Status
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Gene information
General information
TC006436 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007423.3: 9273325..9280610
Sequence information
Transcripts / Proteins (3) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC006436
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
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    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
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    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
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    Publish name
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    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_04142

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 20.0% (includes death as pupa, adult)

    adult lethality - Number of animals showing the phenotype: 2 (11 dpi)
    Days post injection


    Analysis of embryonic musculature and early development
    number of eggs/embryos/larvae on slide: > 50 embryo/egg not developed/not fertilized - Penetrance (percentage of animals/eggs on slide): 50% - 80%
    embryo/egg with embryonic tissue, no cuticle, no fluorescence - Penetrance (percentage of animals/eggs on slide): less than 30%

    affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): 50% - 80%
    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: > 50
    embryo/egg without visible larval cuticle in cuticle preparation - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    cuticle remnants without visible segmentation, differentiation or axis - Penetrance (percentage of animals/eggs on slide): less than 30%

    larva appendages shortened - Penetrance (percentage of animals/eggs on slide): less than 30%

    affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): 50% - 80%
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 0.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 0.0% (includes death as larva, prepupa, pupa, adult)

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC006436 RA
      MFALSTLES VINQQWANT DWPFREELK NTLYNYLIE 
      KGNSAPHFI RSKYAKLLV IIAKQDWPS QYPNFFINI 
      IELLKSEPN QLIGLILLK TTSEELMGL QASFENGRK 
      DEITRLLHQ YIPVVFDSL NTILENLGT KPRHTATAT 
      PPPSPTHPT SAPSLPQQL ATATFKPDS KALNKEALE 
      TVQHLFTWV QINQIPPSI IKAIFHFTN ISSYAQDDH 
      DMCVLAMST INELLYRKC TPPGSQEFF TQLYYYTIE 
      LLRDITNSR LDTLDPIFV EKMSELLTL LVEQHLWRL 
      EAEPRFSAL DFLSLLYQL TVQLPSMQC YLRCLNVWA 
      AFFKQTKSQ KNHKYLEAF LALLTALLQ KIQFSTNAS 
      QLKEIDNVD TNDDNETDW QIFLKTSIE IVSMVAEYA 
      PLETLNLIL MPWKTCYDI YRRIETIVD HQNCSLNCE 
      LSESERLSY IITDFSSLT QTLARLSPL FFDQENEEI 
      TNVSSPMIN NLIEKLLES ASLATSVRL YNLKTNNSH 
      LTDCFIDNH SQLLAALKT YLIWITRND KVAIENLKL 
      IVDITLPVI HTSVPLKIS NSSAHLFLA LSNLPCSPN 
      LILLPDVSH FINAAPNFK FRDIETNFV TCSAITNLL 
      LKPWPDCSQ ENANHRSAL TGVFFDGLT WPFRDLTLS 
      NDEQRVRQV TEDVLPIVS HIVDFCKDF PIASKRRLF 
      LAIKTTIEQ SIVLFPAFA KNSEISNCI LVVFLNVLR 
      VLQQQLGVE GTKNAVQVF LEVAVKEQG AGNFLDKLL 
      QIFQLVVEA PGSGYKNFL PGILQLCMD NVYPFILSH 
      GAEKTDAFM SLLTLLHSI LLHRWQYFY SSQVRLGYS 
      PVYTETEND APEPVQLMA VLQVFGQAL LQQDINIFK 
      LSLASLEDL NAKWKLYLN VLFRYNGLS KYLSVLLQT 
      LIDKSQSLL SEDIQVAIY NMAAVNFDH FFSTFLPDF 
      IRNIDAITD QQREILLTN FMQNHDKDM PTFVQHLRI 
      FVNDAQHFK LCSLS
    • >TC006436 RB
      MCVLAMSTI NELLYRKCT PPGSQEFFT QLYYYTIEL 
      LRDITNSRL DTLDPIFVE KMSELLTLL VEQHLWRLE 
      AEPRFSALD FLSLLYQLT VQLPSMQCY LRCLNVWAA 
      FFKQTKSQK NHKYLEAFL ALLTALLQK IQFSTNASQ 
      LKEIDNVDT NDDNETDWQ IFLKTSIEI VSMVAEYAP 
      LETLNLILM PWKTCYDIY RRIETIVDH QNCSLNCEL 
      SESERLSYI ITDFSSLTQ TLARLSPLF FDQENEEIT 
      NVSSPMINN LIEKLLESA SLATSVRLY NLKTNNSHL 
      TDCFIDNHS QLLAALKTY LIWITRNDK VAIENLKLI 
      VDITLPVIH TSVPLKISN SSAHLFLAL SNLPCSPNL 
      ILLPDVSHF INAAPNFKF RDIETNFVT CSAITNLLL 
      KPWPDCSQE NANHRSALT GVFFDGLTW PFRDLTLSN 
      DEQRVRQVT EDVLPIVSH IVDFCKDFP IASKRRLFL 
      AIKTTIEQS IVLFPAFAK NSEISNCIL VVFLNVLRV 
      LQQQLGVEG TKNAVQVFL EVAVKEQGA GNFLDKLLQ 
      IFQLVVEAP GSGYKNFLP GILQLCMDN VYPFILSHG 
      AEKTDAFMS LLTLLHSIL LHRWQYFYS SQVRLGYSP 
      VYTETENDA PEPVQLMAV LQVFGQALL QQDINIFKL 
      SLASLEDLN AKWKLYLNV LFRYNGLSK YLSVLLQTL 
      IDKSQSLLS EDIQVAIYN MAAVNFDHF FSTFLPDFI 
      RNIDAITDQ QREILLTNF MQNHDKDMP TFVQHLRIF 
      VNDAQHFKL CSLS
    • >TC006436 RC
      MFALSTLES VINQQWANT DWPFREELK NTLYNYLIE 
      KGNSAPHFI RSKYAKLLV IIAKQDWPS QYPNFFINI 
      IELLKSEPN QLIGLILLK TTSEELMGL QASFENGRK 
      DEITRLLHQ YIPVVFDSL NTILENLGT KPRHTATAT 
      PPPSPTHPT SAPSLPQQL ATATFKPDS KALNKEALE 
      TVQHLFTWV QINQIPPSI IKAIFHFTN ISSYAQVSI 
      KTRYGSTGF YLF
    CDS sequence
    • >TC006436 RA
      atgtttgcc ttatcgaca ttagagtct gtgattaat 
      caacagtgg gcaaatact gattggcct tttcgagaa 
      gagttaaaa aacacactg tacaattat ttaatagag 
      aaaggaaac agcgcaccc cattttata aggagcaaa 
      tatgccaaa ttgctcgta attatagca aaacaagac 
      tggccatcg cagtacccg aattttttt attaacatt 
      attgagttg ttgaaatcc gaaccaaat caactgatt 
      ggtttaatt ttactgaaa acgacaagc gaggagttg 
      atggggctc caagcctcg tttgagaat ggtagaaaa 
      gacgaaatt acaagactg cttcatcag tacattcct 
      gtggttttc gattcacta aacacgatt ctcgaaaat 
      ttaggcact aaacctaga cacaccgct acagcgacc 
      ccgcccccg tccccaacc caccccacg tccgctccc 
      agcctcccc cagcaactg gccactgcg accttcaag 
      cccgacagc aaagccctg aataaggaa gccctggag 
      acagtgcaa cacctcttt acttgggtg caaatcaac 
      caaattccc ccgtcgatc attaaagcc atttttcac 
      ttcaccaac atatccagc tatgctcaa gacgaccac 
      gacatgtgc gtgttggca atgtcgaca atcaacgaa 
      ctcctctac cgaaaatgc actcctccg ggcagccag 
      gaatttttt acccagctt tattactac acaattgaa 
      ttattacgc gatataacg aacagtcga ctcgacact 
      ttggacccg attttcgtc gaaaaaatg tccgaatta 
      ttaacccta ctagtcgaa cagcacttg tggcggctt 
      gaggccgaa cctcgtttc tcagctttg gatttttta 
      tcactgctt taccaacta actgtccaa ctgccatca 
      atgcaatgc tatctcaga tgtctcaat gtgtgggcg 
      gcttttttc aaacaaacc aaatcgcag aaaaaccac 
      aagtacttg gaggctttt ctcgccttg cttacggca 
      cttttgcaa aaaatacag ttctcgacg aacgctagt 
      cagcttaaa gaaattgat aatgtggac acgaacgat 
      gataacgaa acggattgg cagattttt ttgaaaact 
      tcgattgaa atcgtgtca atggttgcg gagtatgcg 
      cctcttgaa accctcaat cttattcta atgccgtgg 
      aaaacatgc tatgatatt taccggcgg attgagaca 
      attgtcgac caccaaaac tgttcctta aattgtgaa 
      ttatcagag agcgaaaga ctgtcttac atcatcacc 
      gatttttca tccctaact cagactcta gctaggtta 
      tctcctcta ttcttcgat caagaaaat gaggaaatc 
      accaacgtc tcatcaccc atgattaat aatttaatc 
      gagaaactc ctggaaagt gcctcactt gcaacttcc 
      gtcagactt tataatctt aaaacgaac aactcgcat 
      ctgactgat tgtttcatt gataaccac agccaactg 
      ctcgccgcg ctgaaaacc tacctaatt tggataacc 
      cgcaacgac aaggtggca atcgaaaac ctcaaacta 
      atagtcgac atcaccctc ccagtcatc cacacttcc 
      gttccgcta aaaatcagc aattcatcg gcacacctt 
      ttcctcgcc ctctcgaat ctcccgtgc tctcctaat 
      ttaatcctc ttgcccgac gtgtctcac ttcataaat 
      gcggctcct aatttcaaa ttcagagac atcgaaacg 
      aattttgtc acctgcagt gccattacg aacttattg 
      ttgaaaccg tggcctgat tgttcgcaa gagaacgcc 
      aaccatcgg agcgccctc acgggggtt ttcttcgac 
      ggcttgacc tggcctttc cgagacttg acgctgtca 
      aacgacgaa caacgagtg cggcaagtg acggaggac 
      gtcctcccg atcgtctct cacatcgtt gatttctgc 
      aaagacttt ccaatcgcc tcaaaacgg cgacttttc 
      ctagcgatt aaaaccaca atcgagcaa tcgatcgtt 
      ctattccca gcgtttgcg aaaaactcc gagattagt 
      aactgtatt ttagttgtt tttctgaac gttctgagg 
      gttttgcaa caacagttg ggcgtggaa gggacgaaa 
      aatgccgtt caggtgttc ctagaagtt gcggttaag 
      gagcaagga gcagggaat tttcttgat aagttgcta 
      caaattttc cagctagta gtggaagcc cccggttca 
      gggtacaaa aattttttg ccggggatt ctccaactg 
      tgtatggac aacgtctat ccttttatt ttgtcgcac 
      ggggcggaa aaaaccgac gctttcatg tcccttttg 
      actcttctg cacagcatc ttgctccac agatggcag 
      tacttctac agttcgcag gttaggttg ggttactcg 
      ccggtttac accgaaacc gagaacgac gcccccgag 
      cctgtgcaa ctaatggct gtgctgcaa gtattcggc 
      caagcgctg cttcagcaa gatataaat atttttaag 
      ctgagttta gcctctttg gaagatctc aatgccaaa 
      tggaaattg tatttgaat gttttgttt cggtacaac 
      ggcctgtcg aagtacttg tcggtgttg ctgcaaact 
      ttaatcgat aagtctcag agtttgtta tctgaggac 
      atacaagtc gccatttat aacatggcc gctgttaat 
      ttcgaccac tttttttcg acattcctt ccggatttt 
      atcagaaat attgacgct attacggat caacagagg 
      gagatttta ttgacaaat tttatgcaa aaccatgat 
      aaggacatg cccacgttt gtgcagcat ttgcggatt 
      ttcgtgaac gacgcccaa catttcaaa ttgtgcagt 
      ttgtcctaa
    • >TC006436 RB
      atgtgcgtg ttggcaatg tcgacaatc aacgaactc 
      ctctaccga aaatgcact cctccgggc agccaggaa 
      ttttttacc cagctttat tactacaca attgaatta 
      ttacgcgat ataacgaac agtcgactc gacactttg 
      gacccgatt ttcgtcgaa aaaatgtcc gaattatta 
      accctacta gtcgaacag cacttgtgg cggcttgag 
      gccgaacct cgtttctca gctttggat tttttatca 
      ctgctttac caactaact gtccaactg ccatcaatg 
      caatgctat ctcagatgt ctcaatgtg tgggcggct 
      tttttcaaa caaaccaaa tcgcagaaa aaccacaag 
      tacttggag gcttttctc gccttgctt acggcactt 
      ttgcaaaaa atacagttc tcgacgaac gctagtcag 
      cttaaagaa attgataat gtggacacg aacgatgat 
      aacgaaacg gattggcag atttttttg aaaacttcg 
      attgaaatc gtgtcaatg gttgcggag tatgcgcct 
      cttgaaacc ctcaatctt attctaatg ccgtggaaa 
      acatgctat gatatttac cggcggatt gagacaatt 
      gtcgaccac caaaactgt tccttaaat tgtgaatta 
      tcagagagc gaaagactg tcttacatc atcaccgat 
      ttttcatcc ctaactcag actctagct aggttatct 
      cctctattc ttcgatcaa gaaaatgag gaaatcacc 
      aacgtctca tcacccatg attaataat ttaatcgag 
      aaactcctg gaaagtgcc tcacttgca acttccgtc 
      agactttat aatcttaaa acgaacaac tcgcatctg 
      actgattgt ttcattgat aaccacagc caactgctc 
      gccgcgctg aaaacctac ctaatttgg ataacccgc 
      aacgacaag gtggcaatc gaaaacctc aaactaata 
      gtcgacatc accctccca gtcatccac acttccgtt 
      ccgctaaaa atcagcaat tcatcggca caccttttc 
      ctcgccctc tcgaatctc ccgtgctct cctaattta 
      atcctcttg cccgacgtg tctcacttc ataaatgcg 
      gctcctaat ttcaaattc agagacatc gaaacgaat 
      tttgtcacc tgcagtgcc attacgaac ttattgttg 
      aaaccgtgg cctgattgt tcgcaagag aacgccaac 
      catcggagc gccctcacg ggggttttc ttcgacggc 
      ttgacctgg cctttccga gacttgacg ctgtcaaac 
      gacgaacaa cgagtgcgg caagtgacg gaggacgtc 
      ctcccgatc gtctctcac atcgttgat ttctgcaaa 
      gactttcca atcgcctca aaacggcga cttttccta 
      gcgattaaa accacaatc gagcaatcg atcgttcta 
      ttcccagcg tttgcgaaa aactccgag attagtaac 
      tgtatttta gttgttttt ctgaacgtt ctgagggtt 
      ttgcaacaa cagttgggc gtggaaggg acgaaaaat 
      gccgttcag gtgttccta gaagttgcg gttaaggag 
      caaggagca gggaatttt cttgataag ttgctacaa 
      attttccag ctagtagtg gaagccccc ggttcaggg 
      tacaaaaat tttttgccg gggattctc caactgtgt 
      atggacaac gtctatcct tttattttg tcgcacggg 
      gcggaaaaa accgacgct ttcatgtcc cttttgact 
      cttctgcac agcatcttg ctccacaga tggcagtac 
      ttctacagt tcgcaggtt aggttgggt tactcgccg 
      gtttacacc gaaaccgag aacgacgcc cccgagcct 
      gtgcaacta atggctgtg ctgcaagta ttcggccaa 
      gcgctgctt cagcaagat ataaatatt tttaagctg 
      agtttagcc tctttggaa gatctcaat gccaaatgg 
      aaattgtat ttgaatgtt ttgtttcgg tacaacggc 
      ctgtcgaag tacttgtcg gtgttgctg caaacttta 
      atcgataag tctcagagt ttgttatct gaggacata 
      caagtcgcc atttataac atggccgct gttaatttc 
      gaccacttt ttttcgaca ttccttccg gattttatc 
      agaaatatt gacgctatt acggatcaa cagagggag 
      attttattg acaaatttt atgcaaaac catgataag 
      gacatgccc acgtttgtg cagcatttg cggattttc 
      gtgaacgac gcccaacat ttcaaattg tgcagtttg 
      tcctaa
    • >TC006436 RC
      atgtttgcc ttatcgaca ttagagtct gtgattaat 
      caacagtgg gcaaatact gattggcct tttcgagaa 
      gagttaaaa aacacactg tacaattat ttaatagag 
      aaaggaaac agcgcaccc cattttata aggagcaaa 
      tatgccaaa ttgctcgta attatagca aaacaagac 
      tggccatcg cagtacccg aattttttt attaacatt 
      attgagttg ttgaaatcc gaaccaaat caactgatt 
      ggtttaatt ttactgaaa acgacaagc gaggagttg 
      atggggctc caagcctcg tttgagaat ggtagaaaa 
      gacgaaatt acaagactg cttcatcag tacattcct 
      gtggttttc gattcacta aacacgatt ctcgaaaat 
      ttaggcact aaacctaga cacaccgct acagcgacc 
      ccgcccccg tccccaacc caccccacg tccgctccc 
      agcctcccc cagcaactg gccactgcg accttcaag 
      cccgacagc aaagccctg aataaggaa gccctggag 
      acagtgcaa cacctcttt acttgggtg caaatcaac 
      caaattccc ccgtcgatc attaaagcc atttttcac 
      ttcaccaac atatccagc tatgctcaa gtgagtata 
      aaaacgcga tacggatca actggtttt tatttgttt 
      tga
    mRNA sequence
    • >TC006436 RA
      gacgtcaga aacgtcaaa atgttgata atttcgtaa 
      agttaaata acgttattt actaataat taacatcgt 
      tgcatcaat gtcatgcat ttgttgata tagcagaca 
      taaaaaatg gaacgtaac gagaatgaa tccttggtt 
      gcgttggag tacctactg gatgaattt tttaacccg 
      gtcacaagc aattcacga aaacatgaa attgaacag 
      cagctcagt tcatttaaa tacctaccc caatcacgg 
      aaactgtgt ttgtacttt cttacaaat acctctagt 
      caatatgtg actatgttt gccttatcg acattagag 
      tctgtgatt aatcaacag tgggcaaat actgattgg 
      ccttttcga gaagagtta aaaaacaca ctgtacaat 
      tatttaata gagaaagga aacagcgca ccccatttt 
      ataaggagc aaatatgcc aaattgctc gtaattata 
      gcaaaacaa gactggcca tcgcagtac ccgaatttt 
      tttattaac attattgag ttgttgaaa tccgaacca 
      aatcaactg attggttta attttactg aaaacgaca 
      agcgaggag ttgatgggg ctccaagcc tcgtttgag 
      aatggtaga aaagacgaa attacaaga ctgcttcat 
      cagtacatt cctgtggtt ttcgattca ctaaacacg 
      attctcgaa aatttaggc actaaacct agacacacc 
      gctacagcg accccgccc ccgtcccca acccacccc 
      acgtccgct cccagcctc ccccagcaa ctggccact 
      gcgaccttc aagcccgac agcaaagcc ctgaataag 
      gaagccctg gagacagtg caacacctc tttacttgg 
      gtgcaaatc aaccaaatt cccccgtcg atcattaaa 
      gccattttt cacttcacc aacatatcc agctatgct 
      caagacgac cacgacatg tgcgtgttg gcaatgtcg 
      acaatcaac gaactcctc taccgaaaa tgcactcct 
      ccgggcagc caggaattt tttacccag ctttattac 
      tacacaatt gaattatta cgcgatata acgaacagt 
      cgactcgac actttggac ccgattttc gtcgaaaaa 
      atgtccgaa ttattaacc ctactagtc gaacagcac 
      ttgtggcgg cttgaggcc gaacctcgt ttctcagct 
      ttggatttt ttatcactg ctttaccaa ctaactgtc 
      caactgcca tcaatgcaa tgctatctc agatgtctc 
      aatgtgtgg gcggctttt ttcaaacaa accaaatcg 
      cagaaaaac cacaagtac ttggaggct tttctcgcc 
      ttgcttacg gcacttttg caaaaaata cagttctcg 
      acgaacgct agtcagctt aaagaaatt gataatgtg 
      gacacgaac gatgataac gaaacggat tggcagatt 
      tttttgaaa acttcgatt gaaatcgtg tcaatggtt 
      gcggagtat gcgcctctt gaaaccctc aatcttatt 
      ctaatgccg tggaaaaca tgctatgat atttaccgg 
      cggattgag acaattgtc gaccaccaa aactgttcc 
      ttaaattgt gaattatca gagagcgaa agactgtct 
      tacatcatc accgatttt tcatcccta actcagact 
      ctagctagg ttatctcct ctattcttc gatcaagaa 
      aatgaggaa atcaccaac gtctcatca cccatgatt 
      aataattta atcgagaaa ctcctggaa agtgcctca 
      cttgcaact tccgtcaga ctttataat cttaaaacg 
      aacaactcg catctgact gattgtttc attgataac 
      cacagccaa ctgctcgcc gcgctgaaa acctaccta 
      atttggata acccgcaac gacaaggtg gcaatcgaa 
      aacctcaaa ctaatagtc gacatcacc ctcccagtc 
      atccacact tccgttccg ctaaaaatc agcaattca 
      tcggcacac cttttcctc gccctctcg aatctcccg 
      tgctctcct aatttaatc ctcttgccc gacgtgtct 
      cacttcata aatgcggct cctaatttc aaattcaga 
      gacatcgaa acgaatttt gtcacctgc agtgccatt 
      acgaactta ttgttgaaa ccgtggcct gattgttcg 
      caagagaac gccaaccat cggagcgcc ctcacgggg 
      gttttcttc gacggcttg acctggcct ttccgagac 
      ttgacgctg tcaaacgac gaacaacga gtgcggcaa 
      gtgacggag gacgtcctc ccgatcgtc tctcacatc 
      gttgatttc tgcaaagac tttccaatc gcctcaaaa 
      cggcgactt ttcctagcg attaaaacc acaatcgag 
      caatcgatc gttctattc ccagcgttt gcgaaaaac 
      tccgagatt agtaactgt attttagtt gtttttctg 
      aacgttctg agggttttg caacaacag ttgggcgtg 
      gaagggacg aaaaatgcc gttcaggtg ttcctagaa 
      gttgcggtt aaggagcaa ggagcaggg aattttctt 
      gataagttg ctacaaatt ttccagcta gtagtggaa 
      gcccccggt tcagggtac aaaaatttt ttgccgggg 
      attctccaa ctgtgtatg gacaacgtc tatcctttt 
      attttgtcg cacggggcg gaaaaaacc gacgctttc 
      atgtccctt ttgactctt ctgcacagc atcttgctc 
      cacagatgg cagtacttc tacagttcg caggttagg 
      ttgggttac tcgccggtt tacaccgaa accgagaac 
      gacgccccc gagcctgtg caactaatg gctgtgctg 
      caagtattc ggccaagcg ctgcttcag caagatata 
      aatattttt aagctgagt ttagcctct ttggaagat 
      ctcaatgcc aaatggaaa ttgtatttg aatgttttg 
      tttcggtac aacggcctg tcgaagtac ttgtcggtg 
      ttgctgcaa actttaatc gataagtct cagagtttg 
      ttatctgag gacatacaa gtcgccatt tataacatg 
      gccgctgtt aatttcgac cactttttt tcgacattc 
      cttccggat tttatcaga aatattgac gctattacg 
      gatcaacag agggagatt ttattgaca aattttatg 
      caaaaccat gataaggac atgcccacg tttgtgcag 
      catttgcgg attttcgtg aacgacgcc caacatttc 
      aaattgtgc agtttgtcc taaactgtg aattttatt 
      gtaaatgct caaactgta ttaaattaa ggaataaat 
      agatttgtt aaat
    • >TC006436 RB
      gcattttag gacgaccac gacatgtgc gtgttggca 
      atgtcgaca atcaacgaa ctcctctac cgaaaatgc 
      actcctccg ggcagccag gaatttttt acccagctt 
      tattactac acaattgaa ttattacgc gatataacg 
      aacagtcga ctcgacact ttggacccg attttcgtc 
      gaaaaaatg tccgaatta ttaacccta ctagtcgaa 
      cagcacttg tggcggctt gaggccgaa cctcgtttc 
      tcagctttg gatttttta tcactgctt taccaacta 
      actgtccaa ctgccatca atgcaatgc tatctcaga 
      tgtctcaat gtgtgggcg gcttttttc aaacaaacc 
      aaatcgcag aaaaaccac aagtacttg gaggctttt 
      ctcgccttg cttacggca cttttgcaa aaaatacag 
      ttctcgacg aacgctagt cagcttaaa gaaattgat 
      aatgtggac acgaacgat gataacgaa acggattgg 
      cagattttt ttgaaaact tcgattgaa atcgtgtca 
      atggttgcg gagtatgcg cctcttgaa accctcaat 
      cttattcta atgccgtgg aaaacatgc tatgatatt 
      taccggcgg attgagaca attgtcgac caccaaaac 
      tgttcctta aattgtgaa ttatcagag agcgaaaga 
      ctgtcttac atcatcacc gatttttca tccctaact 
      cagactcta gctaggtta tctcctcta ttcttcgat 
      caagaaaat gaggaaatc accaacgtc tcatcaccc 
      atgattaat aatttaatc gagaaactc ctggaaagt 
      gcctcactt gcaacttcc gtcagactt tataatctt 
      aaaacgaac aactcgcat ctgactgat tgtttcatt 
      gataaccac agccaactg ctcgccgcg ctgaaaacc 
      tacctaatt tggataacc cgcaacgac aaggtggca 
      atcgaaaac ctcaaacta atagtcgac atcaccctc 
      ccagtcatc cacacttcc gttccgcta aaaatcagc 
      aattcatcg gcacacctt ttcctcgcc ctctcgaat 
      ctcccgtgc tctcctaat ttaatcctc ttgcccgac 
      gtgtctcac ttcataaat gcggctcct aatttcaaa 
      ttcagagac atcgaaacg aattttgtc acctgcagt 
      gccattacg aacttattg ttgaaaccg tggcctgat 
      tgttcgcaa gagaacgcc aaccatcgg agcgccctc 
      acgggggtt ttcttcgac ggcttgacc tggcctttc 
      cgagacttg acgctgtca aacgacgaa caacgagtg 
      cggcaagtg acggaggac gtcctcccg atcgtctct 
      cacatcgtt gatttctgc aaagacttt ccaatcgcc 
      tcaaaacgg cgacttttc ctagcgatt aaaaccaca 
      atcgagcaa tcgatcgtt ctattccca gcgtttgcg 
      aaaaactcc gagattagt aactgtatt ttagttgtt 
      tttctgaac gttctgagg gttttgcaa caacagttg 
      ggcgtggaa gggacgaaa aatgccgtt caggtgttc 
      ctagaagtt gcggttaag gagcaagga gcagggaat 
      tttcttgat aagttgcta caaattttc cagctagta 
      gtggaagcc cccggttca gggtacaaa aattttttg 
      ccggggatt ctccaactg tgtatggac aacgtctat 
      ccttttatt ttgtcgcac ggggcggaa aaaaccgac 
      gctttcatg tcccttttg actcttctg cacagcatc 
      ttgctccac agatggcag tacttctac agttcgcag 
      gttaggttg ggttactcg ccggtttac accgaaacc 
      gagaacgac gcccccgag cctgtgcaa ctaatggct 
      gtgctgcaa gtattcggc caagcgctg cttcagcaa 
      gatataaat atttttaag ctgagttta gcctctttg 
      gaagatctc aatgccaaa tggaaattg tatttgaat 
      gttttgttt cggtacaac ggcctgtcg aagtacttg 
      tcggtgttg ctgcaaact ttaatcgat aagtctcag 
      agtttgtta tctgaggac atacaagtc gccatttat 
      aacatggcc gctgttaat ttcgaccac tttttttcg 
      acattcctt ccggatttt atcagaaat attgacgct 
      attacggat caacagagg gagatttta ttgacaaat 
      tttatgcaa aaccatgat aaggacatg cccacgttt 
      gtgcagcat ttgcggatt ttcgtgaac gacgcccaa 
      catttcaaa ttgtgcagt ttgtcctaa actgtgaat 
      tttattgta aatgctcaa actgtatta aattaagga 
      ataaataga tttgttaaa t
    • >TC006436 RC
      gacgtcaga aacgtcaaa atgttgata atttcgtaa 
      agttaaata acgttattt actaataat taacatcgt 
      tgcatcaat gtcatgcat ttgttgata tagcagaca 
      taaaaaatg gaacgtaac gagaatgaa tccttggtt 
      gcgttggag tacctactg gatgaattt tttaacccg 
      gtcacaagc aattcacga aaacatgaa attgaacag 
      cagctcagt tcatttaaa tacctaccc caatcacgg 
      aaactgtgt ttgtacttt cttacaaat acctctagt 
      caatatgtg actatgttt gccttatcg acattagag 
      tctgtgatt aatcaacag tgggcaaat actgattgg 
      ccttttcga gaagagtta aaaaacaca ctgtacaat 
      tatttaata gagaaagga aacagcgca ccccatttt 
      ataaggagc aaatatgcc aaattgctc gtaattata 
      gcaaaacaa gactggcca tcgcagtac ccgaatttt 
      tttattaac attattgag ttgttgaaa tccgaacca 
      aatcaactg attggttta attttactg aaaacgaca 
      agcgaggag ttgatgggg ctccaagcc tcgtttgag 
      aatggtaga aaagacgaa attacaaga ctgcttcat 
      cagtacatt cctgtggtt ttcgattca ctaaacacg 
      attctcgaa aatttaggc actaaacct agacacacc 
      gctacagcg accccgccc ccgtcccca acccacccc 
      acgtccgct cccagcctc ccccagcaa ctggccact 
      gcgaccttc aagcccgac agcaaagcc ctgaataag 
      gaagccctg gagacagtg caacacctc tttacttgg 
      gtgcaaatc aaccaaatt cccccgtcg atcattaaa 
      gccattttt cacttcacc aacatatcc agctatgct 
      caagtgagt ataaaaacg cgatacgga tcaactggt 
      ttttatttg ttttgattg agtcgttcc gggtttact 
      aaaacaagc tcgaaagat tcaaacgtt tggaacctc 
      cgtatgtcc gcgtcattt cggactcgg gtcgagggc 
      agtttgcga attttttcc acgtagttt gtggacgga 
      atgtgaaat tcgtaacaa caaaatttg agaaaatca 
      tcataggtt gatatttgg tcggatgaa acttcgact 
      tcgatgaag tctttgtca gggaggtcg gcaactcgt 
      aatttgaaa atgtggtat cctaaaaaa tactttgct 
      taattgttt tattaaaat aaatgttag taaataag
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY