Status
Please wait ...
Gene information
General information
TC034342
Former TC numbers

If one gene is splitted or genes are merged, the original TC numbers are listed. One listed former TC number indicates the previous gene has be splitted, serveral former TC number represents a merged gene.

TC012464,TC012463
Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007424.3: 8435521..8469455
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC034342
    iBeetle screen iB_05246

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 30.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 1 (3 dpi)
    Days post injection


    adult lethality - Number of animals showing the phenotype: 2 (9 dpi)
    Days post injection


    Fertility
    egg chamber mostly not present - Number of animals showing the phenotype: 4

    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 20.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 100.0% (includes death as larva, prepupa, pupa, adult)

    pupal molt not fulfilled (died with pupal and larval features) - Number of animals showing the phenotype: 7 (11 dpi)
    Days post injection


    Comment: The animals show an incomplete pupal molt in a phenotypic series, ranging from larvae with wing anlagen to nearly wildtypic pupae. Legs and antennae show intermediate phenotypes (shortened; partially larval, partially pupal like), wings are variably well developed and genital palps are only present in the most pupal-like animals.

    eclosion not fulfilled (died as pupa) - Number of animals showing the phenotype: 1 (11 dpi)
    Days post injection


    pupal molt not fulfilled (died with pupal and larval features) - Number of animals showing the phenotype: 5 (16 dpi)
    Days post injection


    eclosion not fulfilled (died as pupa) - Number of animals showing the phenotype: 1 (16 dpi)
    Days post injection


    Pupal morphology
    antenna shortened - Number of animals showing the phenotype: 2
    antenna irregular - Number of animals showing the phenotype: 7
    wings irregular - Number of animals showing the phenotype: 8
    legs irregular - Number of animals showing the phenotype: 8
    wings ectopicallypresent - Number of animals showing the phenotype: 4
    female genital lobes not present - Number of animals showing the phenotype: 7
    abdomen dorsal spotted - Number of animals showing the phenotype: 2

    Comment: dark spots are located at/associated with the dorsal vessel, because they move following the contractions of the heart
    abdomen dorsal potentiallynecrotic - Number of animals showing the phenotype: 2
    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC034342 RA
      MDKKHGSHC RKNFDAVSG LERIAEELM GRRKWKLYQ 
      ESISRSYLQ PLNNNVKTQ DRHDQKDTA TSSPKNDAD 
      GADAATEPK EKENEKSSQ EVEDRLKDW TPQTKCYFC 
      VDGKLDSEH TAHGVLSPR HSDSDSSDS HSDNEVPPS 
      LTPSGSLLN NNHHRHRQP VAPANMTTI ESVTSMAAL 
      AAAFSGGNS PGTTAPHLP FYAPSIISH NWYLANVAR 
      SFQADRLGD NQDKAASGE QPLDLSKGA ASAATEGKT 
      PNNNVRLPT LDTKHIFNS DFRAKPRMS AVAGRRTYT 
      EDELQAALR DIQSGKLGT RRAAVIYGI PRSTLRNKV 
      YKLALERER ESHLNSTTP LKLDEEEVM EDDKELSGA 
      EEEKEVEKA LQAPLCDIL RFSNVEIPP EALKALLQK 
      NKEGQEPWA GMEHSEVGP YIQNLLLAS QNLLSNQKP 
      LENSVLNSV VPEFVKRLI TDETKNNGD TVSRPSPSN 
      SAAPKPKSE SDMETEESP SNVILKIPS FKPTSSKNG 
      CDLFRGSET GSMVSPPVT SESGSPPIL PGKGMTIKD 
      VKDVIAQSI SQKFQQTLE PRRPSISEM DYKRGGFTP 
      PLASGISVM KTQDLTRPY QPPPKPQQS PAPATGGKG 
      TRPKRGKYR NYDRDSLVE AVRAVQRGE MSVHRAGSY 
      YGVPHSTLE YKVKERHLM RPRKRDPKP NPVDEKIAS 
      LKQNDIRAQ EKLKPMMKP PQKFPPTAT SPNGIKLPI 
      FEPGMAPLA GYNPPPFPF WPHPGFHHI PLEYGRPIP 
      PNPEFFASQ MMQKLQEES SRTGITGQG TTPPNAPAL 
      AKSARQIAE SLLDGTGSN GSFLDGIIR SSLESGVPT 
      NEEKLSKED KNVAVENLS NKALLDQLC RNSRLTPLS 
      KPSMTSETN SSGDESYRK GASPLNFTA GASNSKEGD 
      TSPGELPTI ELSNDSNES TDKRPMITS PESATTTTT 
      STTTATSTP PARIYLKKD LANPDNLQP EMLMRFRDV 
      LPDLERNGV GEGLVTGSA SDNDAPQD
    • >TC034342 RB
      MDKKHGSHC RKNFDAVSG LERIAEELM GRRKWKLYQ 
      ESISRSYLQ PLNNNVKTQ DRHDQKDTA TSSPKNDAD 
      GADAATEPK EKENEKSSQ EVEDRLKDW TPQTKCYFC 
      VDGKLDSEH TAHGVLSPR HSDSDSSDS HSDNEVPPS 
      LTPSGSLLN NNHHRHRQP VAPANMTTI ESVTSMAAL 
      AAAFSGGNS PGTTAPHLP FYAPSIISH NWYLANVAR 
      SFQADRLGD NQDKAASGE QPLDLSKGA ASAATEGKT 
      PNNNVRLPT LDTKHIFKA KPRMSAVAG RRTYTEDEL 
      QAALRDIQS GKLGTRRAA VIYGIPRST LRNKVYKLA 
      LERERESHL NSTTPLKLD EEEVMEDDK ELSGAEEEK 
      EVEKALQAP LCDILRFSN VEIPPEALK ALLQKNKEG 
      QEPWAGMEH SEVGPYIQN LLLASQNLL SNQKPLENS 
      VLNSVVPEF VKRLITDET KNNGDTVSR PSPSNSAAP 
      KPKSESDME TEESPSNVI LKIPSFKPT SSKNGCDLF 
      RGSETGSMV SPPVTSESG SPPILPGKG MTIKDVKDV 
      IAQSISQKF QQTLEPRRP SISEMDYKR GGFTPPLAS 
      GISVMKTQD LTRPYQPPP KPQQSPAPA TGGKGTRPK 
      RGKYRNYDR DSLVEAVRA VQRGEMSVH RAGSYYGVP 
      HSTLEYKVK ERHLMRPRK RDPKPNPVD EKIASLKQN 
      DIRAQEKLK PMMKPPQKF PPTATSPNG IKLPIFEPG 
      MAPLAGYNP PPFPFWPHP GFHHIPLEY GRPIPPNPE 
      FFASQMMQK LQEESSRTG ITGQGTTPP NAPALAKSA 
      RQIAESLLD GTGSNGSFL DGIIRSSLE SGVPTNEEK 
      LSKEDKNVA VENLSNKAL LDQLCRNSR LTPLSKPSM 
      TSETNSSGD ESYRKGASP LNFTAGASN SKEGDTSPG 
      ELPTIELSN DSNESTDKR PMITSPESA TTTTTSTTT 
      ATSTPPARI YLKKDLANP DNLQPEMLM RFRDVLPDL 
      ERNGVGEGL VTGSASDND APQD
    CDS sequence
    • >TC034342 RA
      atggacaag aaacatggt tcacattgt cgcaaaaat 
      ttcgacgcc gtttcaggg ttggaacga atcgctgaa 
      gagttgatg ggtcggagg aaatggaaa ctgtaccaa 
      gagtccata tcgaggagt tatttgcaa ccgttgaac 
      aacaacgtc aagacccaa gatcgccac gaccaaaaa 
      gacaccgcc acctcatcg ccgaaaaac gacgccgac 
      ggcgccgac gccgccacg gaacccaag gaaaaagaa 
      aacgaaaag agctcgcaa gaagttgag gacaggctc 
      aaggactgg acgccgcag acgaagtgc tacttctgc 
      gtcgacggc aagctggat agtgaacac acggcacac 
      ggggttctg agtccccgc cattcggac tcggattcg 
      tctgacagc cacagtgac aacgaggtc ccgccatcg 
      ctcactccc tccgggagc ttgctcaac aataaccac 
      caccgccac cggcagccg gtggcaccg gccaacatg 
      acgacgatc gagagcgtc acgtcgatg gcggcgttg 
      gcggcggcc ttctccggc gggaactcg ccgggaacg 
      accgccccc cacttgccc ttctacgcc ccgagcatc 
      atctcccac aactggtat ctcgccaac gtggcgagg 
      tccttccag gcggacagg ctcggagac aaccaggac 
      aaggcggct tccggggag cagccgctg gatctcagc 
      aagggggcg gcgagcgcc gccaccgaa ggcaaaacg 
      cccaacaac aacgtccgg ttgcccacc ctcgacacc 
      aagcacata ttcaattct gattttaga gcgaaacct 
      aggatgtca gctgtagcc ggtaggagg acgtacacc 
      gaagacgaa ctccaagca gcgttgaga gacatccag 
      tcgggcaaa ttggggacg agaagggcg gccgtcatc 
      tacggcata cccaggtcg acgttacga aacaaagtc 
      tacaaactt gccttagaa agggagcga gagtcgcat 
      ttgaacagt acgacgccg ctcaagctc gacgaagaa 
      gaggtgatg gaggacgac aaggaattg tccggcgct 
      gaagaggag aaggaagtg gagaaggcg ctccaagct 
      cctctttgt gatatcttg aggttctcg aacgtggag 
      atacctccg gaggcgctc aaagccctc ctccagaag 
      aataaggaa ggacaagaa ccgtgggcc ggcatggag 
      cacagcgag gtcggacct tacatccaa aacctcctc 
      ctagcctcc cagaacctc ctcagcaac cagaaacct 
      ctcgaaaac tcggttcta aacagtgtc gtgccagaa 
      ttcgtaaaa cggctgata acggacgaa acaaaaaat 
      aacggtgat acagtgtca aggccgagt ccgtcgaat 
      tcggcagca cccaaaccc aaatccgaa tcggacatg 
      gaaacggag gagtcgcct tcgaatgtg atactaaaa 
      attccgtcc tttaaaccg acgtcgagc aagaacgga 
      tgtgattta ttcagaggt tccgaaacc ggaagcatg 
      gtctcaccc ccggtcacg agcgagtcg ggctcgccc 
      ccgatcctc cccggcaaa ggcatgacg atcaaagac 
      gtcaaggac gtcatcgct caaagcatc agccagaag 
      ttccagcag accttggag cctcgacgg ccttccatc 
      tccgagatg gactacaag cggggcggt ttcacgccg 
      ccgctcgcc tccggcatc tccgtcatg aagacccaa 
      gacctcacc cggccctac cagccgccc cccaagccc 
      cagcagagc cccgcgccc gccaccggc ggcaagggc 
      acgcgcccc aagcggggc aagtaccgc aactacgac 
      cgcgacagc ctcgtggag gcggtccgg gcggtgcaa 
      aggggcgag atgtcggtg caccgcgcc ggcagctac 
      tacggcgtg ccccactcg accctcgag tacaaagtc 
      aaggagagg cacctcatg cggccgcgg aagcgcgac 
      cccaagccc aaccccgtc gacgagaaa atcgccagc 
      ctcaagcag aacgacatc cgagcccag gagaagctc 
      aaaccgatg atgaaaccc ccgcagaag ttccctccg 
      acggcgacg tcgcccaac ggcatcaaa ctcccgatt 
      ttcgagccg gggatggcg ccgctcgcc ggctacaac 
      cctcctccc ttccccttc tggccgcat cctggcttc 
      caccacatc ccgttggag tacggccga cccatacct 
      cccaacccg gagttcttc gcctcgcag atgatgcaa 
      aagctgcag gaggagtcc tccaggacc ggaatcacc 
      ggacagggc accacgccg cccaatgcc ccggcgttg 
      gccaaaagc gcaaggcaa attgccgag tcactgctc 
      gatgggacg ggctccaac gggtccttc ttggacggc 
      atcatcagg tccagtctg gagtcggga gtgcccacc 
      aacgaggag aaattatcc aaagaagac aaaaacgtc 
      gccgttgaa aacctctcc aataaagca cttttagac 
      caactgtgc aggaacagc agactgacg ccactttcg 
      aagccttcg atgacttca gaaaccaac agctcggga 
      gatgagtcc tacaggaag ggcgccagt cctctcaac 
      ttcacggct ggagcttcg aactcgaaa gagggcgac 
      acctccccc ggcgagctg cccacaatc gaactgtcg 
      aacgattcg aacgaatca acggataaa agaccgatg 
      ataacgtcg ccggaatcg gcgacgacg actacgaca 
      tcaacaaca acagcaaca agcacacca ccggctagg 
      atttatcta aagaaagat ctggcgaat ccagacaac 
      cttcagccg gagatgctg atgcgcttc cgggacgtc 
      cttcccgac ttggagcgt aacggcgtc ggcgaaggc 
      ctcgtaaca ggaagtgcc tcagataat gacgcgcct 
      caagactga
    • >TC034342 RB
      atggacaag aaacatggt tcacattgt cgcaaaaat 
      ttcgacgcc gtttcaggg ttggaacga atcgctgaa 
      gagttgatg ggtcggagg aaatggaaa ctgtaccaa 
      gagtccata tcgaggagt tatttgcaa ccgttgaac 
      aacaacgtc aagacccaa gatcgccac gaccaaaaa 
      gacaccgcc acctcatcg ccgaaaaac gacgccgac 
      ggcgccgac gccgccacg gaacccaag gaaaaagaa 
      aacgaaaag agctcgcaa gaagttgag gacaggctc 
      aaggactgg acgccgcag acgaagtgc tacttctgc 
      gtcgacggc aagctggat agtgaacac acggcacac 
      ggggttctg agtccccgc cattcggac tcggattcg 
      tctgacagc cacagtgac aacgaggtc ccgccatcg 
      ctcactccc tccgggagc ttgctcaac aataaccac 
      caccgccac cggcagccg gtggcaccg gccaacatg 
      acgacgatc gagagcgtc acgtcgatg gcggcgttg 
      gcggcggcc ttctccggc gggaactcg ccgggaacg 
      accgccccc cacttgccc ttctacgcc ccgagcatc 
      atctcccac aactggtat ctcgccaac gtggcgagg 
      tccttccag gcggacagg ctcggagac aaccaggac 
      aaggcggct tccggggag cagccgctg gatctcagc 
      aagggggcg gcgagcgcc gccaccgaa ggcaaaacg 
      cccaacaac aacgtccgg ttgcccacc ctcgacacc 
      aagcacata ttcaaagcg aaacctagg atgtcagct 
      gtagccggt aggaggacg tacaccgaa gacgaactc 
      caagcagcg ttgagagac atccagtcg ggcaaattg 
      gggacgaga agggcggcc gtcatctac ggcataccc 
      aggtcgacg ttacgaaac aaagtctac aaacttgcc 
      ttagaaagg gagcgagag tcgcatttg aacagtacg 
      acgccgctc aagctcgac gaagaagag gtgatggag 
      gacgacaag gaattgtcc ggcgctgaa gaggagaag 
      gaagtggag aaggcgctc caagctcct ctttgtgat 
      atcttgagg ttctcgaac gtggagata cctccggag 
      gcgctcaaa gccctcctc cagaagaat aaggaagga 
      caagaaccg tgggccggc atggagcac agcgaggtc 
      ggaccttac atccaaaac ctcctccta gcctcccag 
      aacctcctc agcaaccag aaacctctc gaaaactcg 
      gttctaaac agtgtcgtg ccagaattc gtaaaacgg 
      ctgataacg gacgaaaca aaaaataac ggtgataca 
      gtgtcaagg ccgagtccg tcgaattcg gcagcaccc 
      aaacccaaa tccgaatcg gacatggaa acggaggag 
      tcgccttcg aatgtgata ctaaaaatt ccgtccttt 
      aaaccgacg tcgagcaag aacggatgt gatttattc 
      agaggttcc gaaaccgga agcatggtc tcacccccg 
      gtcacgagc gagtcgggc tcgcccccg atcctcccc 
      ggcaaaggc atgacgatc aaagacgtc aaggacgtc 
      atcgctcaa agcatcagc cagaagttc cagcagacc 
      ttggagcct cgacggcct tccatctcc gagatggac 
      tacaagcgg ggcggtttc acgccgccg ctcgcctcc 
      ggcatctcc gtcatgaag acccaagac ctcacccgg 
      ccctaccag ccgcccccc aagccccag cagagcccc 
      gcgcccgcc accggcggc aagggcacg cgccccaag 
      cggggcaag taccgcaac tacgaccgc gacagcctc 
      gtggaggcg gtccgggcg gtgcaaagg ggcgagatg 
      tcggtgcac cgcgccggc agctactac ggcgtgccc 
      cactcgacc ctcgagtac aaagtcaag gagaggcac 
      ctcatgcgg ccgcggaag cgcgacccc aagcccaac 
      cccgtcgac gagaaaatc gccagcctc aagcagaac 
      gacatccga gcccaggag aagctcaaa ccgatgatg 
      aaacccccg cagaagttc cctccgacg gcgacgtcg 
      cccaacggc atcaaactc ccgattttc gagccgggg 
      atggcgccg ctcgccggc tacaaccct cctcccttc 
      cccttctgg ccgcatcct ggcttccac cacatcccg 
      ttggagtac ggccgaccc atacctccc aacccggag 
      ttcttcgcc tcgcagatg atgcaaaag ctgcaggag 
      gagtcctcc aggaccgga atcaccgga cagggcacc 
      acgccgccc aatgccccg gcgttggcc aaaagcgca 
      aggcaaatt gccgagtca ctgctcgat gggacgggc 
      tccaacggg tccttcttg gacggcatc atcaggtcc 
      agtctggag tcgggagtg cccaccaac gaggagaaa 
      ttatccaaa gaagacaaa aacgtcgcc gttgaaaac 
      ctctccaat aaagcactt ttagaccaa ctgtgcagg 
      aacagcaga ctgacgcca ctttcgaag ccttcgatg 
      acttcagaa accaacagc tcgggagat gagtcctac 
      aggaagggc gccagtcct ctcaacttc acggctgga 
      gcttcgaac tcgaaagag ggcgacacc tcccccggc 
      gagctgccc acaatcgaa ctgtcgaac gattcgaac 
      gaatcaacg gataaaaga ccgatgata acgtcgccg 
      gaatcggcg acgacgact acgacatca acaacaaca 
      gcaacaagc acaccaccg gctaggatt tatctaaag 
      aaagatctg gcgaatcca gacaacctt cagccggag 
      atgctgatg cgcttccgg gacgtcctt cccgacttg 
      gagcgtaac ggcgtcggc gaaggcctc gtaacagga 
      agtgcctca gataatgac gcgcctcaa gactga
    mRNA sequence
    • >TC034342 RA
      tagtgatac agaccacca ttcatgcaa cacattact 
      gcaaatttt cagaagaaa tggaaacgc gccaaccgc 
      gtcgcactt caaacatgt aacgaaaaa tattaggcg 
      gctatggcg aaaaaaacg gagcacgac ggccagaaa 
      tgaagattt ccacaggcg gcgtggagg cagtgaaac 
      aaaaactgt gcaacagtg actctgatg tttgaattt 
      tccgggcgt tttgacaag tgggggtgt gtgtgcgcc 
      actgacttt taaattatt ttttttcgc tgttggagg 
      tgcgttcgg cgacttatc taataaaat tttggtgta 
      atgaatgat ttgaagcaa tgggtaata gaaaatctt 
      gtatacgaa tcagtgtag caaacttgc cgctcggga 
      aaaatggcg gagtgctct tatgcgcga tgcgttcaa 
      cagaggaga aatattaga agagaactt caaagatgg 
      acaagaaac atggttcac attgtcgca aaaatttcg 
      acgccgttt cagggttgg aacgaatcg ctgaagagt 
      tgatgggtc ggaggaaat ggaaactgt accaagagt 
      ccatatcga ggagttatt tgcaaccgt tgaacaaca 
      acgtcaaga cccaagatc gccacgacc aaaaagaca 
      ccgccacct catcgccga aaaacgacg ccgacggcg 
      ccgacgccg ccacggaac ccaaggaaa aagaaaacg 
      aaaagagct cgcaagaag ttgaggaca ggctcaagg 
      actggacgc cgcagacga agtgctact tctgcgtcg 
      acggcaagc tggatagtg aacacacgg cacacgggg 
      ttctgagtc cccgccatt cggactcgg attcgtctg 
      acagccaca gtgacaacg aggtcccgc catcgctca 
      ctccctccg ggagcttgc tcaacaata accaccacc 
      gccaccggc agccggtgg caccggcca acatgacga 
      cgatcgaga gcgtcacgt cgatggcgg cgttggcgg 
      cggccttct ccggcggga actcgccgg gaacgaccg 
      ccccccact tgcccttct acgccccga gcatcatct 
      cccacaact ggtatctcg ccaacgtgg cgaggtcct 
      tccaggcgg acaggctcg gagacaacc aggacaagg 
      cggcttccg gggagcagc cgctggatc tcagcaagg 
      gggcggcga gcgccgcca ccgaaggca aaacgccca 
      acaacaacg tccggttgc ccaccctcg acaccaagc 
      acatattca attctgatt ttagagcga aacctagga 
      tgtcagctg tagccggta ggaggacgt acaccgaag 
      acgaactcc aagcagcgt tgagagaca tccagtcgg 
      gcaaattgg ggacgagaa gggcggccg tcatctacg 
      gcataccca ggtcgacgt tacgaaaca aagtctaca 
      aacttgcct tagaaaggg agcgagagt cgcatttga 
      acagtacga cgccgctca agctcgacg aagaagagg 
      tgatggagg acgacaagg aattgtccg gcgctgaag 
      aggagaagg aagtggaga aggcgctcc aagctcctc 
      tttgtgata tcttgaggt tctcgaacg tggagatac 
      ctccggagg cgctcaaag ccctcctcc agaagaata 
      aggaaggac aagaaccgt gggccggca tggagcaca 
      gcgaggtcg gaccttaca tccaaaacc tcctcctag 
      cctcccaga acctcctca gcaaccaga aacctctcg 
      aaaactcgg ttctaaaca gtgtcgtgc cagaattcg 
      taaaacggc tgataacgg acgaaacaa aaaataacg 
      gtgatacag tgtcaaggc cgagtccgt cgaattcgg 
      cagcaccca aacccaaat ccgaatcgg acatggaaa 
      cggaggagt cgccttcga atgtgatac taaaaattc 
      cgtccttta aaccgacgt cgagcaaga acggatgtg 
      atttattca gaggttccg aaaccggaa gcatggtct 
      cacccccgg tcacgagcg agtcgggct cgcccccga 
      tcctccccg gcaaaggca tgacgatca aagacgtca 
      aggacgtca tcgctcaaa gcatcagcc agaagttcc 
      agcagacct tggagcctc gacggcctt ccatctccg 
      agatggact acaagcggg gcggtttca cgccgccgc 
      tcgcctccg gcatctccg tcatgaaga cccaagacc 
      tcacccggc cctaccagc cgcccccca agccccagc 
      agagccccg cgcccgcca ccggcggca agggcacgc 
      gccccaagc ggggcaagt accgcaact acgaccgcg 
      acagcctcg tggaggcgg tccgggcgg tgcaaaggg 
      gcgagatgt cggtgcacc gcgccggca gctactacg 
      gcgtgcccc actcgaccc tcgagtaca aagtcaagg 
      agaggcacc tcatgcggc cgcggaagc gcgacccca 
      agcccaacc ccgtcgacg agaaaatcg ccagcctca 
      agcagaacg acatccgag cccaggaga agctcaaac 
      cgatgatga aacccccgc agaagttcc ctccgacgg 
      cgacgtcgc ccaacggca tcaaactcc cgattttcg 
      agccgggga tggcgccgc tcgccggct acaaccctc 
      ctcccttcc ccttctggc cgcatcctg gcttccacc 
      acatcccgt tggagtacg gccgaccca tacctccca 
      acccggagt tcttcgcct cgcagatga tgcaaaagc 
      tgcaggagg agtcctcca ggaccggaa tcaccggac 
      agggcacca cgccgccca atgccccgg cgttggcca 
      aaagcgcaa ggcaaattg ccgagtcac tgctcgatg 
      ggacgggct ccaacgggt ccttcttgg acggcatca 
      tcaggtcca gtctggagt cgggagtgc ccaccaacg 
      aggagaaat tatccaaag aagacaaaa acgtcgccg 
      ttgaaaacc tctccaata aagcacttt tagaccaac 
      tgtgcagga acagcagac tgacgccac tttcgaagc 
      cttcgatga cttcagaaa ccaacagct cgggagatg 
      agtcctaca ggaagggcg ccagtcctc tcaacttca 
      cggctggag cttcgaact cgaaagagg gcgacacct 
      cccccggcg agctgccca caatcgaac tgtcgaacg 
      attcgaacg aatcaacgg ataaaagac cgatgataa 
      cgtcgccgg aatcggcga cgacgacta cgacatcaa 
      caacaacag caacaagca caccaccgg ctaggattt 
      atctaaaga aagatctgg cgaatccag acaaccttc 
      agccggaga tgctgatgc gcttccggg acgtccttc 
      ccgacttgg agcgtaacg gcgtcggcg aaggcctcg 
      taacaggaa gtgcctcag ataatgacg cgcctcaag 
      actgacacc taactatcg taagtgaga gatttttat 
      acaaaacgt acacacaaa aagatgtgt gaaaatcaa 
      aatttcggt gtactatac acgatttac gcccccaat 
      ccccaggat aacgacgtg gttgtaaag tgaatattc 
      gagctcgat gacggtgtt tgttgatta tttatttta 
      tttttttgt cttaatgtt tttttagga tttagtggt 
      gagcatcaa agcagtgat ttgtatatt aggtgtttt 
      ttgactcaa aacaagatg tatttatta ctgggaaaa 
      attcatacc attccggct ggacggccg ggtatcaca 
      ccacgtgcc atcccacca ccatgtgat aaatgttga 
      attttttgc aggatgggg tgatactcg ctcgtttca 
      tgatacatg tttattgtt catgttcgg tgtttttgg 
      catgtacca aaaaaaatc gtatcatcg gtgtactct 
      ctatgtgtc ttcgacgtg gcgtattat acctcaaac 
      ttgtataaa gttcatgat gttcatgca ttcagctgc 
      tttgatgag gacggttca tatatatta tataatatc 
      gaaaaaccc atgggattg tcccagaat tgaaaaaaa 
      attatatct atctgtgat ttattcaaa atttttgat 
      gtatatttt ctctaaaaa tatcttaaa atattataa 
      ataattaaa aaattaaac aattaggga gtagtgatc 
      ggttggcga actgagtcg acccgcatt cagttaacc 
      gaaccgact ttcgtttaa ttcatatga caatgaagt 
      gcaattaga tggtatata cataatata tatttacat 
      caatattaa gtagtctat aagaatata taaaaagta 
      tattatata tttcaaagg aagctattt tgttcgaga 
      gataaaaga ttgactcaa ggtagagtt taaacgctt 
      cattccccc cttcttcaa caaccgtca gacatacaa 
      ccaaccact aaccaaacc gataccgac agttaaccg 
      aatcggcgc gtccgattc ctcaaacca aacagattt 
      ctacagtac acacatatt taagttgga ccaatgcag 
      ttgtatata atgtggtat gctttacat atcgtttgg 
      cgcccagag cgcgtctcc actccccga aggtggcgc 
      ccgagactc gacctagcc gccaaaacc aaacattcc 
      aaccatata tgtgccaga ttttttatt cgcgaaaat 
      tgaacaatt taaatgttt aaaaacaga ttgtgatct 
      cggcctcgg gccctttga tcatctcgg aatgcattt 
      tttgttttc gaagaagct gtgagcttc ccagttctc 
      gtagtccta aggttcaaa aacactgta attttaaat 
      gtttgtgtg tttcacttt tgcgcttgc caattacag 
      tttggggcg gggccgagg gcgcttttc acccaccga 
      ctcggctcc taccaaaaa tactcttcg gcttgattg 
      tagtgtatc aaaattccg taattccgc gcgattata 
      gtagaagga aaatttttc atatacaaa acaatattc 
      agcaagtgt gccaccgat ttttgtgca atttatata 
      gcatttctt gcatttctt atgtgataa tttgttacg 
      ataaagaca ctttctttg actacgttc gcttttttc 
      caaatgtgc ggtccaaaa acataaacc ttaaagtat 
      acgcgttga atacacgat atttttagt acgtaaatc 
      tcttacagg cttcaaaag cactatata atcaaaaga 
      ataaagttg ttgtcattt tttatcatt atttattgt 
      tgttttatt gagcgacac atcacgcaa agcgggaaa 
      ccttgacgg atttagcag cgccctctt ggcgccgcc 
      ttttctcag cgtgtttcg tgttttgcc agtgtgatc 
      cgggacttt acagattat ctgaaacgg tacatttga 
      ctattcgac agttcgttt tgataatcg attattatt 
      acg
    • >TC034342 RB
      tagtgatac agaccacca ttcatgcaa cacattact 
      gcaaatttt cagaagaaa tggaaacgc gccaaccgc 
      gtcgcactt caaacatgt aacgaaaaa tattaggcg 
      gctatggcg aaaaaaacg gagcacgac ggccagaaa 
      tgaagattt ccacaggcg gcgtggagg cagtgaaac 
      aaaaactgt gcaacagtg actctgatg tttgaattt 
      tccgggcgt tttgacaag tgggggtgt gtgtgcgcc 
      actgacttt taaattatt ttttttcgc tgttggagg 
      tgcgttcgg cgacttatc taataaaat tttggtgta 
      atgaatgat ttgaagcaa tgggtaata gaaaatctt 
      gtatacgaa tcagtgtag caaacttgc cgctcggga 
      aaaatggcg gagtgctct tatgcgcga tgcgttcaa 
      cagaggaga aatattaga agagaactt caaagatgg 
      acaagaaac atggttcac attgtcgca aaaatttcg 
      acgccgttt cagggttgg aacgaatcg ctgaagagt 
      tgatgggtc ggaggaaat ggaaactgt accaagagt 
      ccatatcga ggagttatt tgcaaccgt tgaacaaca 
      acgtcaaga cccaagatc gccacgacc aaaaagaca 
      ccgccacct catcgccga aaaacgacg ccgacggcg 
      ccgacgccg ccacggaac ccaaggaaa aagaaaacg 
      aaaagagct cgcaagaag ttgaggaca ggctcaagg 
      actggacgc cgcagacga agtgctact tctgcgtcg 
      acggcaagc tggatagtg aacacacgg cacacgggg 
      ttctgagtc cccgccatt cggactcgg attcgtctg 
      acagccaca gtgacaacg aggtcccgc catcgctca 
      ctccctccg ggagcttgc tcaacaata accaccacc 
      gccaccggc agccggtgg caccggcca acatgacga 
      cgatcgaga gcgtcacgt cgatggcgg cgttggcgg 
      cggccttct ccggcggga actcgccgg gaacgaccg 
      ccccccact tgcccttct acgccccga gcatcatct 
      cccacaact ggtatctcg ccaacgtgg cgaggtcct 
      tccaggcgg acaggctcg gagacaacc aggacaagg 
      cggcttccg gggagcagc cgctggatc tcagcaagg 
      gggcggcga gcgccgcca ccgaaggca aaacgccca 
      acaacaacg tccggttgc ccaccctcg acaccaagc 
      acatattca aagcgaaac ctaggatgt cagctgtag 
      ccggtagga ggacgtaca ccgaagacg aactccaag 
      cagcgttga gagacatcc agtcgggca aattgggga 
      cgagaaggg cggccgtca tctacggca tacccaggt 
      cgacgttac gaaacaaag tctacaaac ttgccttag 
      aaagggagc gagagtcgc atttgaaca gtacgacgc 
      cgctcaagc tcgacgaag aagaggtga tggaggacg 
      acaaggaat tgtccggcg ctgaagagg agaaggaag 
      tggagaagg cgctccaag ctcctcttt gtgatatct 
      tgaggttct cgaacgtgg agatacctc cggaggcgc 
      tcaaagccc tcctccaga agaataagg aaggacaag 
      aaccgtggg ccggcatgg agcacagcg aggtcggac 
      cttacatcc aaaacctcc tcctagcct cccagaacc 
      tcctcagca accagaaac ctctcgaaa actcggttc 
      taaacagtg tcgtgccag aattcgtaa aacggctga 
      taacggacg aaacaaaaa ataacggtg atacagtgt 
      caaggccga gtccgtcga attcggcag cacccaaac 
      ccaaatccg aatcggaca tggaaacgg aggagtcgc 
      cttcgaatg tgatactaa aaattccgt cctttaaac 
      cgacgtcga gcaagaacg gatgtgatt tattcagag 
      gttccgaaa ccggaagca tggtctcac ccccggtca 
      cgagcgagt cgggctcgc ccccgatcc tccccggca 
      aaggcatga cgatcaaag acgtcaagg acgtcatcg 
      ctcaaagca tcagccaga agttccagc agaccttgg 
      agcctcgac ggccttcca tctccgaga tggactaca 
      agcggggcg gtttcacgc cgccgctcg cctccggca 
      tctccgtca tgaagaccc aagacctca cccggccct 
      accagccgc cccccaagc cccagcaga gccccgcgc 
      ccgccaccg gcggcaagg gcacgcgcc ccaagcggg 
      gcaagtacc gcaactacg accgcgaca gcctcgtgg 
      aggcggtcc gggcggtgc aaaggggcg agatgtcgg 
      tgcaccgcg ccggcagct actacggcg tgccccact 
      cgaccctcg agtacaaag tcaaggaga ggcacctca 
      tgcggccgc ggaagcgcg accccaagc ccaaccccg 
      tcgacgaga aaatcgcca gcctcaagc agaacgaca 
      tccgagccc aggagaagc tcaaaccga tgatgaaac 
      ccccgcaga agttccctc cgacggcga cgtcgccca 
      acggcatca aactcccga ttttcgagc cggggatgg 
      cgccgctcg ccggctaca accctcctc ccttcccct 
      tctggccgc atcctggct tccaccaca tcccgttgg 
      agtacggcc gacccatac ctcccaacc cggagttct 
      tcgcctcgc agatgatgc aaaagctgc aggaggagt 
      cctccagga ccggaatca ccggacagg gcaccacgc 
      cgcccaatg ccccggcgt tggccaaaa gcgcaaggc 
      aaattgccg agtcactgc tcgatggga cgggctcca 
      acgggtcct tcttggacg gcatcatca ggtccagtc 
      tggagtcgg gagtgccca ccaacgagg agaaattat 
      ccaaagaag acaaaaacg tcgccgttg aaaacctct 
      ccaataaag cacttttag accaactgt gcaggaaca 
      gcagactga cgccacttt cgaagcctt cgatgactt 
      cagaaacca acagctcgg gagatgagt cctacagga 
      agggcgcca gtcctctca acttcacgg ctggagctt 
      cgaactcga aagagggcg acacctccc ccggcgagc 
      tgcccacaa tcgaactgt cgaacgatt cgaacgaat 
      caacggata aaagaccga tgataacgt cgccggaat 
      cggcgacga cgactacga catcaacaa caacagcaa 
      caagcacac caccggcta ggatttatc taaagaaag 
      atctggcga atccagaca accttcagc cggagatgc 
      tgatgcgct tccgggacg tccttcccg acttggagc 
      gtaacggcg tcggcgaag gcctcgtaa caggaagtg 
      cctcagata atgacgcgc ctcaagact gacacctaa 
      ctatcgtaa gtgagagat ttttataca aaacgtaca 
      cacaaaaag atgtgtgaa aatcaaaat ttcggtgta 
      ctatacacg atttacgcc cccaatccc caggataac 
      gacgtggtt gtaaagtga atattcgag ctcgatgac 
      ggtgtttgt tgattattt attttattt ttttgtctt 
      aatgttttt ttaggattt agtggtgag catcaaagc 
      agtgatttg tatattagg tgttttttg actcaaaac 
      aagatgtat ttattactg ggaaaaatt cataccatt 
      ccggctgga cggccgggt atcacacca cgtgccatc 
      ccaccacca tgtgataaa tgttgaatt ttttgcagg 
      atggggtga tactcgctc gtttcatga tacatgttt 
      attgttcat gttcggtgt ttttggcat gtaccaaaa 
      aaaatcgta tcatcggtg tactctcta tgtgtcttc 
      gacgtggcg tattatacc tcaaacttg tataaagtt 
      catgatgtt catgcattc agctgcttt gatgaggac 
      ggttcatat atattatat aatatcgaa aaacccatg 
      ggattgtcc cagaattga aaaaaaatt atatctatc 
      tgtgattta ttcaaaatt tttgatgta tattttctc 
      taaaaatat cttaaaata ttataaata attaaaaaa 
      ttaaacaat tagggagta gtgatcggt tggcgaact 
      gagtcgacc cgcattcag ttaaccgaa ccgactttc 
      gtttaattc atatgacaa tgaagtgca attagatgg 
      tatatacat aatatatat ttacatcaa tattaagta 
      gtctataag aatatataa aaagtatat tatatattt 
      caaaggaag ctattttgt tcgagagat aaaagattg 
      actcaaggt agagtttaa acgcttcat tcccccctt 
      cttcaacaa ccgtcagac atacaacca accactaac 
      caaaccgat accgacagt taaccgaat cggcgcgtc 
      cgattcctc aaaccaaac agatttcta cagtacaca 
      catatttaa gttggacca atgcagttg tatataatg 
      tggtatgct ttacatatc gtttggcgc ccagagcgc 
      gtctccact ccccgaagg tggcgcccg agactcgac 
      ctagccgcc aaaaccaaa cattccaac catatatgt 
      gccagattt tttattcgc gaaaattga acaatttaa 
      atgtttaaa aacagattg tgatctcgg cctcgggcc 
      ctttgatca tctcggaat gcatttttt gttttcgaa 
      gaagctgtg agcttccca gttctcgta gtcctaagg 
      ttcaaaaac actgtaatt ttaaatgtt tgtgtgttt 
      cacttttgc gcttgccaa ttacagttt ggggcgggg 
      ccgagggcg cttttcacc caccgactc ggctcctac 
      caaaaatac tcttcggct tgattgtag tgtatcaaa 
      attccgtaa ttccgcgcg attatagta gaaggaaaa 
      tttttcata tacaaaaca atattcagc aagtgtgcc 
      accgatttt tgtgcaatt tatatagca tttcttgca 
      tttcttatg tgataattt gttacgata aagacactt 
      tctttgact acgttcgct tttttccaa atgtgcggt 
      ccaaaaaca taaacctta aagtatacg cgttgaata 
      cacgatatt tttagtacg taaatctct tacaggctt 
      caaaagcac tatataatc aaaagaata aagttgttg 
      tcatttttt atcattatt tattgttgt tttattgag 
      cgacacatc acgcaaagc gggaaacct tgacggatt 
      tagcagcgc cctcttggc gccgccttt tctcagcgt 
      gtttcgtgt tttgccagt gtgatccgg gactttaca 
      gattatctg aaacggtac atttgacta ttcgacagt 
      tcgttttga taatcgatt attattacg
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY