Status
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Gene information
General information
TC030900
Former TC numbers

If one gene is splitted or genes are merged, the original TC numbers are listed. One listed former TC number indicates the previous gene has be splitted, serveral former TC number represents a merged gene.

TC015528,TC015529
Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007421.3: 1903396..1977626
Sequence information
Transcripts / Proteins (3) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC030900
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
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    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
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    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_05834

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 40.0% (includes death as pupa, adult)

    pupa eclosion not fulfilled (died as pupa) - Number of animals showing the phenotype: 1 (3 dpi)
    Days post injection


    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 2 (3 dpi)
    Days post injection


    adult lethality - Number of animals showing the phenotype: 1 (9 dpi)
    Days post injection


    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 50
    egg without cuticle embryo/egg without visible larval cuticle in cuticle preparation - Penetrance (percentage of animals/eggs on slide): less than 30%
    labrum not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%

    antenna not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    mandible not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    labium not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    head capsule size decreased - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    head everted (inside-out) - Penetrance (percentage of animals/eggs on slide): less than 30%

    thorax everted (inside-out) - Penetrance (percentage of animals/eggs on slide): less than 30%
    abdomen everted (inside-out) - Penetrance (percentage of animals/eggs on slide): less than 30%
    affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): 50% - 80%
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: -1.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: -1.0% (includes death as larva, prepupa, pupa, adult)

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC030900 RA
      MAEVNNRPV FKMNNDFWN QARGPPQSM AQNLSNSNQ 
      NSPVPGSTN SIPAHSPSQ QSNSSQNHV IQQQPQNQQ 
      QPQQQQQQQ NSVQQQNNG QQQQQQQQQ PNQQQQQQQ 
      QQQQLGSPN SQVAQAHAH ALAQVQAQQ QLVHMSQQH 
      QLNAGQNSP DKMAEKLVN DLQIFMHKS AMQMHAREL 
      TGRSEVKPH QCQQCLKSF SSNHQLVQH IRVHTGEKP 
      YKCSYCDRR FKQLSHVQQ HTRLHTGER PYKCHLPDC 
      GRAFIQLSN LQQHLRNHD AQVERAKNR PFHCTICGK 
      GFATESSLR THTSKVSHC IGRLQQHAA LIGGPNATS 
      CPLCHKMFL GGEALMEHM KHTHKDPNA SGVATKRRT 
      ANHPCPVCG KHYVNEGSL RKHLACHPE TSQLSSSLR 
      MWPCSVCQA VFTHESGLL THMEHMRMD TKHQFAAQY 
      VLSRAAAER RERETLLAA VSASASGSG LLGLTGMAG 
      AASGSPMCA SPSAHSDSS SGNGRLSSA GSEAGGLNN 
      NNNNCTTKL NEILRSNNG LHQQYNVEE QFHNANRMA 
      VIANMVGQG GVPPGLGSD SSAAANIAA ANIANLAMR 
      LGVTQANQV NNSSNPSTP PINNDTLSA SMNAMNAMR 
      ASMDSIRNM DAMRSSVMD MSSPQQSQQ QQDALRMQQ 
      HAEALLRSQ AEAALRLAM SQALPQLNQ HQQDNGSPL 
      RHNGNYQPH QGQSSQQLS PDLTEALRL QEQRLEQAL 
      RLHGSDPRT LGFSLSSQQ QNQQP
    • >TC030900 RB
      MAEVNNRPV FKMNNDFWN QARGPPQSM AQNLSNSNQ 
      NSPVPGSTN SIPAHSPSQ QSNSSQNHV IQQQPQNQQ 
      QPQQQQQQQ NSVQQQNNG QQQQQQQQQ PNQQQQQQQ 
      QQQQLGSPN SQVAQAHAH ALAQVQAQQ QLVHMSQQH 
      QLNAGQNSP DKMAEKLVN DLQIFMHKS AMQMHAREL 
      TGRSEVKPH QCQQCLKSF SSNHQLVQH IRVHTGEKP 
      YKCSYCDRR FKQLSHVQQ HTRLHTGER PYKCHLPDC 
      GRAFIQLSN LQQHLRNHD AQVERAKNR PFHCTICGK 
      GFATESSLR THTSKVSHQ HAALIGGPN ATSCPLCHK 
      MFLGGEALM EHMKHTHKD PNASGVATK RRTANHPCP 
      VCGKHYVNE GSLRKHLAC HPETSQLSS SLRMWPCSV 
      CQAVFTHES GLLTHMEHM RMDTKHQFA AQYVLSRAA 
      AERRERETL LAAVSASAS GSGLLGLTG MAGAASGSP 
      MCASPSAHS DSSSGNGRL SSAGSEAGG LNNNNNNCT 
      TKLNEILRS NNGLHQQYN VEEQFHNAN RMAVIANMV 
      GQGGVPPGL GSDSSAAAN IAAANIANL AMRLGVTQA 
      NQVNNSSNP STPPINNDT LSASMNAMN AMRASMDSI 
      RNMDAMRSS VMDMSSPQQ SQQQQDALR MQQHAEALL 
      RSQAEAALR LAMSQALPQ LNQHQQDNG SPLRHNGNY 
      QPHQGQSSQ QLSPDLTEA LRLQEQRLE QALRLHGSD 
      PRTLGFSLS SQQQNQQP
    • >TC030900 RC
      MAEVNNRPV FKMNNDFWN QARGPPQSM AQNLSNSNQ 
      NSPVPGSTN SIPAHSPSQ QSNSSQNHV IQQQPQNQQ 
      QPQQQQQQQ NSVQQQNNG QQQQQQQQQ PNQQQQQQQ 
      QQQQLGSPN SQVAQAHAH ALAQVQAQQ QLVHMSQQH 
      QLNAGQNSP DKMAEKLVN DLQLLSQLT LPDFNQLQR 
      NSTSSAISE RTLEECWTT LQRIFMHKS AMQMHAREL 
      TGRSEVKPH QCQQCLKSF SSNHQLVQH IRVHTGEKP 
      YKCSYCDRR FKQLSHVQQ HTRLHTGER PYKCHLPDC 
      GRAFIQLSN LQQHLRNHD AQVERAKNR PFHCTICGK 
      GFATESSLR THTSKVSHC IGRLQQHAA LIGGPNATS 
      CPLCHKMFL GGEALMEHM KHTHKDPNA SGVATKRRT 
      ANHPCPVCG KHYVNEGSL RKHLACHPE TSQLSSSLR 
      MWPCSVCQA VFTHESGLL THMEHMRMD TKHQFAAQY 
      VLSRAAAER RERETLLAA VSASASGSG LLGLTGMAG 
      AASGSPMCA SPSAHSDSS SGNGRLSSA GSEAGGLNN 
      NNNNCTTKL NEILRSNNG LHQQYNVEE QFHNANRMA 
      VIANMVGQG GVPPGLGSD SSAAANIAA ANIANLAMR 
      LGVTQANQV NNSSNPSTP PINNDTLSA SMNAMNAMR 
      ASMDSIRNM DAMRSSVMD MSSPQQSQQ QQDALRMQQ 
      HAEALLRSQ AEAALRLAM SQALPQLNQ HQQDNGSPL 
      RHNGNYQPH QGQSSQQLS PDLTEALRL QEQRLEQAL 
      RLHGSDPRT LGFSLSSQQ QNQQP
    CDS sequence
    • >TC030900 RA
      atggccgag gtcaacaac aggcccgtc ttcaagatg 
      aacaacgac ttctggaac caggcccgc ggcccgccc 
      cagagcatg gcccagaac ttgtccaac tcgaaccag 
      aactcgccg gtgccgggc tccaccaac tccatcccg 
      gcccactcg ccatcgcag cagagcaac agcagccaa 
      aaccacgtc atacaacaa caaccacaa aaccaacaa 
      caaccccaa caacaacaa caacaacaa aactcggta 
      cagcaacaa aacaacggc caacaacaa cagcagcaa 
      caacagcaa ccgaatcaa caacagcaa cagcaacag 
      caacagcag caactgggc agtcccaac tcgcaggtg 
      gcgcaggcc catgcccat gccctggcc caggtccag 
      gcccaacag cagttggtg cacatgtca caacagcac 
      caactcaac gctgggcaa aattcgccg gacaaaatg 
      gccgaaaag ttggtcaat gatttgcag attttcatg 
      cacaaatct gcgatgcaa atgcatgcc agggagctg 
      acgggacgc tcagaagtc aaaccacac cagtgccag 
      caatgtcta aagtctttc agcagcaat caccagtta 
      gtccaacat atcagggtg cacacgggg gaaaaaccc 
      tacaaatgt tcctattgt gacaggagg ttcaagcag 
      ttgagtcac gtgcaacag cacacgagg ctacatacg 
      ggtgagagg ccctacaag tgccacttg cctgactgc 
      ggaagggcc tttatccaa ctgtccaac cttcagcag 
      catctcaga aaccacgac gctcaggtc gaaagggcc 
      aaaaacagg cccttccac tgcaccatc tgtggaaaa 
      gggttcgcc accgagtcc agtctaagg acccatacg 
      tcgaaagta agccattgt attggtcgt ttgcagcaa 
      catgcagct ctgattggt ggacccaac gccacttct 
      tgtccgctt tgccataag atgttctta ggaggagag 
      gcgctcatg gagcacatg aagcacaca cacaaggac 
      cccaatgcc tcgggggtt gccacgaag agaaggaca 
      gcgaatcat ccttgtccc gtttgtgga aagcattat 
      gtgaatgaa ggatccctc aggaaacat ttggcgtgc 
      catcccgaa acgtcacaa ttgtcaagt tcgttgaga 
      atgtggccg tgttctgtt tgtcaagca gtttttacg 
      cacgaatca ggtcttctc acgcacatg gagcacatg 
      aggatggac accaagcac cagttcgcc gcccaatat 
      gtgctgtca cgcgccgcc gccgaaagg agagaacga 
      gagactttg ctggcggcc gtttccgct tccgcctcc 
      gggagcggc cttctaggc ctcacagga atggccggg 
      gcagcgagc ggtagccca atgtgtgca tcccccagc 
      gctcacagt gacagttcc tcaggcaat ggccgcctt 
      tcctctgcc ggttcagaa gccggcggt cttaacaac 
      aacaacaac aattgtaca acaaaactg aacgagatt 
      ttacggagc aacaacggt ctccaccaa cagtacaac 
      gtcgaagaa cagtttcat aatgctaac agaatggcc 
      gtcattgcc aacatggtg ggccaaggg ggggttccc 
      ccaggactc ggctccgac tcgtcggcc gctgccaac 
      atcgccgcc gccaatatt gccaacctt gccatgcgc 
      ctcggcgtc acacaggcc aatcaggtg aataacagc 
      agcaacccc tcaacgccc cccatcaac aatgacact 
      ctttccgcg tccatgaac gcgatgaac gccatgcgg 
      gcgtccatg gacagcata agaaacatg gacgcgatg 
      cggtcgtcg gtcatggac atgtcgtcg cctcagcag 
      tcccagcag cagcaggac gcgctcagg atgcagcag 
      cacgccgag gcgctgctg cggtcgcag gccgaggcg 
      gcgctcaga ctggccatg agccaggcg ctgccccag 
      ctgaaccag caccagcag gacaacggc agccccctg 
      cggcacaac ggcaactat cagccgcac caagggcag 
      tcgtcgcag cagctgagt ccggacctg accgaggcc 
      ctgcggctg caggagcag cggctggag caggccctg 
      cggctgcac gggagcgac ccccggact ctgggcttc 
      tccctcagc agccagcag cagaaccaa cagccatga
    • >TC030900 RB
      atggccgag gtcaacaac aggcccgtc ttcaagatg 
      aacaacgac ttctggaac caggcccgc ggcccgccc 
      cagagcatg gcccagaac ttgtccaac tcgaaccag 
      aactcgccg gtgccgggc tccaccaac tccatcccg 
      gcccactcg ccatcgcag cagagcaac agcagccaa 
      aaccacgtc atacaacaa caaccacaa aaccaacaa 
      caaccccaa caacaacaa caacaacaa aactcggta 
      cagcaacaa aacaacggc caacaacaa cagcagcaa 
      caacagcaa ccgaatcaa caacagcaa cagcaacag 
      caacagcag caactgggc agtcccaac tcgcaggtg 
      gcgcaggcc catgcccat gccctggcc caggtccag 
      gcccaacag cagttggtg cacatgtca caacagcac 
      caactcaac gctgggcaa aattcgccg gacaaaatg 
      gccgaaaag ttggtcaat gatttgcag attttcatg 
      cacaaatct gcgatgcaa atgcatgcc agggagctg 
      acgggacgc tcagaagtc aaaccacac cagtgccag 
      caatgtcta aagtctttc agcagcaat caccagtta 
      gtccaacat atcagggtg cacacgggg gaaaaaccc 
      tacaaatgt tcctattgt gacaggagg ttcaagcag 
      ttgagtcac gtgcaacag cacacgagg ctacatacg 
      ggtgagagg ccctacaag tgccacttg cctgactgc 
      ggaagggcc tttatccaa ctgtccaac cttcagcag 
      catctcaga aaccacgac gctcaggtc gaaagggcc 
      aaaaacagg cccttccac tgcaccatc tgtggaaaa 
      gggttcgcc accgagtcc agtctaagg acccatacg 
      tcgaaagta agccatcaa catgcagct ctgattggt 
      ggacccaac gccacttct tgtccgctt tgccataag 
      atgttctta ggaggagag gcgctcatg gagcacatg 
      aagcacaca cacaaggac cccaatgcc tcgggggtt 
      gccacgaag agaaggaca gcgaatcat ccttgtccc 
      gtttgtgga aagcattat gtgaatgaa ggatccctc 
      aggaaacat ttggcgtgc catcccgaa acgtcacaa 
      ttgtcaagt tcgttgaga atgtggccg tgttctgtt 
      tgtcaagca gtttttacg cacgaatca ggtcttctc 
      acgcacatg gagcacatg aggatggac accaagcac 
      cagttcgcc gcccaatat gtgctgtca cgcgccgcc 
      gccgaaagg agagaacga gagactttg ctggcggcc 
      gtttccgct tccgcctcc gggagcggc cttctaggc 
      ctcacagga atggccggg gcagcgagc ggtagccca 
      atgtgtgca tcccccagc gctcacagt gacagttcc 
      tcaggcaat ggccgcctt tcctctgcc ggttcagaa 
      gccggcggt cttaacaac aacaacaac aattgtaca 
      acaaaactg aacgagatt ttacggagc aacaacggt 
      ctccaccaa cagtacaac gtcgaagaa cagtttcat 
      aatgctaac agaatggcc gtcattgcc aacatggtg 
      ggccaaggg ggggttccc ccaggactc ggctccgac 
      tcgtcggcc gctgccaac atcgccgcc gccaatatt 
      gccaacctt gccatgcgc ctcggcgtc acacaggcc 
      aatcaggtg aataacagc agcaacccc tcaacgccc 
      cccatcaac aatgacact ctttccgcg tccatgaac 
      gcgatgaac gccatgcgg gcgtccatg gacagcata 
      agaaacatg gacgcgatg cggtcgtcg gtcatggac 
      atgtcgtcg cctcagcag tcccagcag cagcaggac 
      gcgctcagg atgcagcag cacgccgag gcgctgctg 
      cggtcgcag gccgaggcg gcgctcaga ctggccatg 
      agccaggcg ctgccccag ctgaaccag caccagcag 
      gacaacggc agccccctg cggcacaac ggcaactat 
      cagccgcac caagggcag tcgtcgcag cagctgagt 
      ccggacctg accgaggcc ctgcggctg caggagcag 
      cggctggag caggccctg cggctgcac gggagcgac 
      ccccggact ctgggcttc tccctcagc agccagcag 
      cagaaccaa cagccatga
    • >TC030900 RC
      atggccgag gtcaacaac aggcccgtc ttcaagatg 
      aacaacgac ttctggaac caggcccgc ggcccgccc 
      cagagcatg gcccagaac ttgtccaac tcgaaccag 
      aactcgccg gtgccgggc tccaccaac tccatcccg 
      gcccactcg ccatcgcag cagagcaac agcagccaa 
      aaccacgtc atacaacaa caaccacaa aaccaacaa 
      caaccccaa caacaacaa caacaacaa aactcggta 
      cagcaacaa aacaacggc caacaacaa cagcagcaa 
      caacagcaa ccgaatcaa caacagcaa cagcaacag 
      caacagcag caactgggc agtcccaac tcgcaggtg 
      gcgcaggcc catgcccat gccctggcc caggtccag 
      gcccaacag cagttggtg cacatgtca caacagcac 
      caactcaac gctgggcaa aattcgccg gacaaaatg 
      gccgaaaag ttggtcaat gatttgcag ttgctttcc 
      caactaacg ctgccggac tttaaccaa ctgcagagg 
      aattcgact tcttcggcc atctccgaa aggacgctt 
      gaagaatgt tggaccaca ctgcagcga attttcatg 
      cacaaatct gcgatgcaa atgcatgcc agggagctg 
      acgggacgc tcagaagtc aaaccacac cagtgccag 
      caatgtcta aagtctttc agcagcaat caccagtta 
      gtccaacat atcagggtg cacacgggg gaaaaaccc 
      tacaaatgt tcctattgt gacaggagg ttcaagcag 
      ttgagtcac gtgcaacag cacacgagg ctacatacg 
      ggtgagagg ccctacaag tgccacttg cctgactgc 
      ggaagggcc tttatccaa ctgtccaac cttcagcag 
      catctcaga aaccacgac gctcaggtc gaaagggcc 
      aaaaacagg cccttccac tgcaccatc tgtggaaaa 
      gggttcgcc accgagtcc agtctaagg acccatacg 
      tcgaaagta agccattgt attggtcgt ttgcagcaa 
      catgcagct ctgattggt ggacccaac gccacttct 
      tgtccgctt tgccataag atgttctta ggaggagag 
      gcgctcatg gagcacatg aagcacaca cacaaggac 
      cccaatgcc tcgggggtt gccacgaag agaaggaca 
      gcgaatcat ccttgtccc gtttgtgga aagcattat 
      gtgaatgaa ggatccctc aggaaacat ttggcgtgc 
      catcccgaa acgtcacaa ttgtcaagt tcgttgaga 
      atgtggccg tgttctgtt tgtcaagca gtttttacg 
      cacgaatca ggtcttctc acgcacatg gagcacatg 
      aggatggac accaagcac cagttcgcc gcccaatat 
      gtgctgtca cgcgccgcc gccgaaagg agagaacga 
      gagactttg ctggcggcc gtttccgct tccgcctcc 
      gggagcggc cttctaggc ctcacagga atggccggg 
      gcagcgagc ggtagccca atgtgtgca tcccccagc 
      gctcacagt gacagttcc tcaggcaat ggccgcctt 
      tcctctgcc ggttcagaa gccggcggt cttaacaac 
      aacaacaac aattgtaca acaaaactg aacgagatt 
      ttacggagc aacaacggt ctccaccaa cagtacaac 
      gtcgaagaa cagtttcat aatgctaac agaatggcc 
      gtcattgcc aacatggtg ggccaaggg ggggttccc 
      ccaggactc ggctccgac tcgtcggcc gctgccaac 
      atcgccgcc gccaatatt gccaacctt gccatgcgc 
      ctcggcgtc acacaggcc aatcaggtg aataacagc 
      agcaacccc tcaacgccc cccatcaac aatgacact 
      ctttccgcg tccatgaac gcgatgaac gccatgcgg 
      gcgtccatg gacagcata agaaacatg gacgcgatg 
      cggtcgtcg gtcatggac atgtcgtcg cctcagcag 
      tcccagcag cagcaggac gcgctcagg atgcagcag 
      cacgccgag gcgctgctg cggtcgcag gccgaggcg 
      gcgctcaga ctggccatg agccaggcg ctgccccag 
      ctgaaccag caccagcag gacaacggc agccccctg 
      cggcacaac ggcaactat cagccgcac caagggcag 
      tcgtcgcag cagctgagt ccggacctg accgaggcc 
      ctgcggctg caggagcag cggctggag caggccctg 
      cggctgcac gggagcgac ccccggact ctgggcttc 
      tccctcagc agccagcag cagaaccaa cagccatga
    mRNA sequence
    • >TC030900 RA
      ccggagtgc acaggtgat ccgattttt gtgaggttc 
      aagtggcat aatgtggct caaagtgac cgatgattg 
      gaattgagt aaagcgatc ggtaccaat ccggactcg 
      tatttcgtc atcgtctcc gaacccctt taccacgac 
      gccaataac ccagccatc gcgctcgcc acaccgtca 
      accggccac cacatccac ccctagtcc catcgtcgg 
      tactagagc aaaattagt gccgttcga gcgttggct 
      gcgccttct tcttccgtc aaataaagt cgtcgtccc 
      tcacgggcc gtattctcg ccttttccc gccccgccg 
      tcaacattt tcaacacgg aggaccaaa atctaatca 
      acaatctca aggtcgaac atgaaaacc tcgtagcga 
      agtggctgc agaactcat tcaaggccc aggagaacg 
      ccgcactgg acctccggt cgacgccgc tgtcgctgc 
      agataccga tggccgagg tcaacaaca ggcccgtct 
      tcaagatga acaacgact tctggaacc aggcccgcg 
      gcccgcccc agagcatgg cccagaact tgtccaact 
      cgaaccaga actcgccgg tgccgggct ccaccaact 
      ccatcccgg cccactcgc catcgcagc agagcaaca 
      gcagccaaa accacgtca tacaacaac aaccacaaa 
      accaacaac aaccccaac aacaacaac aacaacaaa 
      actcggtac agcaacaaa acaacggcc aacaacaac 
      agcagcaac aacagcaac cgaatcaac aacagcaac 
      agcaacagc aacagcagc aactgggca gtcccaact 
      cgcaggtgg cgcaggccc atgcccatg ccctggccc 
      aggtccagg cccaacagc agttggtgc acatgtcac 
      aacagcacc aactcaacg ctgggcaaa attcgccgg 
      acaaaatgg ccgaaaagt tggtcaatg atttgcaga 
      ttttcatgc acaaatctg cgatgcaaa tgcatgcca 
      gggagctga cgggacgct cagaagtca aaccacacc 
      agtgccagc aatgtctaa agtctttca gcagcaatc 
      accagttag tccaacata tcagggtgc acacggggg 
      aaaaaccct acaaatgtt cctattgtg acaggaggt 
      tcaagcagt tgagtcacg tgcaacagc acacgaggc 
      tacatacgg gtgagaggc cctacaagt gccacttgc 
      ctgactgcg gaagggcct ttatccaac tgtccaacc 
      ttcagcagc atctcagaa accacgacg ctcaggtcg 
      aaagggcca aaaacaggc ccttccact gcaccatct 
      gtggaaaag ggttcgcca ccgagtcca gtctaagga 
      cccatacgt cgaaagtaa gccattgta ttggtcgtt 
      tgcagcaac atgcagctc tgattggtg gacccaacg 
      ccacttctt gtccgcttt gccataaga tgttcttag 
      gaggagagg cgctcatgg agcacatga agcacacac 
      acaaggacc ccaatgcct cgggggttg ccacgaaga 
      gaaggacag cgaatcatc cttgtcccg tttgtggaa 
      agcattatg tgaatgaag gatccctca ggaaacatt 
      tggcgtgcc atcccgaaa cgtcacaat tgtcaagtt 
      cgttgagaa tgtggccgt gttctgttt gtcaagcag 
      tttttacgc acgaatcag gtcttctca cgcacatgg 
      agcacatga ggatggaca ccaagcacc agttcgccg 
      cccaatatg tgctgtcac gcgccgccg ccgaaagga 
      gagaacgag agactttgc tggcggccg tttccgctt 
      ccgcctccg ggagcggcc ttctaggcc tcacaggaa 
      tggccgggg cagcgagcg gtagcccaa tgtgtgcat 
      cccccagcg ctcacagtg acagttcct caggcaatg 
      gccgccttt cctctgccg gttcagaag ccggcggtc 
      ttaacaaca acaacaaca attgtacaa caaaactga 
      acgagattt tacggagca acaacggtc tccaccaac 
      agtacaacg tcgaagaac agtttcata atgctaaca 
      gaatggccg tcattgcca acatggtgg gccaagggg 
      gggttcccc caggactcg gctccgact cgtcggccg 
      ctgccaaca tcgccgccg ccaatattg ccaaccttg 
      ccatgcgcc tcggcgtca cacaggcca atcaggtga 
      ataacagca gcaacccct caacgcccc ccatcaaca 
      atgacactc tttccgcgt ccatgaacg cgatgaacg 
      ccatgcggg cgtccatgg acagcataa gaaacatgg 
      acgcgatgc ggtcgtcgg tcatggaca tgtcgtcgc 
      ctcagcagt cccagcagc agcaggacg cgctcagga 
      tgcagcagc acgccgagg cgctgctgc ggtcgcagg 
      ccgaggcgg cgctcagac tggccatga gccaggcgc 
      tgccccagc tgaaccagc accagcagg acaacggca 
      gccccctgc ggcacaacg gcaactatc agccgcacc 
      aagggcagt cgtcgcagc agctgagtc cggacctga 
      ccgaggccc tgcggctgc aggagcagc ggctggagc 
      aggccctgc ggctgcacg ggagcgacc cccggactc 
      tgggcttct ccctcagca gccagcagc agaaccaac 
      agccatgaa actttaact actactgaa cgcaaaagt 
      acaatcggc cgccatctt ccattcagc ggccatctt 
      ccagcacgg acgccatat tcgaaaatg tgccaaatt 
      tttgatgcg ctcagtata ctactaatg gccaagcca 
      ttactaaac gcactttac aagtgcacc aactacaca 
      aatcaagag gagaaatca tttaaacaa tgtatagta 
      actaagtgt tggagataa atacctaaa gtaagtgtt 
      tttaggtaa cgttaagta aagcaaata cttaatgca 
      taactatat ttaaggata agctgtaaa tataaagat 
      tgttttaga agaagaaat tcggaatga atgatagag 
      aatttgtaa ttataaagc gcgatgtaa gtacgaggt 
      tttatttac aaaaaatgc gaaaagaat caaatttca 
      cgaggaaaa acttttttt gcaaactgt gattttagt 
      tatttggcc ggttataaa cacgctagc aataaatcg 
      aggaaaaat ca
    • >TC030900 RB
      ccggagtgc acaggtgat ccgattttt gtgaggttc 
      aagtggcat aatgtggct caaagtgac cgatgattg 
      gaattgagt aaagcgatc ggtaccaat ccggactcg 
      tatttcgtc atcgtctcc gaacccctt taccacgac 
      gccaataac ccagccatc gcgctcgcc acaccgtca 
      accggccac cacatccac ccctagtcc catcgtcgg 
      tactagagc aaaattagt gccgttcga gcgttggct 
      gcgccttct tcttccgtc aaataaagt cgtcgtccc 
      tcacgggcc gtattctcg ccttttccc gccccgccg 
      tcaacattt tcaacacgg aggaccaaa atctaatca 
      acaatctca aggtcgaac atgaaaacc tcgtagcga 
      agtggctgc agaactcat tcaaggccc aggagaacg 
      ccgcactgg acctccggt cgacgccgc tgtcgctgc 
      agataccga tggccgagg tcaacaaca ggcccgtct 
      tcaagatga acaacgact tctggaacc aggcccgcg 
      gcccgcccc agagcatgg cccagaact tgtccaact 
      cgaaccaga actcgccgg tgccgggct ccaccaact 
      ccatcccgg cccactcgc catcgcagc agagcaaca 
      gcagccaaa accacgtca tacaacaac aaccacaaa 
      accaacaac aaccccaac aacaacaac aacaacaaa 
      actcggtac agcaacaaa acaacggcc aacaacaac 
      agcagcaac aacagcaac cgaatcaac aacagcaac 
      agcaacagc aacagcagc aactgggca gtcccaact 
      cgcaggtgg cgcaggccc atgcccatg ccctggccc 
      aggtccagg cccaacagc agttggtgc acatgtcac 
      aacagcacc aactcaacg ctgggcaaa attcgccgg 
      acaaaatgg ccgaaaagt tggtcaatg atttgcaga 
      ttttcatgc acaaatctg cgatgcaaa tgcatgcca 
      gggagctga cgggacgct cagaagtca aaccacacc 
      agtgccagc aatgtctaa agtctttca gcagcaatc 
      accagttag tccaacata tcagggtgc acacggggg 
      aaaaaccct acaaatgtt cctattgtg acaggaggt 
      tcaagcagt tgagtcacg tgcaacagc acacgaggc 
      tacatacgg gtgagaggc cctacaagt gccacttgc 
      ctgactgcg gaagggcct ttatccaac tgtccaacc 
      ttcagcagc atctcagaa accacgacg ctcaggtcg 
      aaagggcca aaaacaggc ccttccact gcaccatct 
      gtggaaaag ggttcgcca ccgagtcca gtctaagga 
      cccatacgt cgaaagtaa gccatcaac atgcagctc 
      tgattggtg gacccaacg ccacttctt gtccgcttt 
      gccataaga tgttcttag gaggagagg cgctcatgg 
      agcacatga agcacacac acaaggacc ccaatgcct 
      cgggggttg ccacgaaga gaaggacag cgaatcatc 
      cttgtcccg tttgtggaa agcattatg tgaatgaag 
      gatccctca ggaaacatt tggcgtgcc atcccgaaa 
      cgtcacaat tgtcaagtt cgttgagaa tgtggccgt 
      gttctgttt gtcaagcag tttttacgc acgaatcag 
      gtcttctca cgcacatgg agcacatga ggatggaca 
      ccaagcacc agttcgccg cccaatatg tgctgtcac 
      gcgccgccg ccgaaagga gagaacgag agactttgc 
      tggcggccg tttccgctt ccgcctccg ggagcggcc 
      ttctaggcc tcacaggaa tggccgggg cagcgagcg 
      gtagcccaa tgtgtgcat cccccagcg ctcacagtg 
      acagttcct caggcaatg gccgccttt cctctgccg 
      gttcagaag ccggcggtc ttaacaaca acaacaaca 
      attgtacaa caaaactga acgagattt tacggagca 
      acaacggtc tccaccaac agtacaacg tcgaagaac 
      agtttcata atgctaaca gaatggccg tcattgcca 
      acatggtgg gccaagggg gggttcccc caggactcg 
      gctccgact cgtcggccg ctgccaaca tcgccgccg 
      ccaatattg ccaaccttg ccatgcgcc tcggcgtca 
      cacaggcca atcaggtga ataacagca gcaacccct 
      caacgcccc ccatcaaca atgacactc tttccgcgt 
      ccatgaacg cgatgaacg ccatgcggg cgtccatgg 
      acagcataa gaaacatgg acgcgatgc ggtcgtcgg 
      tcatggaca tgtcgtcgc ctcagcagt cccagcagc 
      agcaggacg cgctcagga tgcagcagc acgccgagg 
      cgctgctgc ggtcgcagg ccgaggcgg cgctcagac 
      tggccatga gccaggcgc tgccccagc tgaaccagc 
      accagcagg acaacggca gccccctgc ggcacaacg 
      gcaactatc agccgcacc aagggcagt cgtcgcagc 
      agctgagtc cggacctga ccgaggccc tgcggctgc 
      aggagcagc ggctggagc aggccctgc ggctgcacg 
      ggagcgacc cccggactc tgggcttct ccctcagca 
      gccagcagc agaaccaac agccatgaa actttaact 
      actactgaa cgcaaaagt acaatcggc cgccatctt 
      ccattcagc ggccatctt ccagcacgg acgccatat 
      tcgaaaatg tgccaaatt tttgatgcg ctcagtata 
      ctactaatg gccaagcca ttactaaac gcactttac 
      aagtgcacc aactacaca aatcaagag gagaaatca 
      tttaaacaa tgtatagta actaagtgt tggagataa 
      atacctaaa gtaagtgtt tttaggtaa cgttaagta 
      aagcaaata cttaatgca taactatat ttaaggata 
      agctgtaaa tataaagat tgttttaga agaagaaat 
      tcggaatga atgatagag aatttgtaa ttataaagc 
      gcgatgtaa gtacgaggt tttatttac aaaaaatgc 
      gaaaagaat caaatttca cgaggaaaa acttttttt 
      gcaaactgt gattttagt tatttggcc ggttataaa 
      cacgctagc aataaatcg aggaaaaat ca
    • >TC030900 RC
      ccggagtgc acaggtgat ccgattttt gtgaggttc 
      aagtggcat aatgtggct caaagtgac cgatgattg 
      gaattgagt aaagcgatc ggtaccaat ccggactcg 
      tatttcgtc atcgtctcc gaacccctt taccacgac 
      gccaataac ccagccatc gcgctcgcc acaccgtca 
      accggccac cacatccac ccctagtcc catcgtcgg 
      tactagagc aaaattagt gccgttcga gcgttggct 
      gcgccttct tcttccgtc aaataaagt cgtcgtccc 
      tcacgggcc gtattctcg ccttttccc gccccgccg 
      tcaacattt tcaacacgg aggaccaaa atctaatca 
      acaatctca aggtcgaac atgaaaacc tcgtagcga 
      agtggctgc agaactcat tcaaggccc aggagaacg 
      ccgcactgg acctccggt cgacgccgc tgtcgctgc 
      agataccga tggccgagg tcaacaaca ggcccgtct 
      tcaagatga acaacgact tctggaacc aggcccgcg 
      gcccgcccc agagcatgg cccagaact tgtccaact 
      cgaaccaga actcgccgg tgccgggct ccaccaact 
      ccatcccgg cccactcgc catcgcagc agagcaaca 
      gcagccaaa accacgtca tacaacaac aaccacaaa 
      accaacaac aaccccaac aacaacaac aacaacaaa 
      actcggtac agcaacaaa acaacggcc aacaacaac 
      agcagcaac aacagcaac cgaatcaac aacagcaac 
      agcaacagc aacagcagc aactgggca gtcccaact 
      cgcaggtgg cgcaggccc atgcccatg ccctggccc 
      aggtccagg cccaacagc agttggtgc acatgtcac 
      aacagcacc aactcaacg ctgggcaaa attcgccgg 
      acaaaatgg ccgaaaagt tggtcaatg atttgcagt 
      tgctttccc aactaacgc tgccggact ttaaccaac 
      tgcagagga attcgactt cttcggcca tctccgaaa 
      ggacgcttg aagaatgtt ggaccacac tgcagcgaa 
      ttttcatgc acaaatctg cgatgcaaa tgcatgcca 
      gggagctga cgggacgct cagaagtca aaccacacc 
      agtgccagc aatgtctaa agtctttca gcagcaatc 
      accagttag tccaacata tcagggtgc acacggggg 
      aaaaaccct acaaatgtt cctattgtg acaggaggt 
      tcaagcagt tgagtcacg tgcaacagc acacgaggc 
      tacatacgg gtgagaggc cctacaagt gccacttgc 
      ctgactgcg gaagggcct ttatccaac tgtccaacc 
      ttcagcagc atctcagaa accacgacg ctcaggtcg 
      aaagggcca aaaacaggc ccttccact gcaccatct 
      gtggaaaag ggttcgcca ccgagtcca gtctaagga 
      cccatacgt cgaaagtaa gccattgta ttggtcgtt 
      tgcagcaac atgcagctc tgattggtg gacccaacg 
      ccacttctt gtccgcttt gccataaga tgttcttag 
      gaggagagg cgctcatgg agcacatga agcacacac 
      acaaggacc ccaatgcct cgggggttg ccacgaaga 
      gaaggacag cgaatcatc cttgtcccg tttgtggaa 
      agcattatg tgaatgaag gatccctca ggaaacatt 
      tggcgtgcc atcccgaaa cgtcacaat tgtcaagtt 
      cgttgagaa tgtggccgt gttctgttt gtcaagcag 
      tttttacgc acgaatcag gtcttctca cgcacatgg 
      agcacatga ggatggaca ccaagcacc agttcgccg 
      cccaatatg tgctgtcac gcgccgccg ccgaaagga 
      gagaacgag agactttgc tggcggccg tttccgctt 
      ccgcctccg ggagcggcc ttctaggcc tcacaggaa 
      tggccgggg cagcgagcg gtagcccaa tgtgtgcat 
      cccccagcg ctcacagtg acagttcct caggcaatg 
      gccgccttt cctctgccg gttcagaag ccggcggtc 
      ttaacaaca acaacaaca attgtacaa caaaactga 
      acgagattt tacggagca acaacggtc tccaccaac 
      agtacaacg tcgaagaac agtttcata atgctaaca 
      gaatggccg tcattgcca acatggtgg gccaagggg 
      gggttcccc caggactcg gctccgact cgtcggccg 
      ctgccaaca tcgccgccg ccaatattg ccaaccttg 
      ccatgcgcc tcggcgtca cacaggcca atcaggtga 
      ataacagca gcaacccct caacgcccc ccatcaaca 
      atgacactc tttccgcgt ccatgaacg cgatgaacg 
      ccatgcggg cgtccatgg acagcataa gaaacatgg 
      acgcgatgc ggtcgtcgg tcatggaca tgtcgtcgc 
      ctcagcagt cccagcagc agcaggacg cgctcagga 
      tgcagcagc acgccgagg cgctgctgc ggtcgcagg 
      ccgaggcgg cgctcagac tggccatga gccaggcgc 
      tgccccagc tgaaccagc accagcagg acaacggca 
      gccccctgc ggcacaacg gcaactatc agccgcacc 
      aagggcagt cgtcgcagc agctgagtc cggacctga 
      ccgaggccc tgcggctgc aggagcagc ggctggagc 
      aggccctgc ggctgcacg ggagcgacc cccggactc 
      tgggcttct ccctcagca gccagcagc agaaccaac 
      agccatgaa actttaact actactgaa cgcaaaagt 
      acaatcggc cgccatctt ccattcagc ggccatctt 
      ccagcacgg acgccatat tcgaaaatg tgccaaatt 
      tttgatgcg ctcagtata ctactaatg gccaagcca 
      ttactaaac gcactttac aagtgcacc aactacaca 
      aatcaagag gagaaatca tttaaacaa tgtatagta 
      actaagtgt tggagataa atacctaaa gtaagtgtt 
      tttaggtaa cgttaagta aagcaaata cttaatgca 
      taactatat ttaaggata agctgtaaa tataaagat 
      tgttttaga agaagaaat tcggaatga atgatagag 
      aatttgtaa ttataaagc gcgatgtaa gtacgaggt 
      tttatttac aaaaaatgc gaaaagaat caaatttca 
      cgaggaaaa acttttttt gcaaactgt gattttagt 
      tatttggcc ggttataaa cacgctagc aataaatcg 
      aggaaaaat ca
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