatta attaaagag tgtggaaga gctactgtg aaggggggc cgcacgtcg cccgtagtc cggcccccc gttcacacg cgggccccc acgaagcct gtccccaaa gtggccgaa gcccttgca gtcctcgtc caacatctc gtgttcaat gtggaagcg tatcaagtc cctgtcctg aagaagcaa gtccaaaag ctgcgaaac gaagccgaa gaaatcagg ttgaggtgt cagcgcttg gaggaaact ctagccgaa gaaagggtc gagaaaagt cgactgatc gaagacgag cgtgtgaag tgtgcgaat gaaatcagc gaattagtc gagaagcat agaaatgag atattagaa ctgaatagc aaacaatac gagttagag tcgcgcctt tgcgaggaa aacgaggca aataagtcg gttttagtc aagcagaat gaggaaaaa ctcgtgact ttgaagttg gagtttcag aagttgcag aaaacgcat gaagagtcc ctggatatc ttacgggaa gaaaacgat gcgattcgt gaacagatc gacgagaag aatgcgcaa attgaagaa atcaaacac gagagtcgc aaactcaaa gacgattac gaagccaaa gagatgaag ctcaaggaa cagctgcag agtgttaag agtgagaat cataagttg aagaatgag ttgggcaag gttgaagat aagttcgag gagaagttg aatgcggtt aatgaggaa aacgcgagg ctgagggag gaaaacgaa aggctgctt agcttcagt aatatcaag gataaggaa actagtatt caggaactt cagtcactc cgagtggtc ctagaattg agacaaaac gaagtcgcc gagctgcgc cgcgctttg gcggaagcc aaacaaaaa aatgacata ttatccgca gctgaagaa cgatcagct tcgctcagt gccagatgc gaggatttg gagctccaa ttgcagcga aagaacgaa caagaactg accttaatt gccgaaaat aagaagtta tacgatagt tttaaggaa gaaatcaat caaaacaaa agactgtgt caacacaac gaagaactc aaatggaag ctgaagcag aacaaggag atcgtgagc aaagtcctg gagcaagcc gccgaagag tccagcttc aaccgctcc ctgctgagc gcaagcttc aacgagcgc cactccacc aagcaaaac ttcgaccgc actctctcc tttcgccaa acgagcgcg ccgtggaag ccgcgagcc gacgacctg tccccgccc tcctccccg aaggtgaag ggcgtggtc gagaagtcc gattcggtg agctacgtc cttgacctg gacgagagc cccgagatc gtggcgtcg cgcatcgtg aggcggagc ttccgcaac tcgactccg cccaagacc acgcccacc aagtcgccg tccaacaag cggccccgg atgaagttc cccctgagt ctgagcgcg tcggcgagc gcgattttg ccctcgaac aaggcggag ttcgggcgg tcgctgtcg gtccggaac ggggacctg gggggctgg gccagcagc acccccaag ccccaggac gacgacctg gacctggac ctggacgag gacgagctg aagctgccg gcgctgccg agcgagatc gggaggaag aacggggcc caggcgctg ccgagcccc aagcacctg gccggggag gccatgatt tcggagagc aattccgag gatgagagc acgagttct tccagtgtg caattgtga gacgaactc tcgttttag ttgcttaca aactgccct aatcgtgtg taatcattg taatgtatt ttattatgt aactttttt gtaatactt tttgtaagt tttttaaaa ctactatat tataattct ttatcgaaa aactctttt ctttcttga ataggttgt gatcttttt gtacatgat tagtagata ttacttata cacagtatt aatgttggg tcgagaagc ctttttagt acaatactg cttatactt aactatgat tggattgta taatgtgta tatttttat gtatatgat gccctttat tgtttttgt tcgttgttg ccctttcaa gtgtctatt aataattta tttagtgag tataggtga ggaatggtg atgtatgta ttttcaatt gttaggacc aacatagat ttccacttt tcatattta ttgtataaa gttgcaaat gttcgttta tgatcaagt taataatat tgtacaata aatttattg aactaaa
If you use iBeetle-Base, please cite: Dönitz J et al.: Expanded and updated data and a query pipeline for iBeetle-Base,
Nucleic Acids Res. 2018 Jan 4;46(D1):D831-D835. doi: 10.1093/nar/gkx984.
