Status
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Gene information
General information
TC011252 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007425.3: 677987..695853
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC011252
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
    {{ blurIdResult }}
    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
      {{ unavailableText }}

    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_05004

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 10.0% (includes death as pupa, adult)

    adult lethality - Number of animals showing the phenotype: 1 (9 dpi)
    Days post injection


    Fertility
    mature egg deposition blocked number 1st lateral oviduct: >5 number 2nd lateral oviduct: - Number of animals showing the phenotype: 4
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 100.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 100.0% (includes death as larva, prepupa, pupa, adult)

    larva lethality - Number of animals showing the phenotype: 1 (11 dpi)
    Days post injection


    pupal molt not fulfilled (died as L7 or prepupa) - Number of animals showing the phenotype: 9 (11 dpi)
    Days post injection



    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC011252 RA
      MNVTRIWTR GRPHSNEFV MEYTISYGT NGLDYADYK 
      EPSGNAMMF TGNSDGDSI HKNEFEVPI IAQWIRINP 
      TRWRDRISM RVELYGCDY EADRMYFNG TALLKLDMM 
      RDPVSASRE SIRFRFKTA VANGVVLYS RGTQGDYIA 
      LELRDNRML LKIDLGSGI VTSLCVGSL LDDNIWHDV 
      VISRNRRDI LFSVDRVVV QDKIKGEFN RLNLNQAFY 
      VGGVPNIQE GLEVVQNFT GCIENIYLN ATNLIRDLK 
      HANMYNEPA LRFERVNTL YNCPEPPII PVTFLTKNS 
      FAKLKGYEG MSSLNASFA FRTYEKDGL MFFHAFSTS 
      GHVAIFLEE GKIKVELIT SGVSKVVLD NYKEKFNDG 
      RWHSVVLTI STNLLIFNV DYRPMKTVR LLTIKTGGT 
      YLVAGGVTT SLGYSGQPM PGFIGCMRT IGIDGNYRL 
      PTDWTKGEY CCEDQVVFD ACRMTDRCN PNPCQHGGL 
      CKQNALEFF CDCKNTGYG GAVCHTSIN PLSCQAYKN 
      VQAVNHKAE IKIDVDGSG PLGPFPVTC EFYSDGRVA 
      TVLHHSNQE TTPVDGFQE PGSFRQDIH YEADDDQVA 
      ALINRSSTC RQHLQYACR GARLFNSPT DETRFSPFS 
      WWVSRHNQK MDYWGGALP GSRKCACGV SGTCVDPTK 
      WCNCDSSND YNADKWLVD AGDITEKEN LPVKQLRFG 
      DTGTALDYK EGRYTLGPL LCEGDDLFN NVITFRISD 
      ATINLPTFD MGHSGDIYF EFRTAVENA VLFHSKGPS 
      DFIKLSIVG GNQLQFQYQ AGLGPMAVI RETSYKLSD 
      DRWHSVSVE RNRKAAMII VDGALKAEV REPPGPVRA 
      LHLTSELVI GASTDYRDG FTGCIRALL INGQQVDLR 
      SYARRGLYG VTEGCIGKC QSNPCLNNG TCFERYDSY 
      WCDCRWTAF KGPICADEI GVNMRQTSM VKYDFMGSW 
      RSTIAENIR VGFTTTNPK GFLLGFSSN ISKEYLTIM 
      VSNSGHLRV VFDFGFERQ EVIYPEKLF SLGQYHDFR 
      LSRKNSGAT LVLQVDNNK PVEYHFNIK ASADAQFNN 
      IQYMYIGRN ESMTEGFIG CISRVEFDD IYPLKLLFQ 
      QSGPINVQS LGTPLTEDY CGVEPITHP PDLIETRPP 
      PIVDEEQLR KAYNQTDSA ILGSVLAII FLALVILAV 
      IIGRYLHRH KGEYLTQED AGADTALDP DTAVVHGTT 
      GHHVQKKKE WFI
    • >TC011252 RB
      MDLGGPFEI RSISTQGRK GSNEHVTEY IIQFSDDGE 
      AWRSFTDAQ GEIEMFTGN SDGDSIHKN EFEVPIIAQ 
      WIRINPTRW RDRISMRVE LYGCDYEAD RMYFNGTAL 
      LKLDMMRDP VSASRESIR FRFKTAVAN GVVLYSRGT 
      QGDYIALEL RDNRMLLKI DLGSGIVTS LCVGSLLDD 
      NIWHDVVIS RNRRDILFS VDRVVVQDK IKGEFNRLN 
      LNQAFYVGG VPNIQEGLE VVQNFTGCI ENIYLNATN 
      LIRDLKHAN MYNEPALRF ERVNTLYNC PEPPIIPVT 
      FLTKNSFAK LKGYEGMSS LNASFAFRT YEKDGLMFF 
      HAFSTSGHV AIFLEEGKI KVELITSGV SKVVLDNYK 
      EKFNDGRWH SVVLTISTN LLIFNVDYR PMKTVRLLT 
      IKTGGTYLV AGGVTTSLG YSGQPMPGF IGCMRTIGI 
      DGNYRLPTD WTKGEYCCE DQVVFDACR MTDRCNPNP 
      CQHGGLCKQ NALEFFCDC KNTGYGGAV CHTSINPLS 
      CQAYKNVQA VNHKAEIKI DVDGSGPLG PFPVTCEFY 
      SDGRVATVL HHSNQETTP VDGFQEPGS FRQDIHYEA 
      DDDQVAALI NRSSTCRQH LQYACRGAR LFNSPTDET 
      RFSPFSWWV SRHNQKMDY WGGALPGSR KCACGVSGT 
      CVDPTKWCN CDSSNDYNA DKWLVDAGD ITEKENLPV 
      KQLRFGDTG TALDYKEGR YTLGPLLCE GDDLFNNVI 
      TFRISDATI NLPTFDMGH SGDIYFEFR TAVENAVLF 
      HSKGPSDFI KLSIVGGNQ LQFQYQAGL GPMAVIRET 
      SYKLSDDRW HSVSVERNR KAAMIIVDG ALKAEVREP 
      PGPVRALHL TSELVIGAS TDYRDGFTG CIRALLING 
      QQVDLRSYA RRGLYGVTE GCIGKCQSN PCLNNGTCF 
      ERYDSYWCD CRWTAFKGP ICADEIGVN MRQTSMVKY 
      DFMGSWRST IAENIRVGF TTTNPKGFL LGFSSNISK 
      EYLTIMVSN SGHLRVVFD FGFERQEVI YPEKLFSLG 
      QYHDFRLSR KNSGATLVL QVDNNKPVE YHFNIKASA 
      DAQFNNIQY MYIGRNESM TEGFIGCIS RVEFDDIYP 
      LKLLFQQSG PINVQSLGT PLTEDYCGV EPITHPPDL 
      IETRPPPIV DEEQLRKAY NQTDSAILG SVLAIIFLA 
      LVILAVIIG RYLHRHKGE YLTQEDAGA DTALDPDTA 
      VVHGTTGHH VQKKKEWFI
    CDS sequence
    • >TC011252 RA
      atgaacgta acgaggatc tggacccgt ggtagacct 
      cacagcaat gagtttgta atggaatac actattagt 
      tatggtact aacggttta gattatgca gactacaaa 
      gaacctagt ggtaatgca atgatgttt acgggtaat 
      tcagacggt gactcgatt cacaaaaac gaattcgaa 
      gtgcccata atcgcgcaa tggattcgc ataaatccg 
      accagatgg cgcgaccgt atctcgatg agagtggag 
      ctctacggt tgtgattat gaggctgat cgtatgtat 
      ttcaacgga accgctttg ctcaagctc gatatgatg 
      cgagatccc gtgtcggca tctcgtgag agtatccga 
      tttaggttt aagacggct gtggcgaat ggagttgtg 
      ttgtacagt aggggaaca caaggagat tacattgct 
      ttggagtta cgagacaat aggatgttg cttaagatc 
      gatttagga tcgggaatt gtgactagt ttatgtgtc 
      ggaagtttg ctagacgat aatatttgg cacgacgtt 
      gttatttca aggaatcga agggatatt ttgttctcg 
      gttgataga gtggtggtt caggataag attaaaggg 
      gagttcaac agactcaac ttgaaccaa gcgttttac 
      gttggtgga gttcctaat attcaagag ggtttagaa 
      gtggtccaa aattttacc ggttgcatt gaaaatatt 
      tacttaaat gcaacaaat ctcattcgt gatttaaaa 
      cacgcgaat atgtataat gagccggcg ttgcgtttt 
      gaaagagtc aacactttg tacaactgt ccggaacct 
      ccaattatt ccagtcact ttcctgacg aagaattct 
      tttgcaaaa cttaagggt tatgaagga atgagttcg 
      ttgaatgct tcgtttgcc ttcagaacg tacgaaaag 
      gacggattg atgttcttc catgcgttt tcaacgtct 
      ggacatgtt gcgatattc ctagaagag ggaaaaatc 
      aaagtcgag ctaataacc tccggcgtt tcgaaagta 
      gttctcgac aactacaag gagaaattc aacgacggt 
      cgatggcac tctgtcgtc ttaacaatc agcaccaac 
      ttactaatc ttcaacgtg gactaccgc cctatgaaa 
      accgtccgc ctcctaacg atcaaaacc ggcggtact 
      tacctagta gcaggcggt gtaaccaca tctctcggt 
      tactcgggc caaccgatg cccggtttc atcggttgc 
      atgcgcaca atcggcatc gacggcaac taccgccta 
      ccaaccgat tggacaaaa ggcgaatac tgttgcgaa 
      gatcaagtc gtctttgac gcttgccga atgaccgat 
      cgctgcaac cccaaccca tgccaacac ggcgggctg 
      tgcaaacaa aacgcgctg gaattcttc tgcgattgc 
      aaaaacaca ggttatggc ggcgccgtt tgtcacact 
      tcaatcaat ccactgtcg tgtcaagcc tacaagaac 
      gtccaagcg gtcaatcac aaagccgag attaaaatc 
      gacgttgat gggagcggg ccgttgggc ccgtttccc 
      gtaacgtgc gagttttat tccgatggt cgcgttgcc 
      actgtctta caccacagt aaccaggag accacgcca 
      gttgatggg ttccaagaa ccggggagt tttcgacag 
      gacatacac tatgaagcg gatgatgat caagtggcc 
      gcgttgatt aaccggtca agtacgtgt cgacaacac 
      ttgcagtac gcgtgtcgt ggcgctcgt ttgtttaat 
      tcacccacg gatgagact agatttagt ccgttttcg 
      tggtgggtg tccagacac aaccagaag atggattat 
      tggggcggt gccttgcct ggatcacgt aaatgtgcg 
      tgtggtgtt tctggcact tgtgtggat ccaaccaag 
      tggtgtaat tgtgacagt agtaatgac tataacgct 
      gataagtgg ctagtcgat gctggggat ataaccgaa 
      aaggagaat ctcccagtg aaacaattg cggttcggt 
      gacaccgga accgccctc gattataaa gaaggtcgc 
      tacactttg gggccgttg ttgtgcgaa ggcgatgat 
      ttgtttaat aacgtgatc acgttccga atatcagac 
      gctactatc aatttgcca acttttgac atgggtcat 
      agtggtgat atatatttt gagttccga acagctgtg 
      gaaaacgct gttttgttc cattcaaaa ggcccgtct 
      gactttatc aagttgagt atagttggt ggtaaccaa 
      ctacaattc caatatcaa gccggcttg ggccccatg 
      gctgtgatc cgcgaaacg tcatataaa ctctcggac 
      gatagatgg cactcagtc tcagtcgaa cgtaacagg 
      aaggcggcc atgatcatt gttgacggt gctttgaag 
      gccgaagtg agggaaccc ccgggtccc gtgcgcgcc 
      ctccacctg acttcggaa cttgtgatc ggggcgtcc 
      acggactac cgcgatggc ttcaccggg tgcattcgc 
      gccctttta atcaacgga caacaagtc gatttgaga 
      agttacgcc cgtcggggg ctatacggc gtaaccgaa 
      ggttgtatc ggcaagtgt caaagcaac ccatgcctc 
      aataacggc acttgtttc gagcgctat gacagttac 
      tggtgtgat tgtcgttgg acggcgttc aaagggccg 
      atttgtgcc gacgaaatc ggtgttaac atgcgtcag 
      acgtccatg gttaagtac gattttatg gggtcgtgg 
      cgttcgacc attgccgaa aatatccga gtcgggttc 
      acgacgacg aatcccaaa ggtttcctt ttgggtttc 
      tcgtcgaat atctcgaag gagtatttg actattatg 
      gtgtcgaat tcgggacat ttgcgtgtg gttttcgat 
      tttgggttc gaacggcag gaggtgatc tatccggag 
      aagctgttc agtttgggg cagtatcac gattttcga 
      ctctcgcgg aagaattcg ggggccacg ttggtgctt 
      caggttgat aataataaa ccggttgag tatcacttt 
      aatattaag gcgtcggcc gatgcacag ttcaataac 
      atacagtat atgtatatt ggacggaat gagtcgatg 
      actgagggt ttcattggt tgtatttcg cgggtcgag 
      tttgatgat atttatcca ttgaagttg ttgttccaa 
      cagtcgggg cctattaac gtccagtcg ttaggaact 
      ccgttgact gaggattat tgtggggtg gaacccata 
      actcatccg cccgatctc attgaaacg agaccaccg 
      cccatcgtt gatgaggag cagttgagg aaggcgtac 
      aatcaaacg gattcagct attttagga agtgttttg 
      gcgattatt ttcctagct ttggtgatc ctggccgta 
      ataattggg cgatatttg caccgtcac aaaggcgaa 
      tatttgacg caggaggac gcaggagcc gacactgca 
      ctcgaccca gacaccgct gttgtacac ggaacaaca 
      ggacatcac gtccagaaa aagaaggag tggttcata 
      tag
    • >TC011252 RB
      atggattta gggggtcct tttgagatc cgctcgatt 
      agtacgcaa ggtcggaaa gggtccaac gagcacgtt 
      accgaatat attatacag ttttctgac gacggggag 
      gcttggagg agctttact gatgctcaa ggagaaatc 
      gagatgttt acgggtaat tcagacggt gactcgatt 
      cacaaaaac gaattcgaa gtgcccata atcgcgcaa 
      tggattcgc ataaatccg accagatgg cgcgaccgt 
      atctcgatg agagtggag ctctacggt tgtgattat 
      gaggctgat cgtatgtat ttcaacgga accgctttg 
      ctcaagctc gatatgatg cgagatccc gtgtcggca 
      tctcgtgag agtatccga tttaggttt aagacggct 
      gtggcgaat ggagttgtg ttgtacagt aggggaaca 
      caaggagat tacattgct ttggagtta cgagacaat 
      aggatgttg cttaagatc gatttagga tcgggaatt 
      gtgactagt ttatgtgtc ggaagtttg ctagacgat 
      aatatttgg cacgacgtt gttatttca aggaatcga 
      agggatatt ttgttctcg gttgataga gtggtggtt 
      caggataag attaaaggg gagttcaac agactcaac 
      ttgaaccaa gcgttttac gttggtgga gttcctaat 
      attcaagag ggtttagaa gtggtccaa aattttacc 
      ggttgcatt gaaaatatt tacttaaat gcaacaaat 
      ctcattcgt gatttaaaa cacgcgaat atgtataat 
      gagccggcg ttgcgtttt gaaagagtc aacactttg 
      tacaactgt ccggaacct ccaattatt ccagtcact 
      ttcctgacg aagaattct tttgcaaaa cttaagggt 
      tatgaagga atgagttcg ttgaatgct tcgtttgcc 
      ttcagaacg tacgaaaag gacggattg atgttcttc 
      catgcgttt tcaacgtct ggacatgtt gcgatattc 
      ctagaagag ggaaaaatc aaagtcgag ctaataacc 
      tccggcgtt tcgaaagta gttctcgac aactacaag 
      gagaaattc aacgacggt cgatggcac tctgtcgtc 
      ttaacaatc agcaccaac ttactaatc ttcaacgtg 
      gactaccgc cctatgaaa accgtccgc ctcctaacg 
      atcaaaacc ggcggtact tacctagta gcaggcggt 
      gtaaccaca tctctcggt tactcgggc caaccgatg 
      cccggtttc atcggttgc atgcgcaca atcggcatc 
      gacggcaac taccgccta ccaaccgat tggacaaaa 
      ggcgaatac tgttgcgaa gatcaagtc gtctttgac 
      gcttgccga atgaccgat cgctgcaac cccaaccca 
      tgccaacac ggcgggctg tgcaaacaa aacgcgctg 
      gaattcttc tgcgattgc aaaaacaca ggttatggc 
      ggcgccgtt tgtcacact tcaatcaat ccactgtcg 
      tgtcaagcc tacaagaac gtccaagcg gtcaatcac 
      aaagccgag attaaaatc gacgttgat gggagcggg 
      ccgttgggc ccgtttccc gtaacgtgc gagttttat 
      tccgatggt cgcgttgcc actgtctta caccacagt 
      aaccaggag accacgcca gttgatggg ttccaagaa 
      ccggggagt tttcgacag gacatacac tatgaagcg 
      gatgatgat caagtggcc gcgttgatt aaccggtca 
      agtacgtgt cgacaacac ttgcagtac gcgtgtcgt 
      ggcgctcgt ttgtttaat tcacccacg gatgagact 
      agatttagt ccgttttcg tggtgggtg tccagacac 
      aaccagaag atggattat tggggcggt gccttgcct 
      ggatcacgt aaatgtgcg tgtggtgtt tctggcact 
      tgtgtggat ccaaccaag tggtgtaat tgtgacagt 
      agtaatgac tataacgct gataagtgg ctagtcgat 
      gctggggat ataaccgaa aaggagaat ctcccagtg 
      aaacaattg cggttcggt gacaccgga accgccctc 
      gattataaa gaaggtcgc tacactttg gggccgttg 
      ttgtgcgaa ggcgatgat ttgtttaat aacgtgatc 
      acgttccga atatcagac gctactatc aatttgcca 
      acttttgac atgggtcat agtggtgat atatatttt 
      gagttccga acagctgtg gaaaacgct gttttgttc 
      cattcaaaa ggcccgtct gactttatc aagttgagt 
      atagttggt ggtaaccaa ctacaattc caatatcaa 
      gccggcttg ggccccatg gctgtgatc cgcgaaacg 
      tcatataaa ctctcggac gatagatgg cactcagtc 
      tcagtcgaa cgtaacagg aaggcggcc atgatcatt 
      gttgacggt gctttgaag gccgaagtg agggaaccc 
      ccgggtccc gtgcgcgcc ctccacctg acttcggaa 
      cttgtgatc ggggcgtcc acggactac cgcgatggc 
      ttcaccggg tgcattcgc gccctttta atcaacgga 
      caacaagtc gatttgaga agttacgcc cgtcggggg 
      ctatacggc gtaaccgaa ggttgtatc ggcaagtgt 
      caaagcaac ccatgcctc aataacggc acttgtttc 
      gagcgctat gacagttac tggtgtgat tgtcgttgg 
      acggcgttc aaagggccg atttgtgcc gacgaaatc 
      ggtgttaac atgcgtcag acgtccatg gttaagtac 
      gattttatg gggtcgtgg cgttcgacc attgccgaa 
      aatatccga gtcgggttc acgacgacg aatcccaaa 
      ggtttcctt ttgggtttc tcgtcgaat atctcgaag 
      gagtatttg actattatg gtgtcgaat tcgggacat 
      ttgcgtgtg gttttcgat tttgggttc gaacggcag 
      gaggtgatc tatccggag aagctgttc agtttgggg 
      cagtatcac gattttcga ctctcgcgg aagaattcg 
      ggggccacg ttggtgctt caggttgat aataataaa 
      ccggttgag tatcacttt aatattaag gcgtcggcc 
      gatgcacag ttcaataac atacagtat atgtatatt 
      ggacggaat gagtcgatg actgagggt ttcattggt 
      tgtatttcg cgggtcgag tttgatgat atttatcca 
      ttgaagttg ttgttccaa cagtcgggg cctattaac 
      gtccagtcg ttaggaact ccgttgact gaggattat 
      tgtggggtg gaacccata actcatccg cccgatctc 
      attgaaacg agaccaccg cccatcgtt gatgaggag 
      cagttgagg aaggcgtac aatcaaacg gattcagct 
      attttagga agtgttttg gcgattatt ttcctagct 
      ttggtgatc ctggccgta ataattggg cgatatttg 
      caccgtcac aaaggcgaa tatttgacg caggaggac 
      gcaggagcc gacactgca ctcgaccca gacaccgct 
      gttgtacac ggaacaaca ggacatcac gtccagaaa 
      aagaaggag tggttcata tag
    mRNA sequence
    • >TC011252 RA
      acgaaggtg ggaacgcat ggagtgccg aagaaaacg 
      attttgacc aacacctaa tcgttgatt tgggcgaag 
      taatgaacg taacgagga tctggaccc gtggtagac 
      ctcacagca atgagtttg taatggaat acactatta 
      gttatggta ctaacggtt tagattatg cagactaca 
      aagaaccta gtggtaatg caatgatgt ttacgggta 
      attcagacg gtgactcga ttcacaaaa acgaattcg 
      aagtgccca taatcgcgc aatggattc gcataaatc 
      cgaccagat ggcgcgacc gtatctcga tgagagtgg 
      agctctacg gttgtgatt atgaggctg atcgtatgt 
      atttcaacg gaaccgctt tgctcaagc tcgatatga 
      tgcgagatc ccgtgtcgg catctcgtg agagtatcc 
      gatttaggt ttaagacgg ctgtggcga atggagttg 
      tgttgtaca gtaggggaa cacaaggag attacattg 
      ctttggagt tacgagaca ataggatgt tgcttaaga 
      tcgatttag gatcgggaa ttgtgacta gtttatgtg 
      tcggaagtt tgctagacg ataatattt ggcacgacg 
      ttgttattt caaggaatc gaagggata ttttgttct 
      cggttgata gagtggtgg ttcaggata agattaaag 
      gggagttca acagactca acttgaacc aagcgtttt 
      acgttggtg gagttccta atattcaag agggtttag 
      aagtggtcc aaaatttta ccggttgca ttgaaaata 
      tttacttaa atgcaacaa atctcattc gtgatttaa 
      aacacgcga atatgtata atgagccgg cgttgcgtt 
      ttgaaagag tcaacactt tgtacaact gtccggaac 
      ctccaatta ttccagtca ctttcctga cgaagaatt 
      cttttgcaa aacttaagg gttatgaag gaatgagtt 
      cgttgaatg cttcgtttg ccttcagaa cgtacgaaa 
      aggacggat tgatgttct tccatgcgt tttcaacgt 
      ctggacatg ttgcgatat tcctagaag agggaaaaa 
      tcaaagtcg agctaataa cctccggcg tttcgaaag 
      tagttctcg acaactaca aggagaaat tcaacgacg 
      gtcgatggc actctgtcg tcttaacaa tcagcacca 
      acttactaa tcttcaacg tggactacc gccctatga 
      aaaccgtcc gcctcctaa cgatcaaaa ccggcggta 
      cttacctag tagcaggcg gtgtaacca catctctcg 
      gttactcgg gccaaccga tgcccggtt tcatcggtt 
      gcatgcgca caatcggca tcgacggca actaccgcc 
      taccaaccg attggacaa aaggcgaat actgttgcg 
      aagatcaag tcgtctttg acgcttgcc gaatgaccg 
      atcgctgca accccaacc catgccaac acggcgggc 
      tgtgcaaac aaaacgcgc tggaattct tctgcgatt 
      gcaaaaaca caggttatg gcggcgccg tttgtcaca 
      cttcaatca atccactgt cgtgtcaag cctacaaga 
      acgtccaag cggtcaatc acaaagccg agattaaaa 
      tcgacgttg atgggagcg ggccgttgg gcccgtttc 
      ccgtaacgt gcgagtttt attccgatg gtcgcgttg 
      ccactgtct tacaccaca gtaaccagg agaccacgc 
      cagttgatg ggttccaag aaccgggga gttttcgac 
      aggacatac actatgaag cggatgatg atcaagtgg 
      ccgcgttga ttaaccggt caagtacgt gtcgacaac 
      acttgcagt acgcgtgtc gtggcgctc gtttgttta 
      attcaccca cggatgaga ctagattta gtccgtttt 
      cgtggtggg tgtccagac acaaccaga agatggatt 
      attggggcg gtgccttgc ctggatcac gtaaatgtg 
      cgtgtggtg tttctggca cttgtgtgg atccaacca 
      agtggtgta attgtgaca gtagtaatg actataacg 
      ctgataagt ggctagtcg atgctgggg atataaccg 
      aaaaggaga atctcccag tgaaacaat tgcggttcg 
      gtgacaccg gaaccgccc tcgattata aagaaggtc 
      gctacactt tggggccgt tgttgtgcg aaggcgatg 
      atttgttta ataacgtga tcacgttcc gaatatcag 
      acgctacta tcaatttgc caacttttg acatgggtc 
      atagtggtg atatatatt ttgagttcc gaacagctg 
      tggaaaacg ctgttttgt tccattcaa aaggcccgt 
      ctgacttta tcaagttga gtatagttg gtggtaacc 
      aactacaat tccaatatc aagccggct tgggcccca 
      tggctgtga tccgcgaaa cgtcatata aactctcgg 
      acgatagat ggcactcag tctcagtcg aacgtaaca 
      ggaaggcgg ccatgatca ttgttgacg gtgctttga 
      aggccgaag tgagggaac ccccgggtc ccgtgcgcg 
      ccctccacc tgacttcgg aacttgtga tcggggcgt 
      ccacggact accgcgatg gcttcaccg ggtgcattc 
      gcgcccttt taatcaacg gacaacaag tcgatttga 
      gaagttacg cccgtcggg ggctatacg gcgtaaccg 
      aaggttgta tcggcaagt gtcaaagca acccatgcc 
      tcaataacg gcacttgtt tcgagcgct atgacagtt 
      actggtgtg attgtcgtt ggacggcgt tcaaagggc 
      cgatttgtg ccgacgaaa tcggtgtta acatgcgtc 
      agacgtcca tggttaagt acgatttta tggggtcgt 
      ggcgttcga ccattgccg aaaatatcc gagtcgggt 
      tcacgacga cgaatccca aaggtttcc ttttgggtt 
      tctcgtcga atatctcga aggagtatt tgactatta 
      tggtgtcga attcgggac atttgcgtg tggttttcg 
      attttgggt tcgaacggc aggaggtga tctatccgg 
      agaagctgt tcagtttgg ggcagtatc acgattttc 
      gactctcgc ggaagaatt cgggggcca cgttggtgc 
      ttcaggttg ataataata aaccggttg agtatcact 
      ttaatatta aggcgtcgg ccgatgcac agttcaata 
      acatacagt atatgtata ttggacgga atgagtcga 
      tgactgagg gtttcattg gttgtattt cgcgggtcg 
      agtttgatg atatttatc cattgaagt tgttgttcc 
      aacagtcgg ggcctatta acgtccagt cgttaggaa 
      ctccgttga ctgaggatt attgtgggg tggaaccca 
      taactcatc cgcccgatc tcattgaaa cgagaccac 
      cgcccatcg ttgatgagg agcagttga ggaaggcgt 
      acaatcaaa cggattcag ctattttag gaagtgttt 
      tggcgatta ttttcctag ctttggtga tcctggccg 
      taataattg ggcgatatt tgcaccgtc acaaaggcg 
      aatatttga cgcaggagg acgcaggag ccgacactg 
      cactcgacc cagacaccg ctgttgtac acggaacaa 
      caggacatc acgtccaga aaaagaagg agtggttca 
      tatagtcga aaattcgtt aaattaatt atgggccta 
      atagtacaa caagattgt tttaaataa ggcagtttt 
      cacggttgt gaaaattta tttacattg aaagaccgt 
      ttatttttt tattgtttt tatttagga tgtgttcat 
      gtggcataa acttttgtt ttgtgcaat ttctgtact 
      tttttgact tagtttctt tccgtccat tttatttta 
      ggagtcgca gactccgcg tatttaaca acattccag 
      tattattta tggttctaa aacactaaa attcgatca 
      cttgatctt ccaaaaggt tagtcgcta gaataagtg 
      cctttttac ggcatgtca tcgatactt tgcactgta 
      acttatctt ttgttgctt ttttaaatt gtattatat 
      tgtaatact gactagtat gagatattg tgtaatttt 
      ttacaaata aaaatacat aaaacac
    • >TC011252 RB
      acgaaggtg ggaacgcat ggagtgccg aagaaaacg 
      attttgacc aacacctaa tcgttgatt tgggcgaag 
      taatgaacg taacgagga tctggaccc gtggtagac 
      ctcacagca atgagtttg taatggaat acactatta 
      gttatggta ctaacggtt tagattatg cagactaca 
      aagaaccta gtggtaatg caatggtga gatattacc 
      catcttttt ttttctcgt taatcatgg gtatcagtc 
      tacgtttta ctaatcctg catgtttgt ggctgtcgt 
      agttgtgct aattttgcc tactaacat tctgcaatc 
      tattaacac taaacactt ggctatagg atcgtccgc 
      ttggagtcc ggaagaaag cacatattt tcactttct 
      aacaatgga tttaggggg tccttttga gatccgctc 
      gattagtac gcaaggtcg gaaagggtc caacgagca 
      cgttaccga atatattat acagttttc tgacgacgg 
      ggaggcttg gaggagctt tactgatgc tcaaggaga 
      aatcgagat gtttacggg taattcaga cggtgactc 
      gattcacaa aaacgaatt cgaagtgcc cataatcgc 
      gcaatggat tcgcataaa tccgaccag atggcgcga 
      ccgtatctc gatgagagt ggagctcta cggttgtga 
      ttatgaggc tgatcgtat gtatttcaa cggaaccgc 
      tttgctcaa gctcgatat gatgcgaga tcccgtgtc 
      ggcatctcg tgagagtat ccgatttag gtttaagac 
      ggctgtggc gaatggagt tgtgttgta cagtagggg 
      aacacaagg agattacat tgctttgga gttacgaga 
      caataggat gttgcttaa gatcgattt aggatcggg 
      aattgtgac tagtttatg tgtcggaag tttgctaga 
      cgataatat ttggcacga cgttgttat ttcaaggaa 
      tcgaaggga tattttgtt ctcggttga tagagtggt 
      ggttcagga taagattaa aggggagtt caacagact 
      caacttgaa ccaagcgtt ttacgttgg tggagttcc 
      taatattca agagggttt agaagtggt ccaaaattt 
      taccggttg cattgaaaa tatttactt aaatgcaac 
      aaatctcat tcgtgattt aaaacacgc gaatatgta 
      taatgagcc ggcgttgcg ttttgaaag agtcaacac 
      tttgtacaa ctgtccgga acctccaat tattccagt 
      cactttcct gacgaagaa ttcttttgc aaaacttaa 
      gggttatga aggaatgag ttcgttgaa tgcttcgtt 
      tgccttcag aacgtacga aaaggacgg attgatgtt 
      cttccatgc gttttcaac gtctggaca tgttgcgat 
      attcctaga agagggaaa aatcaaagt cgagctaat 
      aacctccgg cgtttcgaa agtagttct cgacaacta 
      caaggagaa attcaacga cggtcgatg gcactctgt 
      cgtcttaac aatcagcac caacttact aatcttcaa 
      cgtggacta ccgccctat gaaaaccgt ccgcctcct 
      aacgatcaa aaccggcgg tacttacct agtagcagg 
      cggtgtaac cacatctct cggttactc gggccaacc 
      gatgcccgg tttcatcgg ttgcatgcg cacaatcgg 
      catcgacgg caactaccg cctaccaac cgattggac 
      aaaaggcga atactgttg cgaagatca agtcgtctt 
      tgacgcttg ccgaatgac cgatcgctg caaccccaa 
      cccatgcca acacggcgg gctgtgcaa acaaaacgc 
      gctggaatt cttctgcga ttgcaaaaa cacaggtta 
      tggcggcgc cgtttgtca cacttcaat caatccact 
      gtcgtgtca agcctacaa gaacgtcca agcggtcaa 
      tcacaaagc cgagattaa aatcgacgt tgatgggag 
      cgggccgtt gggcccgtt tcccgtaac gtgcgagtt 
      ttattccga tggtcgcgt tgccactgt cttacacca 
      cagtaacca ggagaccac gccagttga tgggttcca 
      agaaccggg gagttttcg acaggacat acactatga 
      agcggatga tgatcaagt ggccgcgtt gattaaccg 
      gtcaagtac gtgtcgaca acacttgca gtacgcgtg 
      tcgtggcgc tcgtttgtt taattcacc cacggatga 
      gactagatt tagtccgtt ttcgtggtg ggtgtccag 
      acacaacca gaagatgga ttattgggg cggtgcctt 
      gcctggatc acgtaaatg tgcgtgtgg tgtttctgg 
      cacttgtgt ggatccaac caagtggtg taattgtga 
      cagtagtaa tgactataa cgctgataa gtggctagt 
      cgatgctgg ggatataac cgaaaagga gaatctccc 
      agtgaaaca attgcggtt cggtgacac cggaaccgc 
      cctcgatta taaagaagg tcgctacac tttggggcc 
      gttgttgtg cgaaggcga tgatttgtt taataacgt 
      gatcacgtt ccgaatatc agacgctac tatcaattt 
      gccaacttt tgacatggg tcatagtgg tgatatata 
      ttttgagtt ccgaacagc tgtggaaaa cgctgtttt 
      gttccattc aaaaggccc gtctgactt tatcaagtt 
      gagtatagt tggtggtaa ccaactaca attccaata 
      tcaagccgg cttgggccc catggctgt gatccgcga 
      aacgtcata taaactctc ggacgatag atggcactc 
      agtctcagt cgaacgtaa caggaaggc ggccatgat 
      cattgttga cggtgcttt gaaggccga agtgaggga 
      acccccggg tcccgtgcg cgccctcca cctgacttc 
      ggaacttgt gatcggggc gtccacgga ctaccgcga 
      tggcttcac cgggtgcat tcgcgccct tttaatcaa 
      cggacaaca agtcgattt gagaagtta cgcccgtcg 
      ggggctata cggcgtaac cgaaggttg tatcggcaa 
      gtgtcaaag caacccatg cctcaataa cggcacttg 
      tttcgagcg ctatgacag ttactggtg tgattgtcg 
      ttggacggc gttcaaagg gccgatttg tgccgacga 
      aatcggtgt taacatgcg tcagacgtc catggttaa 
      gtacgattt tatggggtc gtggcgttc gaccattgc 
      cgaaaatat ccgagtcgg gttcacgac gacgaatcc 
      caaaggttt ccttttggg tttctcgtc gaatatctc 
      gaaggagta tttgactat tatggtgtc gaattcggg 
      acatttgcg tgtggtttt cgattttgg gttcgaacg 
      gcaggaggt gatctatcc ggagaagct gttcagttt 
      ggggcagta tcacgattt tcgactctc gcggaagaa 
      ttcgggggc cacgttggt gcttcaggt tgataataa 
      taaaccggt tgagtatca ctttaatat taaggcgtc 
      ggccgatgc acagttcaa taacataca gtatatgta 
      tattggacg gaatgagtc gatgactga gggtttcat 
      tggttgtat ttcgcgggt cgagtttga tgatattta 
      tccattgaa gttgttgtt ccaacagtc ggggcctat 
      taacgtcca gtcgttagg aactccgtt gactgagga 
      ttattgtgg ggtggaacc cataactca tccgcccga 
      tctcattga aacgagacc accgcccat cgttgatga 
      ggagcagtt gaggaaggc gtacaatca aacggattc 
      agctatttt aggaagtgt tttggcgat tattttcct 
      agctttggt gatcctggc cgtaataat tgggcgata 
      tttgcaccg tcacaaagg cgaatattt gacgcagga 
      ggacgcagg agccgacac tgcactcga cccagacac 
      cgctgttgt acacggaac aacaggaca tcacgtcca 
      gaaaaagaa ggagtggtt catatagtc gaaaattcg 
      ttaaattaa ttatgggcc taatagtac aacaagatt 
      gttttaaat aaggcagtt ttcacggtt gtgaaaatt 
      tatttacat tgaaagacc gtttatttt tttattgtt 
      tttatttag gatgtgttc atgtggcat aaacttttg 
      ttttgtgca atttctgta cttttttga cttagtttc 
      tttccgtcc attttattt taggagtcg cagactccg 
      cgtatttaa caacattcc agtattatt tatggttct 
      aaaacacta aaattcgat cacttgatc ttccaaaag 
      gttagtcgc tagaataag tgccttttt acggcatgt 
      catcgatac tttgcactg taacttatc ttttgttgc 
      ttttttaaa ttgtattat attgtaata ctgactagt 
      atgagatat tgtgtaatt ttttacaaa taaaaatac 
      ataaaacac
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY