Status
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Gene information
General information
TC013589 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007416.3: 3360990..3387662
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC013589
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
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    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
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    Publish name
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    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_05459

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 20.0% (includes death as pupa, adult)

    pupa eclosion not fulfilled (died as pupa) - Number of animals showing the phenotype: 1 (3 dpi)
    Days post injection


    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 1 (3 dpi)
    Days post injection


    Analysis of embryonic musculature and early development
    number of eggs/embryos/larvae on slide: > 50 embryo/egg with embryonic tissue, no cuticle, but muscle fluorescence - Penetrance (percentage of animals/eggs on slide): less than 30%

    embryo/egg not developed/not fertilized - Penetrance (percentage of animals/eggs on slide): less than 30%

    affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: > 50
    cuticle remnants with unidentifyable segments - Penetrance (percentage of animals/eggs on slide): less than 30%

    labrum slightlyorientation irregular - Penetrance (percentage of animals/eggs on slide): 30% - 50%

    head irregular - Penetrance (percentage of animals/eggs on slide): less than 30%

    affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 0.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 14.29% (includes death as larva, prepupa, pupa, adult)

    Adult morphology
    elytra partially surface blistered - Number of animals showing the phenotype: 9


    wings not closed - Number of animals showing the phenotype: 2


    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC013589 RA
      MDENEQELK SPIKRLGST RKLLVFNNI RLQLNEQLR 
      CLDMRMEAQ VALVTELQD FFRRRGELE LDYSKNLDK 
      LAKSLQLRH KEQKQKREQ WPLFSSYTC WQQLVTQTK 
      NLSRDHVAL SEVYSTHLV SRLSQVMED VQRIYKRCR 
      EIGYETHEE ILRVLHELH TTMKTYHSY QAELRQAEA 
      KLKSAETQR AKLEQSLSQ DKLDRSKKY KLMEKEVMK 
      RKNKYTDAK LKALKARNE YILCLEASN TTIHKYFVD 
      DLSDLIDCM DFGFHNCIS RALLMHVTA EEGRQRSVQ 
      NGLDTLSAC INSLDSRLD KQRFLEYNH TAFMIPKKL 
      EFQGQKQEE PAEPEIQKV LHQEMESRL RQLQQRVTS 
      LRTESEEVW KTLETAEST LLEMLNAKD YDCSAYFGE 
      NAVPASKPP ETVSIKLRA DRQETEEFY LTKFREYLL 
      GSTKIARLD AKQEYIRQS LLSEAPDYC STLKPVVKT 
      PRRKRIGRL QMSGQPKLF GGSLEEYLE ATNQDIPLI 
      MKSCIRVIN LYGLHHQGI FRVSGSQVE INNFREWFE 
      RGEDPLADM TDASDINSV AGVLKLYLR ELREPLFPI 
      IYFEQFMEL AQLESKREF IVRMKELIN SLPRTVIVV 
      MRYLFAFLN HLSEFSDEN MMDPYNLAI CFGPTLVPV 
      PDDKDQVQY QNQVNELIK NIIMFNEEI FPNDGGTVY 
      EKYISPEPD DHDVGDLPS DQVPEDLDS EVYPSEDDS 
      ENMEATAQF DFIARSDRE LSLKKGDTV TLYSQVSND 
      WWKGSVKGQ EGLIPDKYI SLKMKDDDR EKLENLKSS 
      SSEESMRRR VSSSNDSML SESSVSASN SPLVQCAPV 
      TWTNVSDMN ESISSENNS VILNQTREN GHNRLKSLD 
      ISLESHLLN RMRDPVVTI NVNQTPQNI TINGSPVMQ 
      SRKLEKSET VPEIGKSET DIELRHKSE IDESNLNFS 
      QNREQWQRR AVSQSHIPL SQPQTLKAN RNSESYLQR 
      QNHTPDLVM DLPLVGNSS PKETTKKSM SVSGNLTSE 
      GPLGDESHK SPESPDMQT AAERFAKQN QCTLKKNTK 
      VHVDSSDSA ETNLITITS PMPERKYAT IGSATTTFK 
      PQLKAKPPV LKKPAFSVP MAAVSSEVR KDQPDLPT
    • >TC013589 RB
      MFQCIIQQK NGWIHPHNT ETKDVFPDI RLQLNEQLR 
      CLDMRMEAQ VALVTELQD FFRRRGELE LDYSKNLDK 
      LAKSLQLRH KEQKQKREQ WPLFSSYTC WQQLVTQTK 
      NLSRDHVAL SEVYSTHLV SRLSQVMED VQRIYKRCR 
      EIGYETHEE ILRVLHELH TTMKTYHSY QAELRQAEA 
      KLKSAETQR AKLEQSLSQ DKLDRSKKY KLMEKEVMK 
      RKNKYTDAK LKALKARNE YILCLEASN TTIHKYFVD 
      DLSDLIDCM DFGFHNCIS RALLMHVTA EEGRQRSVQ 
      NGLDTLSAC INSLDSRLD KQRFLEYNH TAFMIPKKL 
      EFQGQKQEE PAEPEIQKV LHQEMESRL RQLQQRVTS 
      LRTESEEVW KTLETAEST LLEMLNAKD YDCSAYFGE 
      NAVPASKPP ETVSIKLRA DRQETEEFY LTKFREYLL 
      GSTKIARLD AKQEYIRQS LLSEAPDYC STLKPVVKT 
      PRRKRIGRL QMSGQPKLF GGSLEEYLE ATNQDIPLI 
      MKSCIRVIN LYGLHHQGI FRVSGSQVE INNFREWFE 
      RGEDPLADM TDASDINSV AGVLKLYLR ELREPLFPI 
      IYFEQFMEL AQLESKREF IVRMKELIN SLPRTVIVV 
      MRYLFAFLN HLSEFSDEN MMDPYNLAI CFGPTLVPV 
      PDDKDQVQY QNQVNELIK NIIMFNEEI FPNDGGTVY 
      EKYISPEPD DHDVGDLPS DQVPEDLDS EVYPSEDDS 
      ENMEATAQF DFIARSDRE LSLKKGDTV TLYSQVSND 
      WWKGSVKGQ EGLIPDKYI SLKMKDDDR EKLENLKSS 
      SSEESMRRR VSSSNDSML SESSVSASN SPLVQCAPV 
      TWTNVSDMN ESISSENNS VILNQTREN GHNRLKSLD 
      ISLESHLLN RMRDPVVTI NVNQTPQNI TINGSPVMQ 
      SRKLEKSET VPEIGKSET DIELRHKSE IDESNLNFS 
      QNREQWQRR AVSQSHIPL SQPQTLKAN RNSESYLQR 
      QNHTPDLVM DLPLVGNSS PKETTKKSM SVSGNLTSE 
      GPLGDESHK SPESPDMQT AAERFAKQN QCTLKKNTK 
      VHVDSSDSA ETNLITITS PMPERKYAT IGSATTTFK 
      PQLKAKPPV LKKPAFSVP MAAVSSEVR KDQPDLPT
    CDS sequence
    • >TC013589 RA
      atggatgaa aatgagcaa gaattgaaa tcaccaatc 
      aaacggctg ggatccacg agaaaactt ttggttttt 
      aacaatatc cgtttgcaa ctcaacgag cagttgcga 
      tgtctagat atgcgaatg gaggcccag gtcgctcta 
      gtaacggag ttgcaagac tttttccgg cgcagaggt 
      gaactagaa ctcgactat tcgaaaaat ttagataaa 
      ctagcgaaa agcttgcag cttcggcac aaggaacaa 
      aaacaaaaa cgagaacaa tggccttta ttttcgagt 
      tatacgtgt tggcaacaa ttagtaacg cagactaaa 
      aatctaagc agggatcat gtagcttta tccgaagtt 
      tactccacg catttggtc tccaggctg tcgcaggtc 
      atggaggac gtccagagg atctacaag aggtgccgg 
      gaaatcgga tacgagact cacgaggag atactacgt 
      gtcttgcac gagcttcac acaacaatg aaaacatat 
      cacagttat caggcggaa ctgcgccaa gcggaggcc 
      aagctaaaa tcagccgaa acccaaaga gcgaaatta 
      gagcagtcc ctgtcccag gacaagtta gataggtcg 
      aaaaagtac aagctgatg gagaaggaa gtgatgaag 
      cgcaaaaac aaatacacg gatgcgaaa ttgaaagct 
      ctcaaagcc cggaacgag tatatttta tgtttagag 
      gcttccaac accacaatc cacaaatac ttcgtcgac 
      gatttatcc gatctcatt gattgcatg gatttcggt 
      ttccacaac tgcatatcc cgggcgctt ctgatgcac 
      gtaacggcg gaggagggc cgccagagg tcggtccag 
      aacggctta gacacccta tcagcgtgc attaattcc 
      ctagactcg agattagac aaacagcgg ttccttgag 
      tacaaccac acggcgttc atgattccg aaaaaactc 
      gaattccaa ggacagaag caggaagag cccgctgaa 
      ccagaaatc caaaaagtc ctgcaccag gagatggag 
      agccgatta cgccagctg cagcaaagg gtgacctcg 
      ctcaggacc gagtcggag gaggtctgg aagacgctg 
      gaaaccgcc gaatccacc ctgctggag atgctcaac 
      gcgaaagac tacgactgt agcgcctat tttggcgaa 
      aacgcggtg ccagccagc aaaccgccc gaaaccgtc 
      tccatcaag ctacgggcg gaccggcag gagaccgaa 
      gagttctat ctaacgaaa ttccgagag tatttattg 
      ggatcaaca aaaatcgct cgcctagac gctaagcaa 
      gagtacata agacaatcg ctgctgtcc gaagcgccc 
      gactattgt agcaccctt aaaccagtc gtcaagact 
      ccccgccgg aaacgaatc ggtcggctg caaatgagt 
      ggccagccg aagttgttt ggcgggtcc ttagaggag 
      tatttggag gccacgaat caagacatt cctctcatt 
      atgaagtct tgcattagg gttattaat ttatacggt 
      ctacaccac cagggtatt ttccgggtg tcggggtcc 
      caagtcgag ataaataac ttcagggag tggttcgaa 
      cggggcgaa gatccgctc gctgatatg acggacgcg 
      tctgatatc aacagcgtg gcgggggtt ttgaaactg 
      tatctgcgg gaactgcgc gagccgctc ttcccgatc 
      atttatttc gaacaattc atggagctt gcacaatta 
      gagtctaag cgggaattc attgttagg atgaaggag 
      cttatcaat agtttacca agaactgtg atagttgtg 
      atgcggtac ctcttcgcc ttccttaac cacttgtcg 
      gagttttcc gacgagaac atgatggat ccttacaac 
      ctagccatt tgttttggg ccgacgcta gtgccggtt 
      cccgacgac aaggaccaa gttcagtac cagaaccaa 
      gttaacgaa ctcattaag aatattatt atgtttaac 
      gaggaaatt ttccccaac gacggtggc acggtctat 
      gagaagtat atatccccg gaaccggat gaccacgac 
      gttggggat ctgccatct gaccaggtg ccagaagac 
      ctggactcc gaagtatac ccatctgaa gatgattct 
      gaaaacatg gaagcgacg gcgcagttc gacttcatc 
      gcaaggtct gaccgagaa ctgtcgctg aagaaaggc 
      gacaccgtg acgttgtat tcccaagtg tcgaacgac 
      tggtggaag gggtcggtt aaggggcag gaagggttg 
      attccagac aaatatata tctctaaaa atgaaagat 
      gatgatcga gagaagctg gaaaacctg aaatcgagc 
      tcgtctgag gagtcgatg cggcggaga gtctccagt 
      tcgaacgac tcgatgttg tccgagagc tccgtctct 
      gcgagcaat tcgccccta gtgcagtgc gccccagtg 
      acatggact aacgtgtca gacatgaac gaatcaatc 
      tcatccgaa aacaactca gtaatttta aaccagacg 
      agagagaac ggacacaac cgccttaaa tccctggac 
      atatctcta gaatcccac ttattgaat cgtatgcgc 
      gatcccgtc gtcaccata aacgtgaac caaaccccg 
      caaaatatc acaataaac ggttcccct gtcatgcaa 
      tcccgcaaa ttagagaag agcgaaacg gttcccgaa 
      atcggaaaa tcggagacc gacatcgaa ctgcgccac 
      aagtcggaa atcgacgaa tcgaaccta aatttcagc 
      caaaaccgc gagcagtgg cagcgccgg gcggtctcc 
      cagtcgcac atccccctg tcccagccc cagaccctg 
      aaggcgaac cggaactcc gagtcctac ctgcagcgg 
      cagaaccac actccggac ctggtcatg gacctcccc 
      ctggtcggc aactcgagt ccgaaggaa accacgaag 
      aagtccatg tccgtgtcg ggtaacttg acctctgag 
      gggccgctg ggcgacgag agccacaag tcgcccgag 
      agccccgac atgcagacg gcggccgaa cggttcgcc 
      aagcagaac caatgcacg ctcaagaag aacaccaaa 
      gttcacgtt gacagcagc gacagtgct gagacgaat 
      ctgatcacg atcactagt cccatgccc gagcgcaag 
      tatgcgacg atcgggagc gcgaccacg acgttcaag 
      ccccagctc aaagcgaaa cctccagtg ctcaagaaa 
      cccgcgttt tcggtgccc atggcggca gtctcaagc 
      gaagtacga aaagaccaa ccggatctt cccacgtaa
    • >TC013589 RB
      atgttccag tgcatcatc caacaaaag aatggctgg 
      attcacccc cataacact gagaccaaa gacgttttc 
      ccagatatc cgtttgcaa ctcaacgag cagttgcga 
      tgtctagat atgcgaatg gaggcccag gtcgctcta 
      gtaacggag ttgcaagac tttttccgg cgcagaggt 
      gaactagaa ctcgactat tcgaaaaat ttagataaa 
      ctagcgaaa agcttgcag cttcggcac aaggaacaa 
      aaacaaaaa cgagaacaa tggccttta ttttcgagt 
      tatacgtgt tggcaacaa ttagtaacg cagactaaa 
      aatctaagc agggatcat gtagcttta tccgaagtt 
      tactccacg catttggtc tccaggctg tcgcaggtc 
      atggaggac gtccagagg atctacaag aggtgccgg 
      gaaatcgga tacgagact cacgaggag atactacgt 
      gtcttgcac gagcttcac acaacaatg aaaacatat 
      cacagttat caggcggaa ctgcgccaa gcggaggcc 
      aagctaaaa tcagccgaa acccaaaga gcgaaatta 
      gagcagtcc ctgtcccag gacaagtta gataggtcg 
      aaaaagtac aagctgatg gagaaggaa gtgatgaag 
      cgcaaaaac aaatacacg gatgcgaaa ttgaaagct 
      ctcaaagcc cggaacgag tatatttta tgtttagag 
      gcttccaac accacaatc cacaaatac ttcgtcgac 
      gatttatcc gatctcatt gattgcatg gatttcggt 
      ttccacaac tgcatatcc cgggcgctt ctgatgcac 
      gtaacggcg gaggagggc cgccagagg tcggtccag 
      aacggctta gacacccta tcagcgtgc attaattcc 
      ctagactcg agattagac aaacagcgg ttccttgag 
      tacaaccac acggcgttc atgattccg aaaaaactc 
      gaattccaa ggacagaag caggaagag cccgctgaa 
      ccagaaatc caaaaagtc ctgcaccag gagatggag 
      agccgatta cgccagctg cagcaaagg gtgacctcg 
      ctcaggacc gagtcggag gaggtctgg aagacgctg 
      gaaaccgcc gaatccacc ctgctggag atgctcaac 
      gcgaaagac tacgactgt agcgcctat tttggcgaa 
      aacgcggtg ccagccagc aaaccgccc gaaaccgtc 
      tccatcaag ctacgggcg gaccggcag gagaccgaa 
      gagttctat ctaacgaaa ttccgagag tatttattg 
      ggatcaaca aaaatcgct cgcctagac gctaagcaa 
      gagtacata agacaatcg ctgctgtcc gaagcgccc 
      gactattgt agcaccctt aaaccagtc gtcaagact 
      ccccgccgg aaacgaatc ggtcggctg caaatgagt 
      ggccagccg aagttgttt ggcgggtcc ttagaggag 
      tatttggag gccacgaat caagacatt cctctcatt 
      atgaagtct tgcattagg gttattaat ttatacggt 
      ctacaccac cagggtatt ttccgggtg tcggggtcc 
      caagtcgag ataaataac ttcagggag tggttcgaa 
      cggggcgaa gatccgctc gctgatatg acggacgcg 
      tctgatatc aacagcgtg gcgggggtt ttgaaactg 
      tatctgcgg gaactgcgc gagccgctc ttcccgatc 
      atttatttc gaacaattc atggagctt gcacaatta 
      gagtctaag cgggaattc attgttagg atgaaggag 
      cttatcaat agtttacca agaactgtg atagttgtg 
      atgcggtac ctcttcgcc ttccttaac cacttgtcg 
      gagttttcc gacgagaac atgatggat ccttacaac 
      ctagccatt tgttttggg ccgacgcta gtgccggtt 
      cccgacgac aaggaccaa gttcagtac cagaaccaa 
      gttaacgaa ctcattaag aatattatt atgtttaac 
      gaggaaatt ttccccaac gacggtggc acggtctat 
      gagaagtat atatccccg gaaccggat gaccacgac 
      gttggggat ctgccatct gaccaggtg ccagaagac 
      ctggactcc gaagtatac ccatctgaa gatgattct 
      gaaaacatg gaagcgacg gcgcagttc gacttcatc 
      gcaaggtct gaccgagaa ctgtcgctg aagaaaggc 
      gacaccgtg acgttgtat tcccaagtg tcgaacgac 
      tggtggaag gggtcggtt aaggggcag gaagggttg 
      attccagac aaatatata tctctaaaa atgaaagat 
      gatgatcga gagaagctg gaaaacctg aaatcgagc 
      tcgtctgag gagtcgatg cggcggaga gtctccagt 
      tcgaacgac tcgatgttg tccgagagc tccgtctct 
      gcgagcaat tcgccccta gtgcagtgc gccccagtg 
      acatggact aacgtgtca gacatgaac gaatcaatc 
      tcatccgaa aacaactca gtaatttta aaccagacg 
      agagagaac ggacacaac cgccttaaa tccctggac 
      atatctcta gaatcccac ttattgaat cgtatgcgc 
      gatcccgtc gtcaccata aacgtgaac caaaccccg 
      caaaatatc acaataaac ggttcccct gtcatgcaa 
      tcccgcaaa ttagagaag agcgaaacg gttcccgaa 
      atcggaaaa tcggagacc gacatcgaa ctgcgccac 
      aagtcggaa atcgacgaa tcgaaccta aatttcagc 
      caaaaccgc gagcagtgg cagcgccgg gcggtctcc 
      cagtcgcac atccccctg tcccagccc cagaccctg 
      aaggcgaac cggaactcc gagtcctac ctgcagcgg 
      cagaaccac actccggac ctggtcatg gacctcccc 
      ctggtcggc aactcgagt ccgaaggaa accacgaag 
      aagtccatg tccgtgtcg ggtaacttg acctctgag 
      gggccgctg ggcgacgag agccacaag tcgcccgag 
      agccccgac atgcagacg gcggccgaa cggttcgcc 
      aagcagaac caatgcacg ctcaagaag aacaccaaa 
      gttcacgtt gacagcagc gacagtgct gagacgaat 
      ctgatcacg atcactagt cccatgccc gagcgcaag 
      tatgcgacg atcgggagc gcgaccacg acgttcaag 
      ccccagctc aaagcgaaa cctccagtg ctcaagaaa 
      cccgcgttt tcggtgccc atggcggca gtctcaagc 
      gaagtacga aaagaccaa ccggatctt cccacgtaa
    mRNA sequence
    • >TC013589 RA
      agcgacagc ggcattcta ttttgagta gagagtagc 
      atgttatgt tcaaataga cagtgtaca aatcgtttt 
      gttcgtggt agcgttcgc aacaacact cagtaacga 
      attaacgta ttcgaatta gtgcacacc gatttgaaa 
      tggcaacat tgtctcaaa tgaccactt ctcattaaa 
      tgtttttcc gagttagca acaaaacat aacttgcgt 
      ttggacgtg aaagtagtt atttttgtg tgaagacgg 
      ttttagaat tcgccagtt tgtttctta tataccggc 
      tacttattt tgtaaggat ggatgaaaa tgagcaaga 
      attgaaatc accaatcaa acggctggg atccacgag 
      aaaactttt ggtttttaa caatatccg tttgcaact 
      caacgagca gttgcgatg tctagatat gcgaatgga 
      ggcccaggt cgctctagt aacggagtt gcaagactt 
      tttccggcg cagaggtga actagaact cgactattc 
      gaaaaattt agataaact agcgaaaag cttgcagct 
      tcggcacaa ggaacaaaa acaaaaacg agaacaatg 
      gcctttatt ttcgagtta tacgtgttg gcaacaatt 
      agtaacgca gactaaaaa tctaagcag ggatcatgt 
      agctttatc cgaagttta ctccacgca tttggtctc 
      caggctgtc gcaggtcat ggaggacgt ccagaggat 
      ctacaagag gtgccggga aatcggata cgagactca 
      cgaggagat actacgtgt cttgcacga gcttcacac 
      aacaatgaa aacatatca cagttatca ggcggaact 
      gcgccaagc ggaggccaa gctaaaatc agccgaaac 
      ccaaagagc gaaattaga gcagtccct gtcccagga 
      caagttaga taggtcgaa aaagtacaa gctgatgga 
      gaaggaagt gatgaagcg caaaaacaa atacacgga 
      tgcgaaatt gaaagctct caaagcccg gaacgagta 
      tattttatg tttagaggc ttccaacac cacaatcca 
      caaatactt cgtcgacga tttatccga tctcattga 
      ttgcatgga tttcggttt ccacaactg catatcccg 
      ggcgcttct gatgcacgt aacggcgga ggagggccg 
      ccagaggtc ggtccagaa cggcttaga caccctatc 
      agcgtgcat taattccct agactcgag attagacaa 
      acagcggtt ccttgagta caaccacac ggcgttcat 
      gattccgaa aaaactcga attccaagg acagaagca 
      ggaagagcc cgctgaacc agaaatcca aaaagtcct 
      gcaccagga gatggagag ccgattacg ccagctgca 
      gcaaagggt gacctcgct caggaccga gtcggagga 
      ggtctggaa gacgctgga aaccgccga atccaccct 
      gctggagat gctcaacgc gaaagacta cgactgtag 
      cgcctattt tggcgaaaa cgcggtgcc agccagcaa 
      accgcccga aaccgtctc catcaagct acgggcgga 
      ccggcagga gaccgaaga gttctatct aacgaaatt 
      ccgagagta tttattggg atcaacaaa aatcgctcg 
      cctagacgc taagcaaga gtacataag acaatcgct 
      gctgtccga agcgcccga ctattgtag cacccttaa 
      accagtcgt caagactcc ccgccggaa acgaatcgg 
      tcggctgca aatgagtgg ccagccgaa gttgtttgg 
      cgggtcctt agaggagta tttggaggc cacgaatca 
      agacattcc tctcattat gaagtcttg cattagggt 
      tattaattt atacggtct acaccacca gggtatttt 
      ccgggtgtc ggggtccca agtcgagat aaataactt 
      cagggagtg gttcgaacg gggcgaaga tccgctcgc 
      tgatatgac ggacgcgtc tgatatcaa cagcgtggc 
      gggggtttt gaaactgta tctgcggga actgcgcga 
      gccgctctt cccgatcat ttatttcga acaattcat 
      ggagcttgc acaattaga gtctaagcg ggaattcat 
      tgttaggat gaaggagct tatcaatag tttaccaag 
      aactgtgat agttgtgat gcggtacct cttcgcctt 
      ccttaacca cttgtcgga gttttccga cgagaacat 
      gatggatcc ttacaacct agccatttg ttttgggcc 
      gacgctagt gccggttcc cgacgacaa ggaccaagt 
      tcagtacca gaaccaagt taacgaact cattaagaa 
      tattattat gtttaacga ggaaatttt ccccaacga 
      cggtggcac ggtctatga gaagtatat atccccgga 
      accggatga ccacgacgt tggggatct gccatctga 
      ccaggtgcc agaagacct ggactccga agtataccc 
      atctgaaga tgattctga aaacatgga agcgacggc 
      gcagttcga cttcatcgc aaggtctga ccgagaact 
      gtcgctgaa gaaaggcga caccgtgac gttgtattc 
      ccaagtgtc gaacgactg gtggaaggg gtcggttaa 
      ggggcagga agggttgat tccagacaa atatatatc 
      tctaaaaat gaaagatga tgatcgaga gaagctgga 
      aaacctgaa atcgagctc gtctgagga gtcgatgcg 
      gcggagagt ctccagttc gaacgactc gatgttgtc 
      cgagagctc cgtctctgc gagcaattc gcccctagt 
      gcagtgcgc cccagtgac atggactaa cgtgtcaga 
      catgaacga atcaatctc atccgaaaa caactcagt 
      aattttaaa ccagacgag agagaacgg acacaaccg 
      ccttaaatc cctggacat atctctaga atcccactt 
      attgaatcg tatgcgcga tcccgtcgt caccataaa 
      cgtgaacca aaccccgca aaatatcac aataaacgg 
      ttcccctgt catgcaatc ccgcaaatt agagaagag 
      cgaaacggt tcccgaaat cggaaaatc ggagaccga 
      catcgaact gcgccacaa gtcggaaat cgacgaatc 
      gaacctaaa tttcagcca aaaccgcga gcagtggca 
      gcgccgggc ggtctccca gtcgcacat ccccctgtc 
      ccagcccca gaccctgaa ggcgaaccg gaactccga 
      gtcctacct gcagcggca gaaccacac tccggacct 
      ggtcatgga cctccccct ggtcggcaa ctcgagtcc 
      gaaggaaac cacgaagaa gtccatgtc cgtgtcggg 
      taacttgac ctctgaggg gccgctggg cgacgagag 
      ccacaagtc gcccgagag ccccgacat gcagacggc 
      ggccgaacg gttcgccaa gcagaacca atgcacgct 
      caagaagaa caccaaagt tcacgttga cagcagcga 
      cagtgctga gacgaatct gatcacgat cactagtcc 
      catgcccga gcgcaagta tgcgacgat cgggagcgc 
      gaccacgac gttcaagcc ccagctcaa agcgaaacc 
      tccagtgct caagaaacc cgcgttttc ggtgcccat 
      ggcggcagt ctcaagcga agtacgaaa agaccaacc 
      ggatcttcc cacgtaatt ctatgcaac tcagttgtc 
      gaagacaat aatggtata ctgatagag gttggagcc 
      gctatttta tatagaaat gttttttgt aacgtggac 
      atatttgtg tttcaacca ttgcattca atgtggtgc 
      ttatgtgta tgaattgta cccagaccc aggcgcatt 
      ggtttcact tgtccgttt taacagttt gtgttgtgt 
      tatttgata ttgttaact gtattctac gttaagagg 
      acgattttt ttaatgaga ctgataacg atatttaac 
      ggtttagat ttaacttag aaaaataat caaaaagta 
      cttagacag ggtgtgtgt aaaagattg ttttatata 
      ggtatatat tttttgtta gactgatcc aaacatata 
      catttacat atatccatg tgatgtagc atacgtaca 
      tatttatac aatgtcaag ttgtaatgg actcgtgaa 
      tttattaat cacaccaat ctatgaatt gtattaatc 
      ggtgcctac ctagatata aaatgattt gtttatgat 
      cttatcatt tacatcgaa ttgtctatt ttacatgtt 
      ttatattaa gtacggata ttgtgtatt cttttaagt 
      ccttgcctt atattagca aagagtgaa aattagaat 
      aagttaacg ccattcacc aactcatca aattatttt 
      aacgtgtaa tactccgca aacacttat ccacggaaa 
      cccgtttgc tgagtgctg tggctctta atattatta 
      aatgtaaaa aatatataa tctccaaat at
    • >TC013589 RB
      agaattcgt caaaaaaac gcaaaatct actagtctg 
      tgttgcgat gctacatcg caactcgac ttactctat 
      ctactacct tgcctacag cagaaagtg tagattcgg 
      ggcgagcgc cgatgtagt agttagttg gtggatttt 
      tatttatag aacccacgt gcagccggc tcgatgtgt 
      tttatttat actgtgttt cggtttttt tctactaat 
      ttacctcct tccgttgtt tccattcga taaatgcca 
      gctcaaata agactgatt ttcgtgtga gtgcgcaac 
      acgcagcat ccccaacga tgttccagt gcatcatcc 
      aacaaaaga atggctgga ttcaccccc ataacactg 
      agaccaaag acgttttcc cagatatcc gtttgcaac 
      tcaacgagc agttgcgat gtctagata tgcgaatgg 
      aggcccagg tcgctctag taacggagt tgcaagact 
      ttttccggc gcagaggtg aactagaac tcgactatt 
      cgaaaaatt tagataaac tagcgaaaa gcttgcagc 
      ttcggcaca aggaacaaa aacaaaaac gagaacaat 
      ggcctttat tttcgagtt atacgtgtt ggcaacaat 
      tagtaacgc agactaaaa atctaagca gggatcatg 
      tagctttat ccgaagttt actccacgc atttggtct 
      ccaggctgt cgcaggtca tggaggacg tccagagga 
      tctacaaga ggtgccggg aaatcggat acgagactc 
      acgaggaga tactacgtg tcttgcacg agcttcaca 
      caacaatga aaacatatc acagttatc aggcggaac 
      tgcgccaag cggaggcca agctaaaat cagccgaaa 
      cccaaagag cgaaattag agcagtccc tgtcccagg 
      acaagttag ataggtcga aaaagtaca agctgatgg 
      agaaggaag tgatgaagc gcaaaaaca aatacacgg 
      atgcgaaat tgaaagctc tcaaagccc ggaacgagt 
      atattttat gtttagagg cttccaaca ccacaatcc 
      acaaatact tcgtcgacg atttatccg atctcattg 
      attgcatgg atttcggtt tccacaact gcatatccc 
      gggcgcttc tgatgcacg taacggcgg aggagggcc 
      gccagaggt cggtccaga acggcttag acaccctat 
      cagcgtgca ttaattccc tagactcga gattagaca 
      aacagcggt tccttgagt acaaccaca cggcgttca 
      tgattccga aaaaactcg aattccaag gacagaagc 
      aggaagagc ccgctgaac cagaaatcc aaaaagtcc 
      tgcaccagg agatggaga gccgattac gccagctgc 
      agcaaaggg tgacctcgc tcaggaccg agtcggagg 
      aggtctgga agacgctgg aaaccgccg aatccaccc 
      tgctggaga tgctcaacg cgaaagact acgactgta 
      gcgcctatt ttggcgaaa acgcggtgc cagccagca 
      aaccgcccg aaaccgtct ccatcaagc tacgggcgg 
      accggcagg agaccgaag agttctatc taacgaaat 
      tccgagagt atttattgg gatcaacaa aaatcgctc 
      gcctagacg ctaagcaag agtacataa gacaatcgc 
      tgctgtccg aagcgcccg actattgta gcaccctta 
      aaccagtcg tcaagactc cccgccgga aacgaatcg 
      gtcggctgc aaatgagtg gccagccga agttgtttg 
      gcgggtcct tagaggagt atttggagg ccacgaatc 
      aagacattc ctctcatta tgaagtctt gcattaggg 
      ttattaatt tatacggtc tacaccacc agggtattt 
      tccgggtgt cggggtccc aagtcgaga taaataact 
      tcagggagt ggttcgaac ggggcgaag atccgctcg 
      ctgatatga cggacgcgt ctgatatca acagcgtgg 
      cgggggttt tgaaactgt atctgcggg aactgcgcg 
      agccgctct tcccgatca tttatttcg aacaattca 
      tggagcttg cacaattag agtctaagc gggaattca 
      ttgttagga tgaaggagc ttatcaata gtttaccaa 
      gaactgtga tagttgtga tgcggtacc tcttcgcct 
      tccttaacc acttgtcgg agttttccg acgagaaca 
      tgatggatc cttacaacc tagccattt gttttgggc 
      cgacgctag tgccggttc ccgacgaca aggaccaag 
      ttcagtacc agaaccaag ttaacgaac tcattaaga 
      atattatta tgtttaacg aggaaattt tccccaacg 
      acggtggca cggtctatg agaagtata tatccccgg 
      aaccggatg accacgacg ttggggatc tgccatctg 
      accaggtgc cagaagacc tggactccg aagtatacc 
      catctgaag atgattctg aaaacatgg aagcgacgg 
      cgcagttcg acttcatcg caaggtctg accgagaac 
      tgtcgctga agaaaggcg acaccgtga cgttgtatt 
      cccaagtgt cgaacgact ggtggaagg ggtcggtta 
      aggggcagg aagggttga ttccagaca aatatatat 
      ctctaaaaa tgaaagatg atgatcgag agaagctgg 
      aaaacctga aatcgagct cgtctgagg agtcgatgc 
      ggcggagag tctccagtt cgaacgact cgatgttgt 
      ccgagagct ccgtctctg cgagcaatt cgcccctag 
      tgcagtgcg ccccagtga catggacta acgtgtcag 
      acatgaacg aatcaatct catccgaaa acaactcag 
      taattttaa accagacga gagagaacg gacacaacc 
      gccttaaat ccctggaca tatctctag aatcccact 
      tattgaatc gtatgcgcg atcccgtcg tcaccataa 
      acgtgaacc aaaccccgc aaaatatca caataaacg 
      gttcccctg tcatgcaat cccgcaaat tagagaaga 
      gcgaaacgg ttcccgaaa tcggaaaat cggagaccg 
      acatcgaac tgcgccaca agtcggaaa tcgacgaat 
      cgaacctaa atttcagcc aaaaccgcg agcagtggc 
      agcgccggg cggtctccc agtcgcaca tccccctgt 
      cccagcccc agaccctga aggcgaacc ggaactccg 
      agtcctacc tgcagcggc agaaccaca ctccggacc 
      tggtcatgg acctccccc tggtcggca actcgagtc 
      cgaaggaaa ccacgaaga agtccatgt ccgtgtcgg 
      gtaacttga cctctgagg ggccgctgg gcgacgaga 
      gccacaagt cgcccgaga gccccgaca tgcagacgg 
      cggccgaac ggttcgcca agcagaacc aatgcacgc 
      tcaagaaga acaccaaag ttcacgttg acagcagcg 
      acagtgctg agacgaatc tgatcacga tcactagtc 
      ccatgcccg agcgcaagt atgcgacga tcgggagcg 
      cgaccacga cgttcaagc cccagctca aagcgaaac 
      ctccagtgc tcaagaaac ccgcgtttt cggtgccca 
      tggcggcag tctcaagcg aagtacgaa aagaccaac 
      cggatcttc ccacgtaat tctatgcaa ctcagttgt 
      cgaagacaa taatggtat actgataga ggttggagc 
      cgctatttt atatagaaa tgttttttg taacgtgga 
      catatttgt gtttcaacc attgcattc aatgtggtg 
      cttatgtgt atgaattgt acccagacc caggcgcat 
      tggtttcac ttgtccgtt ttaacagtt tgtgttgtg 
      ttatttgat attgttaac tgtattcta cgttaagag 
      gacgatttt tttaatgag actgataac gatatttaa 
      cggtttaga tttaactta gaaaaataa tcaaaaagt 
      acttagaca gggtgtgtg taaaagatt gttttatat 
      aggtatata ttttttgtt agactgatc caaacatat 
      acatttaca tatatccat gtgatgtag catacgtac 
      atatttata caatgtcaa gttgtaatg gactcgtga 
      atttattaa tcacaccaa tctatgaat tgtattaat 
      cggtgccta cctagatat aaaatgatt tgtttatga 
      tcttatcat ttacatcga attgtctat tttacatgt 
      tttatatta agtacggat attgtgtat tcttttaag 
      tccttgcct tatattagc aaagagtga aaattagaa 
      taagttaac gccattcac caactcatc aaattattt 
      taacgtgta atactccgc aaacactta tccacggaa 
      acccgtttg ctgagtgct gtggctctt aatattatt 
      aaatgtaaa aaatatata atctccaaa tat
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY