Status
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Gene information
General information
TC034277
Former TC numbers

If one gene is splitted or genes are merged, the original TC numbers are listed. One listed former TC number indicates the previous gene has be splitted, serveral former TC number represents a merged gene.

TC010969,TC010970 		Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007424.3: 3098421..3180526
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    		TC034277
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes

    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
    {{ blurIdResult }}
    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
      {{ unavailableText }}

    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_04954

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 40.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 3 (3 dpi)
    Days post injection

    adult lethality - Number of animals showing the phenotype: 1 (9 dpi)
    Days post injection

    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 50
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 0.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 20.0% (includes death as larva, prepupa, pupa, adult)

    adult lethality - Number of animals showing the phenotype: 2 (22 dpi)
    Days post injection

    iBeetle screen iB_04955

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: -1.0% (includes death as pupa, adult)

    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 20.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 20.0% (includes death as larva, prepupa, pupa, adult)

    larva lethality - Number of animals showing the phenotype: 2 (11 dpi)
    Days post injection

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC034277 RA
      MYVISPADE VVYLSYGRV IYIPSSLPT NRVTKPIRT 
SLSTGSHTS YPSVPSTST SSTKSRQST ASEPVFSLN 
KLKPTSSSK SLNQPSTSR EKSPNEPPP VRPSRKKKL 
KVALESARK QSFSDFLSI SREKSPKTP VNQTPEKSP 
TIRLFRGKS VSPKNLGRN RTAVDFDSL FIREASPGK 
LSVKSLNNV DETGPRLTG KQRLTPEKS SPTKKRTFF 
GSVRVKRIP EVIEKMAGY ESALKELTH AGYNEHLKS 
HNSVAFKLV RTVSDFTQQ LGQMYEQHA EELQMLVAN 
FRKRNGELR KERPACPSS LFHTWETLL QEVEIDSQA 
LGEIASILG RQVSRPLLE RSFHRKIQS RKVFTQRES 
YETIIAKTE EKLVKCRQE YKNAYLAYL SNPTTESLS 
SYFNSHNTY VQQLHATNG MLEEYGKDT LPSLLQELE 
EIYSDLCAA VSEAVAQGA EVVSSRAKE QCKRYDGLV 
SQCKSISSS SDLAHLARS LPTPTGRAP ILKRPFVPP 
QPPPPPDPV DGEPQDMQN LQDNIPPPL KDELVIDRL 
SALQVKPSH DVLKKEAAD LEAQIRQIQ DALETLLRI 
QQRSVEAAL YNKANELQE DISMKRFDL RVAQIHLSA 
INAQKELFT SKLEGDTGR ERKMSSAST ASMKNKWLK 
AFKSLKTPP PENTEKKNG SAATRELLK GDPDAHNFQ 
EYTYKKITP CDVCSQVLR GHTRQGLKC RICKMNVHL 
DCQDKASKC QTKQRLLRR QKSTSEIET RIQDVTAED 
EKSPEVDQI YQVLKQATE ISNSKPRVN VEPAPPGIT 
VDRTVTSNP GSSGSSGQS LNRRPGPPI QPPRAAGSN 
LAVVNPAPC STSSGLSRL EDLKDAFTT ILG
    • >TC034277 RB
      MYVISPADE VVYLSYGRV IYIPSSLPT NRVTKPIRT 
SLSTGSHTS YPSVPSTST SSTKSRQST ASEPVFSLN 
KLKPTSSSK SLNQPSTSR EKSPNEPPP VRPSRKKKL 
KVALESARK QSFSDFLSI SREKSPKTP VNQTPEKSP 
TIRLFRGKS VSPKNLGRN RTAVDFDSL FIREASPGK 
LSVKSLNNV DETGPRLTG KQRLTPEKS SPTKKRTFF 
GSVRVKRIP EVIEKMAGY ESALKELTH AGYNEHLKS 
HNSVAFKLV RTVSDFTQQ LGQMYEQHA EELQMLVAN 
FRKRNGELR KERPACPSS LFHTWETLL QEVEIDSQA 
LGEIASILG RQVSRPLLE RSFHRKIQS RKVFTQRES 
YETIIAKTE EKLVKCRQE YKNAYLAYL SNPTTESLS 
SYFNSHNTY VQQLHATNG MLEEYGKDT LPSLLQELE 
EIYSDLCAA VSEAVAQGA EVVSSRAKE QCKRYDGLV 
SQCKSISSS SDLAHLARS LPTPTGRAP ILKRPFVPP 
QPPPPPDPV DGEPQDMQN LQDNIPPPL KDELVIDRL 
SALQVKPSH DVLKKEAAD LEAQIRQIQ DALETLLRI 
QQRSVEAAL YNKANELQE DISMKRFDL RVAQIHLSA 
INAQKELFT SKLEGDTGR ERKMSSAST ASMKNKWLK 
AFKSLKTPP PENTEKKNG SAATRELLK GDPDAHNFQ 
EYTYKKITP CDVCSQVLR GHTRQGLKC RICKMNVHL 
DCQDKASKC QTKQRLLRR QKSTSEIET RIQDVTAED 
EKKNEMYSG MPTINRHLS VRDNNRLYP PPNAVIESP 
EVDQIYQVL KQATEISNS KPRVNVEPA PPGITVDRT 
VTSNPGSSG SSGQSLNRR PGPPIQPPR AAGSNLAVV 
NPAPCSTSS GLSRLEDLK DAFTTILG
    CDS sequence
    • >TC034277 RA
      atgtatgtg atatctccg gcagatgaa gtagtctat 
ctgtcatat ggtcgagtc atatacatc ccttcgtcc 
ctgcccaca aaccgtgtg accaaaccg attagaacc 
tccctgtcg accggaagt cacacgtct tatcccagt 
gtcccctca acgagtacc agttcaaca aagagccga 
caatcaact gccagcgaa ccagtcttt agccttaac 
aaactaaaa ccaaccagt tcgtcgaaa tccctaaac 
caaccctct accagccgt gaaaagtcc ccaaacgaa 
ccacccccg gtcagaccg tcgagaaag aaaaaactc 
aaagtcgcc cttgaatca gcacggaaa cagtcattt 
tcggatttc ctctcaatc agtcgcgaa aaatcaccc 
aaaacccca gtcaaccaa acgccggaa aaatcgccg 
accattcga ctgttccga ggaaaatca gtcagtccc 
aaaaaccta ggaagaaac agaacagca gtagatttc 
gattccctt tttatccgc gaagccagt ccgggaaag 
ctctccgtc aaaagtttg aataacgtt gacgagacc 
ggtcctagg ctgaccgga aaacagcga ctgacccca 
gaaaagtcg tcgcccacc aagaaaaga acgttcttt 
ggaagcgtt cgcgttaag agaatccct gaagtcatc 
gagaagatg gcgggttac gaatcggcc ttgaaagaa 
ctgacacat gcaggatac aacgaacac ctcaaatcc 
cacaactcg gtcgcgttt aaattggtg cgaaccgta 
tcggatttc acacaacag ctgggtcag atgtacgaa 
cagcatgcc gaagaatta caaatgttg gtcgcaaac 
tttcgaaaa cgaaacggc gaacttagg aaagaaaga 
cctgcgtgc ccgagttcg ttgtttcac acctgggag 
acgctgctt caagaggtg gaaattgat tctcaggcc 
ctcggcgag atcgcgtcg atcttaggg aggcaagta 
tcacggccg cttctggag aggtccttc cacaggaag 
atacagtct aggaaagtg ttcacacaa agggagagc 
tatgagacg atcattgcc aaaactgaa gagaagttg 
gttaagtgt cggcaagaa tataagaat gcctactta 
gcgtacctt tcgaatccc acaacggag agcctgagc 
tcctatttc aacagccac aacacttac gtccaacaa 
ctccacgcg acaaacggg atgttggaa gagtacgga 
aaggatact ttaccatca cttttacag gaattagag 
gagatctac agtgatttg tgcgcggcg gtttctgag 
gctgtcgct caaggggca gaagtggtc tcttcgagg 
gcgaaggag caatgcaag aggtatgac ggtttagtt 
tcccaatgc aaatccatc tcgtcgtca tcggatttg 
gcccactta gcgcgatct ctgcccacc cccacgggc 
agggccccc attcttaag agaccattc gttccacct 
caaccgccc ccacctccg gatcccgta gacggcgaa 
ccgcaagac atgcaaaac ctccaggat aacatcccc 
ccgcctctc aaggacgaa ctagtaata gacagacta 
tcggcgctc caagtgaag ccttcccac gatgttttg 
aaaaaggaa gcggctgat ttagaggcg caaatcaga 
caaatccaa gacgctcta gaaacgttg ctgaggatt 
cagcaacga tcggttgaa gcggcactt tataacaaa 
gccaacgaa ctccaagag gatatttcg atgaagcga 
ttcgatcta agggtggct cagatccat cttagcgcg 
atcaacgct cagaaagag ctttttacg agcaaactg 
gagggagat acaggtcgt gaaagaaaa atgtcttca 
gcgtcgacg gcaagcatg aaaaataaa tggttgaaa 
gcttttaag agtttaaaa actccaccg ccagaaaac 
acagagaag aaaaatggt tcggctgcc acgagagag 
ctcctaaaa ggtgatcca gacgctcac aatttccaa 
gagtataca tacaagaaa attacaccc tgcgacgta 
tgctcgcaa gtattgaga gggcacaca agacagggt 
ctgaaatgt agaatatgc aaaatgaac gttcatctc 
gactgtcag gacaaagcg tccaaatgt cagacgaag 
caacggtta ttaagacgc cagaaatca acatcagag 
atcgaaact cgaattcaa gacgtcacc gccgaagac 
gaaaagagt ccggaagtg gatcaaata taccaagtg 
ttgaagcaa gctaccgaa atatcaaat agcaagcca 
cgcgttaat gtagagccg gctccaccc ggtataacg 
gtggacaga accgtcact tcgaatccg ggaagttcg 
ggcagttca ggacaaagt cttaatcgg agaccgggt 
cctccgata cagcctcct agggctgcc ggctccaac 
ttagccgtt gtcaatcct gctccttgc tccactagc 
tcaggtttg tcacgacta gaggactta aaggacgcg 
tttacgacg attttaggc taa
    • >TC034277 RB
      atgtatgtg atatctccg gcagatgaa gtagtctat 
ctgtcatat ggtcgagtc atatacatc ccttcgtcc 
ctgcccaca aaccgtgtg accaaaccg attagaacc 
tccctgtcg accggaagt cacacgtct tatcccagt 
gtcccctca acgagtacc agttcaaca aagagccga 
caatcaact gccagcgaa ccagtcttt agccttaac 
aaactaaaa ccaaccagt tcgtcgaaa tccctaaac 
caaccctct accagccgt gaaaagtcc ccaaacgaa 
ccacccccg gtcagaccg tcgagaaag aaaaaactc 
aaagtcgcc cttgaatca gcacggaaa cagtcattt 
tcggatttc ctctcaatc agtcgcgaa aaatcaccc 
aaaacccca gtcaaccaa acgccggaa aaatcgccg 
accattcga ctgttccga ggaaaatca gtcagtccc 
aaaaaccta ggaagaaac agaacagca gtagatttc 
gattccctt tttatccgc gaagccagt ccgggaaag 
ctctccgtc aaaagtttg aataacgtt gacgagacc 
ggtcctagg ctgaccgga aaacagcga ctgacccca 
gaaaagtcg tcgcccacc aagaaaaga acgttcttt 
ggaagcgtt cgcgttaag agaatccct gaagtcatc 
gagaagatg gcgggttac gaatcggcc ttgaaagaa 
ctgacacat gcaggatac aacgaacac ctcaaatcc 
cacaactcg gtcgcgttt aaattggtg cgaaccgta 
tcggatttc acacaacag ctgggtcag atgtacgaa 
cagcatgcc gaagaatta caaatgttg gtcgcaaac 
tttcgaaaa cgaaacggc gaacttagg aaagaaaga 
cctgcgtgc ccgagttcg ttgtttcac acctgggag 
acgctgctt caagaggtg gaaattgat tctcaggcc 
ctcggcgag atcgcgtcg atcttaggg aggcaagta 
tcacggccg cttctggag aggtccttc cacaggaag 
atacagtct aggaaagtg ttcacacaa agggagagc 
tatgagacg atcattgcc aaaactgaa gagaagttg 
gttaagtgt cggcaagaa tataagaat gcctactta 
gcgtacctt tcgaatccc acaacggag agcctgagc 
tcctatttc aacagccac aacacttac gtccaacaa 
ctccacgcg acaaacggg atgttggaa gagtacgga 
aaggatact ttaccatca cttttacag gaattagag 
gagatctac agtgatttg tgcgcggcg gtttctgag 
gctgtcgct caaggggca gaagtggtc tcttcgagg 
gcgaaggag caatgcaag aggtatgac ggtttagtt 
tcccaatgc aaatccatc tcgtcgtca tcggatttg 
gcccactta gcgcgatct ctgcccacc cccacgggc 
agggccccc attcttaag agaccattc gttccacct 
caaccgccc ccacctccg gatcccgta gacggcgaa 
ccgcaagac atgcaaaac ctccaggat aacatcccc 
ccgcctctc aaggacgaa ctagtaata gacagacta 
tcggcgctc caagtgaag ccttcccac gatgttttg 
aaaaaggaa gcggctgat ttagaggcg caaatcaga 
caaatccaa gacgctcta gaaacgttg ctgaggatt 
cagcaacga tcggttgaa gcggcactt tataacaaa 
gccaacgaa ctccaagag gatatttcg atgaagcga 
ttcgatcta agggtggct cagatccat cttagcgcg 
atcaacgct cagaaagag ctttttacg agcaaactg 
gagggagat acaggtcgt gaaagaaaa atgtcttca 
gcgtcgacg gcaagcatg aaaaataaa tggttgaaa 
gcttttaag agtttaaaa actccaccg ccagaaaac 
acagagaag aaaaatggt tcggctgcc acgagagag 
ctcctaaaa ggtgatcca gacgctcac aatttccaa 
gagtataca tacaagaaa attacaccc tgcgacgta 
tgctcgcaa gtattgaga gggcacaca agacagggt 
ctgaaatgt agaatatgc aaaatgaac gttcatctc 
gactgtcag gacaaagcg tccaaatgt cagacgaag 
caacggtta ttaagacgc cagaaatca acatcagag 
atcgaaact cgaattcaa gacgtcacc gccgaagac 
gaaaaaaaa aatgaaatg tattcaggg atgcccaca 
attaacaga catttgtcg gtcagggat aacaacaga 
ttgtacccg cctcccaat gctgtcata gagagtccg 
gaagtggat caaatatac caagtgttg aagcaagct 
accgaaata tcaaatagc aagccacgc gttaatgta 
gagccggct ccacccggt ataacggtg gacagaacc 
gtcacttcg aatccggga agttcgggc agttcagga 
caaagtctt aatcggaga ccgggtcct ccgatacag 
cctcctagg gctgccggc tccaactta gccgttgtc 
aatcctgct ccttgctcc actagctca ggtttgtca 
cgactagag gacttaaag gacgcgttt acgacgatt 
ttaggctaa
    mRNA sequence
    • >TC034277 RA
      agtagtcag tatagctcc ggcagcgga cggaaataa 
ccgcgtcct gggcgtcgc gacgcccgc gctcgtgtc 
gaacacagt gtgtgatag tatgagtgc gcgatgcct 
taggttgag gcagccaag caaagagtg agttctgaa 
aaatagagt aaaaattca aactgtggg acagtgttt 
tggtgcgtc cgtaagcaa ttctgacac ccctgttgt 
cgcttgaga cacattaat gttggaaac ggtgctggg 
ggtgctgct gtgggcagt ttcgcaatg tgggatcca 
atgggagca tgtatgtga tatctccgg cagatgaag 
tagtctatc tgtcatatg gtcgagtca tatacatcc 
cttcgtccc tgcccacaa accgtgtga ccaaaccga 
ttagaacct ccctgtcga ccggaagtc acacgtctt 
atcccagtg tcccctcaa cgagtacca gttcaacaa 
agagccgac aatcaactg ccagcgaac cagtcttta 
gccttaaca aactaaaac caaccagtt cgtcgaaat 
ccctaaacc aaccctcta ccagccgtg aaaagtccc 
caaacgaac cacccccgg tcagaccgt cgagaaaga 
aaaaactca aagtcgccc ttgaatcag cacggaaac 
agtcatttt cggatttcc tctcaatca gtcgcgaaa 
aatcaccca aaaccccag tcaaccaaa cgccggaaa 
aatcgccga ccattcgac tgttccgag gaaaatcag 
tcagtccca aaaacctag gaagaaaca gaacagcag 
tagatttcg attcccttt ttatccgcg aagccagtc 
cgggaaagc tctccgtca aaagtttga ataacgttg 
acgagaccg gtcctaggc tgaccggaa aacagcgac 
tgaccccag aaaagtcgt cgcccacca agaaaagaa 
cgttctttg gaagcgttc gcgttaaga gaatccctg 
aagtcatcg agaagatgg cgggttacg aatcggcct 
tgaaagaac tgacacatg caggataca acgaacacc 
tcaaatccc acaactcgg tcgcgttta aattggtgc 
gaaccgtat cggatttca cacaacagc tgggtcaga 
tgtacgaac agcatgccg aagaattac aaatgttgg 
tcgcaaact ttcgaaaac gaaacggcg aacttagga 
aagaaagac ctgcgtgcc cgagttcgt tgtttcaca 
cctgggaga cgctgcttc aagaggtgg aaattgatt 
ctcaggccc tcggcgaga tcgcgtcga tcttaggga 
ggcaagtat cacggccgc ttctggaga ggtccttcc 
acaggaaga tacagtcta ggaaagtgt tcacacaaa 
gggagagct atgagacga tcattgcca aaactgaag 
agaagttgg ttaagtgtc ggcaagaat ataagaatg 
cctacttag cgtaccttt cgaatccca caacggaga 
gcctgagct cctatttca acagccaca acacttacg 
tccaacaac tccacgcga caaacggga tgttggaag 
agtacggaa aggatactt taccatcac ttttacagg 
aattagagg agatctaca gtgatttgt gcgcggcgg 
tttctgagg ctgtcgctc aaggggcag aagtggtct 
cttcgaggg cgaaggagc aatgcaaga ggtatgacg 
gtttagttt cccaatgca aatccatct cgtcgtcat 
cggatttgg cccacttag cgcgatctc tgcccaccc 
ccacgggca gggccccca ttcttaaga gaccattcg 
ttccacctc aaccgcccc cacctccgg atcccgtag 
acggcgaac cgcaagaca tgcaaaacc tccaggata 
acatccccc cgcctctca aggacgaac tagtaatag 
acagactat cggcgctcc aagtgaagc cttcccacg 
atgttttga aaaaggaag cggctgatt tagaggcgc 
aaatcagac aaatccaag acgctctag aaacgttgc 
tgaggattc agcaacgat cggttgaag cggcacttt 
ataacaaag ccaacgaac tccaagagg atatttcga 
tgaagcgat tcgatctaa gggtggctc agatccatc 
ttagcgcga tcaacgctc agaaagagc tttttacga 
gcaaactgg agggagata caggtcgtg aaagaaaaa 
tgtcttcag cgtcgacgg caagcatga aaaataaat 
ggttgaaag cttttaaga gtttaaaaa ctccaccgc 
cagaaaaca cagagaaga aaaatggtt cggctgcca 
cgagagagc tcctaaaag gtgatccag acgctcaca 
atttccaag agtatacat acaagaaaa ttacaccct 
gcgacgtat gctcgcaag tattgagag ggcacacaa 
gacagggtc tgaaatgta gaatatgca aaatgaacg 
ttcatctcg actgtcagg acaaagcgt ccaaatgtc 
agacgaagc aacggttat taagacgcc agaaatcaa 
catcagaga tcgaaactc gaattcaag acgtcaccg 
ccgaagacg aaaagagtc cggaagtgg atcaaatat 
accaagtgt tgaagcaag ctaccgaaa tatcaaata 
gcaagccac gcgttaatg tagagccgg ctccacccg 
gtataacgg tggacagaa ccgtcactt cgaatccgg 
gaagttcgg gcagttcag gacaaagtc ttaatcgga 
gaccgggtc ctccgatac agcctccta gggctgccg 
gctccaact tagccgttg tcaatcctg ctccttgct 
ccactagct caggtttgt cacgactag aggacttaa 
aggacgcgt ttacgacga ttttaggct aattatgca 
tgcactcta tccagttat tttccggtc ccgatttcc 
cgatctggg gggtttaca cacttttta gcacgatct 
tgcacgaag agcgaaatt ttcttgata taagcacgg 
gcgtgttta ctgattaat tacgtgaaa tatgatagg 
gaattttta tcatcatta cgaggataa caatgctgt 
ctttcccat aaaacttgt ggtgtgatt taccaaaaa 
tactttaac gaactgttc tgtattcta tagttttta 
acaataaat aaatagatt taacagat
    • >TC034277 RB
      agtagtcag tatagctcc ggcagcgga cggaaataa 
ccgcgtcct gggcgtcgc gacgcccgc gctcgtgtc 
gaacacagt gtgtgatag tatgagtgc gcgatgcct 
taggttgag gcagccaag caaagagtg agttctgaa 
aaatagagt aaaaattca aactgtggg acagtgttt 
tggtgcgtc cgtaagcaa ttctgacac ccctgttgt 
cgcttgaga cacattaat gttggaaac ggtgctggg 
ggtgctgct gtgggcagt ttcgcaatg tgggatcca 
atgggagca tgtatgtga tatctccgg cagatgaag 
tagtctatc tgtcatatg gtcgagtca tatacatcc 
cttcgtccc tgcccacaa accgtgtga ccaaaccga 
ttagaacct ccctgtcga ccggaagtc acacgtctt 
atcccagtg tcccctcaa cgagtacca gttcaacaa 
agagccgac aatcaactg ccagcgaac cagtcttta 
gccttaaca aactaaaac caaccagtt cgtcgaaat 
ccctaaacc aaccctcta ccagccgtg aaaagtccc 
caaacgaac cacccccgg tcagaccgt cgagaaaga 
aaaaactca aagtcgccc ttgaatcag cacggaaac 
agtcatttt cggatttcc tctcaatca gtcgcgaaa 
aatcaccca aaaccccag tcaaccaaa cgccggaaa 
aatcgccga ccattcgac tgttccgag gaaaatcag 
tcagtccca aaaacctag gaagaaaca gaacagcag 
tagatttcg attcccttt ttatccgcg aagccagtc 
cgggaaagc tctccgtca aaagtttga ataacgttg 
acgagaccg gtcctaggc tgaccggaa aacagcgac 
tgaccccag aaaagtcgt cgcccacca agaaaagaa 
cgttctttg gaagcgttc gcgttaaga gaatccctg 
aagtcatcg agaagatgg cgggttacg aatcggcct 
tgaaagaac tgacacatg caggataca acgaacacc 
tcaaatccc acaactcgg tcgcgttta aattggtgc 
gaaccgtat cggatttca cacaacagc tgggtcaga 
tgtacgaac agcatgccg aagaattac aaatgttgg 
tcgcaaact ttcgaaaac gaaacggcg aacttagga 
aagaaagac ctgcgtgcc cgagttcgt tgtttcaca 
cctgggaga cgctgcttc aagaggtgg aaattgatt 
ctcaggccc tcggcgaga tcgcgtcga tcttaggga 
ggcaagtat cacggccgc ttctggaga ggtccttcc 
acaggaaga tacagtcta ggaaagtgt tcacacaaa 
gggagagct atgagacga tcattgcca aaactgaag 
agaagttgg ttaagtgtc ggcaagaat ataagaatg 
cctacttag cgtaccttt cgaatccca caacggaga 
gcctgagct cctatttca acagccaca acacttacg 
tccaacaac tccacgcga caaacggga tgttggaag 
agtacggaa aggatactt taccatcac ttttacagg 
aattagagg agatctaca gtgatttgt gcgcggcgg 
tttctgagg ctgtcgctc aaggggcag aagtggtct 
cttcgaggg cgaaggagc aatgcaaga ggtatgacg 
gtttagttt cccaatgca aatccatct cgtcgtcat 
cggatttgg cccacttag cgcgatctc tgcccaccc 
ccacgggca gggccccca ttcttaaga gaccattcg 
ttccacctc aaccgcccc cacctccgg atcccgtag 
acggcgaac cgcaagaca tgcaaaacc tccaggata 
acatccccc cgcctctca aggacgaac tagtaatag 
acagactat cggcgctcc aagtgaagc cttcccacg 
atgttttga aaaaggaag cggctgatt tagaggcgc 
aaatcagac aaatccaag acgctctag aaacgttgc 
tgaggattc agcaacgat cggttgaag cggcacttt 
ataacaaag ccaacgaac tccaagagg atatttcga 
tgaagcgat tcgatctaa gggtggctc agatccatc 
ttagcgcga tcaacgctc agaaagagc tttttacga 
gcaaactgg agggagata caggtcgtg aaagaaaaa 
tgtcttcag cgtcgacgg caagcatga aaaataaat 
ggttgaaag cttttaaga gtttaaaaa ctccaccgc 
cagaaaaca cagagaaga aaaatggtt cggctgcca 
cgagagagc tcctaaaag gtgatccag acgctcaca 
atttccaag agtatacat acaagaaaa ttacaccct 
gcgacgtat gctcgcaag tattgagag ggcacacaa 
gacagggtc tgaaatgta gaatatgca aaatgaacg 
ttcatctcg actgtcagg acaaagcgt ccaaatgtc 
agacgaagc aacggttat taagacgcc agaaatcaa 
catcagaga tcgaaactc gaattcaag acgtcaccg 
ccgaagacg aaaaaaaaa atgaaatgt attcaggga 
tgcccacaa ttaacagac atttgtcgg tcagggata 
acaacagat tgtacccgc ctcccaatg ctgtcatag 
agagtccgg aagtggatc aaatatacc aagtgttga 
agcaagcta ccgaaatat caaatagca agccacgcg 
ttaatgtag agccggctc cacccggta taacggtgg 
acagaaccg tcacttcga atccgggaa gttcgggca 
gttcaggac aaagtctta atcggagac cgggtcctc 
cgatacagc ctcctaggg ctgccggct ccaacttag 
ccgttgtca atcctgctc cttgctcca ctagctcag 
gtttgtcac gactagagg acttaaagg acgcgttta 
cgacgattt taggctaat tatgcatgc actctatcc 
agttatttt ccggtcccg atttcccga tctgggggg 
tttacacac tttttagca cgatcttgc acgaagagc 
gaaattttc ttgatataa gcacgggcg tgtttactg 
attaattac gtgaaatat gatagggaa tttttatca 
tcattacga ggataacaa tgctgtctt tcccataaa 
acttgtggt gtgatttac caaaaatac tttaacgaa 
ctgttctgt attctatag tttttaaca ataaataaa 
tagatttaa cagat

    If you use iBeetle-Base, please cite: Dönitz J et al.: Expanded and updated data and a query pipeline for iBeetle-Base,
    Nucleic Acids Res. 2018 Jan 4;46(D1):D831-D835. doi: 10.1093/nar/gkx984.

    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY