| General information | |||
| TC004461 | Gene
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
NC_007417.3: 4742889..4753366 | |
| Sequence information | |||
| Transcripts / Proteins (2) | Get mRNA sequence
Get CDS sequence Get protein sequence |
||
| Ortholog information (from OrthoDB)
The information about the homolog genes in Drosophila
is provided by OrthoDB http://www.orthodb.org/.
The homologs are sorted according to their similarity score. For an orthology statement additional
analysis are required. | |||
| Closest fly homologs |
|
TC004461 | |
GO terms for Tribolium
-
{{ goTerm.term }} ({{ goTerm.evidence }}){{ goTerm.evidenceTooltip }}{{goTerm.showAll ? '[-]' : '[+]'}}Status: {{ goTerm.status }}
Evidence: {{ goTerm.evidence }} ({{ goTerm.evidenceTooltip }})
Reference: {{ goTerm.referenceText }}
Quotation: {{ goTerm.quotation }}
Submitter: {{ goTerm.name }}
There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.
GO terms for the homologous Drosophila genes
Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.
| Gene | {{ goGene }} |
|
|---|---|---|
| GO ID | * {{ blurIdResult }} |
|
| Evidence | {{ blurEvidenceResult }} |
|
| Reference | * {{ blurReferenceResult }} |
|
| Quotation | ||
| Name | ||
| Publish name | ||
| {{ unavailableText }} |
* : mandatory fields
For help on how to submit larger datasets or non experimental data please contact us.
Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.
| General information | ||||
| iB_03764 | iB fragment
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
Get FastA Get primers |
||
Usually 10 injected animals
Pupal injection procedure
Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.
3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.
9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.
11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.
Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.
13 dpi: Egg productivity and Ovary analysis
The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi).
In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.
14 dpi: Analysis of embryonic musculature and early embryonic development
Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.
15 dpi: Analysis of larval instar 1 cuticle
Offspring of injected females were analysed and cuticle phenotypes were annotated.
22 dpi: Stink gland analysis
Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.
Terms used in the pupal injection procedure
- larval pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- empty eggs
- Just empty shells are visible, no cuticle has been developed.
- strong defects
- L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
- strongly fragmented (cuticle crumbs)
- No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
- cuticle remnants (with unidentifiable segments)
- Segments or parts of appendages are recognizable, but identity is not clear.
- cuticle remnants (with some identifiable segments)
- At least one segment or appendage is clearly regonizable.
- number of eggs on slide
- affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
For the embryonic muscle analysis the hatched as well as the not hatched were analysed. - total number of affected eggs/embryos/larvae
- Summary of all different phenotypes/ phenotypic series which were annotated.
- inside-out
- The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
Metamorphosis and survival
Lethality 11 days after pupal injection: 0.0% (includes death as pupa, adult)
Analysis of embryonic musculature and early development
number of eggs/embryos/larvae on slide: > 50
larval musculature irregular -
Penetrance (percentage of animals/eggs on slide): 30% - 50%
affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): 30% - 50%
remarks: muscle pattern potentially obscured by segmentation defect,
affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): 30% - 50%
remarks: muscle pattern potentially obscured by segmentation defect,
Analysis of larval stage 1 cuticle
number of eggs/embryos/larvae on slide: > 50
egg without cuticle embryo/egg without visible larval cuticle in cuticle preparation - Penetrance (percentage of animals/eggs on slide): less than 30%
cuticle remnants without visible segmentation, differentiation or axis - Penetrance (percentage of animals/eggs on slide): less than 30%
larva appendages shape irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
head appendages position irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
head not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
head constricted - Penetrance (percentage of animals/eggs on slide): 30% - 50%
head not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
thorax not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
thorax constricted - Penetrance (percentage of animals/eggs on slide): 30% - 50%
thorax not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
abdomen not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): 50% - 80%
egg without cuticle embryo/egg without visible larval cuticle in cuticle preparation - Penetrance (percentage of animals/eggs on slide): less than 30%
cuticle remnants without visible segmentation, differentiation or axis - Penetrance (percentage of animals/eggs on slide): less than 30%
larva appendages shape irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
head appendages position irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
head not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
head constricted - Penetrance (percentage of animals/eggs on slide): 30% - 50%
head not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
thorax not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
thorax constricted - Penetrance (percentage of animals/eggs on slide): 30% - 50%
thorax not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
abdomen not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): 50% - 80%
Usually 10 injected animals
Larval injection procedure
Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.
11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.
16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.
19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.
22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.
41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).
Terms used in the larval injection procedure
- pupal/ adult pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- pupal molt not fulfilled
- The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
Metamorphosis and survival
Lethalities 11 days after larval injection: 20.0% (includes death as larva, prepupa, pupa)
Lethalities 22 days after larval injection: 20.0% (includes death as larva, prepupa, pupa, adult)
Days post injection
- >TC004461 RA
MIESDSPIA SPLAGSGPG GHKPSFKST KLARRARSF KDDFLGKIS QMRSPTGPG LRSHSPKER PSKSDMVEH AYSTTKGPL QELENLWKQ TQATLKHFR DVVSKQKLE MLPGNGTIV LDTVWQINL VVRSSINSD SSNAIFSAT SHMYQSVAR LIKLCDDAL IDDKSSELT TENVNEIVA QVEVAVQEL IRLVQEKIA HQQISYKTT PRSSYVNTS LEMPAQRNS LPDIPLTPR ERQLLEQNS CGPPIVRSS HSTESILRD SSPPPKPPL PDGHSEPSS CITPPPLPP KKKNYKLHR LTDECSSLD NSPIASSLE RVSVRSKSP EDSISLLSA SAGSLDSVL NHSRGEEDD EIKGIMERT CDSEVDNHS ADIFGANGS HSSWEESSL SSNISGQIT DYNRLSNTD SGFISSQSY RSSSYSKRS SQQSSVSSQ WAQHTSKMS TETVKTEST MHSVHKEGD SLLTIKNFD QKTSSSSSS SSLVSTIVN AGQLSITDA DETQPPAVP QKTKRKERQ PSPYDNVPD SNLGGELLV TCPMHQSHQ SLASSTSMS STMGQDSNK PPPLPPKKK HIMAYMEMF GNCSHANEQ EFMRHSVHM VQSHWAQPP TPGLPTTQS CSFSHTSHS SSRSSHTQI QILNVPPHS TMDQRVSSP LHSPNPIIM ESNSPPPAL PPKQRSRNS SVKPSPPPT PTVNEVKPQ SPVKTLPDL LEHTANSVT KTAEDKNEI SEVNRCDID LMEEVNVDD WLVLKKPEE EGPDIRGGP IDALIIQAT KATKNGVFM YQEAFLTTY RTFITPLDL ITKLIRRYD HFSFKPNNK KLRSEAFAL IVRVVNDLT VSDLDDQLQ CKLMHFVQQ LISSGEITL AKALRVKHL ERYEAKQMS LKYTNVVTS LSLTARTST LLDFKSEQI AEQMTLLDA DLFMKIEIP EVLIWAQEQ NEERSPNLT RFTEHFNKM SYWARTRIL TAEGKDVRE KYFLKFIKI MKHLRKINN FNSYLALLS ALDSAPIRR LEWQKHVQE GLKEYCALI DSSSSFRAY RVALAETQP PCIPYIGLV LQDLTFVHI GNSNLLPDG TINFSKRWQ QYNIVENMK KFKKGIYTF KKQERIIQF FQNFDDFIG EDAMWQLSE SIKPRGGKK ATS
- >TC004461 RB
MIESDSPIA SPLAGSGPG GHKPSFKST KLARRARSF KDDFLGKIS QMRSPTGPG LRSHSPKER PSKSDMVEH AYSTTKGPL QELENLWKQ TQATLKHFR DVVSKQKLE MLPGNGTIV LDTVWQINL VVRSSINSD SSNAIFSAT SHMYQSVAR LIKLCDDAL IDDKSSELT TENVNEIVA QVEVAVQEL IRLVQEKIA HQQISYKTT PRSSYVNTS LEMPAQRNS LPDIPLTPR ERQLLEQNS CGPPIVRSS HSTESILRD SSPPPKPPL PDGVLFNIS HSEPSSCIT PPPLPPKKK NYKLHRLTD ECSSLDNSP IASSLERVS VRSKSPEDS ISLLSASAG SLDSVLNHS RGEEDDEIK GIMERTCDS EVDNHSADI FGANGSHSS WEESSLSSN ISGQITDYN RLSNTDSGF ISSQSYRSS SYSKRSSQQ SSVSSQWAQ HTSKMSTET VKTESTMHS VHKEGDSLL TIKNFDQKT SSSSSSSSL VSTIVNAGQ LSITDADET QPPAVPQKT KRKERQPSP YDNVPDSNL GGELLVTCP MHQSHQSLA SSTSMSSTM GQDSNKPPP LPPKKKHIM AYMEMFGNC SHANEQEFM RHSVHMVQS HWAQPPTPG LPTTQSCSF SHTSHSSSR SSHTQIQIL NVPPHSTMD QRVSSPLHS PNPIIMESN SPPPALPPK QRSRNSSVK PSPPPTPTV NEVKPQSPV KTLPDLLEH TANSVTKTA EDKNEISEV NRCDIDLME EVNVDDWLV LKKPEEEGP DIRGGPIDA LIIQATKAT KNGVFMYQE AFLTTYRTF ITPLDLITK LIRRYDHFS FKPNNKKLR SEAFALIVR VVNDLTVSD LDDQLQCKL MHFVQQLIS SGEITLAKA LRVKHLERY EAKQMSLKY TNVVTSLSL TARTSTLLD FKSEQIAEQ MTLLDADLF MKIEIPEVL IWAQEQNEE RSPNLTRFT EHFNKMSYW ARTRILTAE GKDVREKYF LKFIKIMKH LRKINNFNS YLALLSALD SAPIRRLEW QKHVQEGLK EYCALIDSS SSFRAYRVA LAETQPPCI PYIGLVLQD LTFVHIGNS NLLPDGTIN FSKRWQQYN IVENMKKFK KGIYTFKKQ ERIIQFFQN FDDFIGEDA MWQLSESIK PRGGKKATS
- >TC004461 RA
atgatagaa agcgacagt cctattgct tcacctctg gccgggtcc ggtcctggc ggccacaaa ccctccttc aaaagcacc aaactcgct cgccgcgcc cgttcgttt aaagacgac tttttgggc aaaatctcg caaatgcgc agccccaca ggcccgggc ctccgctcg cacagcccc aaggagcgg ccgtccaag tcggacatg gtcgagcac gcgtattcg acgaccaaa gggcctcta caagagctg gaaaacctc tggaagcag acccaggcc acgctaaaa cacttccga gacgtcgtc tcgaagcaa aagctcgaa atgctgccc ggaaatggc accatagtg ctcgacaca gtgtggcaa ataaacctc gttgtgcga tcgtcaatc aactcggat tcgagcaat gcgattttt tcggccacc agccacatg taccagagt gtggccagg ctgatcaaa ctgtgcgat gatgcgctg attgatgac aaaagcagc gaattgacg acggagaat gtcaacgaa atcgtggcg caagtggag gtggcggtg caggagctg atcaggttg gtccaggag aagatcgcg caccaacaa atttcttat aagacaaca ccaaggagt tcgtacgtt aacaccagc ctagaaatg ccagcacaa cgaaattct ttacctgat attcctctg acaccaagg gagaggcag ctgttggag cagaattcg tgtgggccg ccgattgtg agaagcagt cacagcacg gagtcgatc ttgagggac tccagtccg cctcccaag ccaccgcta ccagatggc cactcggaa ccgagcagt tgtataaca ccacctcct ttacctcca aagaagaaa aactacaaa ctgcatcga ttgacagac gaatgttcg agtttggat aactcccct attgcttct agtctagaa agagtctca gttcggtcg aaatcaccc gaagactca atctccctg ttatcagca agtgcgggc agtttagac tcggtccta aaccactct cgtggcgag gaagacgac gaaattaaa ggcataatg gagcggaca tgtgacagt gaagtcgat aatcattca gctgatatt ttcggcgca aacgggtct cacagttcc tgggaggag tcgtcatta agctcaaac atatccggt caaatcacc gactacaat cgactatca aacaccgac tcaggcttt atatcgtcg cagtcttac cgatcgtcg agttactcc aaacggagc tctcaacag agctcggtt agctcgcag tgggcgcaa cacacgtcg aaaatgtca accgaaacg gttaaaacc gaaagtacg atgcacagt gtgcacaaa gaaggcgac tcgctttta accatcaaa aacttcgac caaaaaaca agcagtagc agtagcagc agctcgctg gtttcaacg atagtaaat gccggacaa ctgagcatc actgacgct gatgagaca caaccgcct gccgttcca cagaaaacc aaaagaaaa gaacggcaa ccctcacct tatgataat gtacctgat agtaattta ggaggcgaa cttttagtc acttgcccc atgcaccaa tcccatcaa agccttgcg agtagcact agtatgtca agtacgatg ggtcaagac agcaataag cctccgcct ctcccaccc aagaaaaaa cacataatg gcgtacatg gaaatgttc ggcaactgc tcccacgcc aacgaacag gaattcatg cgacattca gtgcacatg gtgcagtcg cactgggcc caacctccg acccctggt ctgccaaca acccagtca tgttcattc agtcacact tcacacagt tctagtcgt tcatcacac actcaaatc caaattcta aacgtacca ccacattcc acaatggac caaagagta tcatcgcct ttgcattcc ccaaacccc atcataatg gaatcaaat tctcctccc ccagctctc ccgcccaaa cagaggtct aggaacagt tcggttaaa ccgtcgccg ccgcccacg cccactgtt aacgaagtc aagccgcaa tcgccggtt aaaacgcta ccggatttg ctagaacac accgccaat tcggtgacg aagactgct gaagataag aatgaaatt agtgaagtt aatcgctgt gatatagac ttaatggaa gaagtgaac gttgatgat tggcttgtt ttgaagaaa ccggaggaa gagggccct gatatcaga ggggggccc attgatgcc ctcatcatc caggccacc aaggccacc aaaaacgga gttttcatg tatcaagaa gcatttttg acaacgtac cgcacgttc atcacccct ctcgaccta ataacaaaa cttatacga agatacgat cacttttcg ttcaaacct aacaacaag aaattgcga tcggaggcg ttcgctttg atcgttcga gtggtgaat gacttgacc gtttccgat ttggacgac caactccaa tgcaaactc atgcacttc gtgcaacag ctcatctct tcgggcgaa atcacctta gccaaagcc ctccgagtc aaacacttg gaacggtac gaagccaaa caaatgagt ctgaaatac accaatgtc gtgacgagt ctctcgctc actgcgcga acttcgact ctgctcgac ttcaaatcg gagcaaatc gccgaacaa atgactctg ctcgatgcc gatttgttt atgaagatc gaaataccg gaagtgctg atttgggca caggaacag aatgaggag aggagtccg aatttgacg agattcact gaacatttt aataaaatg tcgtactgg gcacgtacg aggatttta acagccgag gggaaagac gtgcgggag aagtatttc ttgaagttt attaaaatt atgaagcat ttgaggaaa attaataat tttaactcg tatttggcg ctgctgtcg gcgctagat tcggccccc attcggagg ttggagtgg cagaagcat gtgcaagaa gggttgaag gagtattgt gctttaata gacagttcg tcgagtttt agggcatat agggtggct ttggctgag actcaaccc ccgtgcatc ccttacata gggttggtt ctgcaagac ttaacattc gttcacata ggaaacagt aacttatta cctgatggt acaataaac ttttcaaag agatggcaa cagtacaat attgttgaa aatatgaaa aagtttaag aaaggaatc tacactttc aaaaaacaa gagcgcatt attcagttt ttccaaaac tttgatgat ttcattggt gaggatgca atgtggcaa ttatcagag tccataaaa ccccgtggt ggcaaaaaa gctacttcg taa
- >TC004461 RB
atgatagaa agcgacagt cctattgct tcacctctg gccgggtcc ggtcctggc ggccacaaa ccctccttc aaaagcacc aaactcgct cgccgcgcc cgttcgttt aaagacgac tttttgggc aaaatctcg caaatgcgc agccccaca ggcccgggc ctccgctcg cacagcccc aaggagcgg ccgtccaag tcggacatg gtcgagcac gcgtattcg acgaccaaa gggcctcta caagagctg gaaaacctc tggaagcag acccaggcc acgctaaaa cacttccga gacgtcgtc tcgaagcaa aagctcgaa atgctgccc ggaaatggc accatagtg ctcgacaca gtgtggcaa ataaacctc gttgtgcga tcgtcaatc aactcggat tcgagcaat gcgattttt tcggccacc agccacatg taccagagt gtggccagg ctgatcaaa ctgtgcgat gatgcgctg attgatgac aaaagcagc gaattgacg acggagaat gtcaacgaa atcgtggcg caagtggag gtggcggtg caggagctg atcaggttg gtccaggag aagatcgcg caccaacaa atttcttat aagacaaca ccaaggagt tcgtacgtt aacaccagc ctagaaatg ccagcacaa cgaaattct ttacctgat attcctctg acaccaagg gagaggcag ctgttggag cagaattcg tgtgggccg ccgattgtg agaagcagt cacagcacg gagtcgatc ttgagggac tccagtccg cctcccaag ccaccgcta ccagatggt gttttgttt aatataagc cactcggaa ccgagcagt tgtataaca ccacctcct ttacctcca aagaagaaa aactacaaa ctgcatcga ttgacagac gaatgttcg agtttggat aactcccct attgcttct agtctagaa agagtctca gttcggtcg aaatcaccc gaagactca atctccctg ttatcagca agtgcgggc agtttagac tcggtccta aaccactct cgtggcgag gaagacgac gaaattaaa ggcataatg gagcggaca tgtgacagt gaagtcgat aatcattca gctgatatt ttcggcgca aacgggtct cacagttcc tgggaggag tcgtcatta agctcaaac atatccggt caaatcacc gactacaat cgactatca aacaccgac tcaggcttt atatcgtcg cagtcttac cgatcgtcg agttactcc aaacggagc tctcaacag agctcggtt agctcgcag tgggcgcaa cacacgtcg aaaatgtca accgaaacg gttaaaacc gaaagtacg atgcacagt gtgcacaaa gaaggcgac tcgctttta accatcaaa aacttcgac caaaaaaca agcagtagc agtagcagc agctcgctg gtttcaacg atagtaaat gccggacaa ctgagcatc actgacgct gatgagaca caaccgcct gccgttcca cagaaaacc aaaagaaaa gaacggcaa ccctcacct tatgataat gtacctgat agtaattta ggaggcgaa cttttagtc acttgcccc atgcaccaa tcccatcaa agccttgcg agtagcact agtatgtca agtacgatg ggtcaagac agcaataag cctccgcct ctcccaccc aagaaaaaa cacataatg gcgtacatg gaaatgttc ggcaactgc tcccacgcc aacgaacag gaattcatg cgacattca gtgcacatg gtgcagtcg cactgggcc caacctccg acccctggt ctgccaaca acccagtca tgttcattc agtcacact tcacacagt tctagtcgt tcatcacac actcaaatc caaattcta aacgtacca ccacattcc acaatggac caaagagta tcatcgcct ttgcattcc ccaaacccc atcataatg gaatcaaat tctcctccc ccagctctc ccgcccaaa cagaggtct aggaacagt tcggttaaa ccgtcgccg ccgcccacg cccactgtt aacgaagtc aagccgcaa tcgccggtt aaaacgcta ccggatttg ctagaacac accgccaat tcggtgacg aagactgct gaagataag aatgaaatt agtgaagtt aatcgctgt gatatagac ttaatggaa gaagtgaac gttgatgat tggcttgtt ttgaagaaa ccggaggaa gagggccct gatatcaga ggggggccc attgatgcc ctcatcatc caggccacc aaggccacc aaaaacgga gttttcatg tatcaagaa gcatttttg acaacgtac cgcacgttc atcacccct ctcgaccta ataacaaaa cttatacga agatacgat cacttttcg ttcaaacct aacaacaag aaattgcga tcggaggcg ttcgctttg atcgttcga gtggtgaat gacttgacc gtttccgat ttggacgac caactccaa tgcaaactc atgcacttc gtgcaacag ctcatctct tcgggcgaa atcacctta gccaaagcc ctccgagtc aaacacttg gaacggtac gaagccaaa caaatgagt ctgaaatac accaatgtc gtgacgagt ctctcgctc actgcgcga acttcgact ctgctcgac ttcaaatcg gagcaaatc gccgaacaa atgactctg ctcgatgcc gatttgttt atgaagatc gaaataccg gaagtgctg atttgggca caggaacag aatgaggag aggagtccg aatttgacg agattcact gaacatttt aataaaatg tcgtactgg gcacgtacg aggatttta acagccgag gggaaagac gtgcgggag aagtatttc ttgaagttt attaaaatt atgaagcat ttgaggaaa attaataat tttaactcg tatttggcg ctgctgtcg gcgctagat tcggccccc attcggagg ttggagtgg cagaagcat gtgcaagaa gggttgaag gagtattgt gctttaata gacagttcg tcgagtttt agggcatat agggtggct ttggctgag actcaaccc ccgtgcatc ccttacata gggttggtt ctgcaagac ttaacattc gttcacata ggaaacagt aacttatta cctgatggt acaataaac ttttcaaag agatggcaa cagtacaat attgttgaa aatatgaaa aagtttaag aaaggaatc tacactttc aaaaaacaa gagcgcatt attcagttt ttccaaaac tttgatgat ttcattggt gaggatgca atgtggcaa ttatcagag tccataaaa ccccgtggt ggcaaaaaa gctacttcg taa
- >TC004461 RA
gaaggacaa acagaaatt aagttttga aattaaatg tgccaccta atcatgata gaaagcgac agtcctatt gcttcacct ctggccggg tccggtcct ggcggccac aaaccctcc ttcaaaagc accaaactc gctcgccgc gcccgttcg tttaaagac gactttttg ggcaaaatc tcgcaaatg cgcagcccc acaggcccg ggcctccgc tcgcacagc cccaaggag cggccgtcc aagtcggac atggtcgag cacgcgtat tcgacgacc aaagggcct ctacaagag ctggaaaac ctctggaag cagacccag gccacgcta aaacacttc cgagacgtc gtctcgaag caaaagctc gaaatgctg cccggaaat ggcaccata gtgctcgac acagtgtgg caaataaac ctcgttgtg cgatcgtca atcaactcg gattcgagc aatgcgatt ttttcggcc accagccac atgtaccag agtgtggcc aggctgatc aaactgtgc gatgatgcg ctgattgat gacaaaagc agcgaattg acgacggag aatgtcaac gaaatcgtg gcgcaagtg gaggtggcg gtgcaggag ctgatcagg ttggtccag gagaagatc gcgcaccaa caaatttct tataagaca acaccaagg agttcgtac gttaacacc agcctagaa atgccagca caacgaaat tctttacct gatattcct ctgacacca agggagagg cagctgttg gagcagaat tcgtgtggg ccgccgatt gtgagaagc agtcacagc acggagtcg atcttgagg gactccagt ccgcctccc aagccaccg ctaccagat ggccactcg gaaccgagc agttgtata acaccacct cctttacct ccaaagaag aaaaactac aaactgcat cgattgaca gacgaatgt tcgagtttg gataactcc cctattgct tctagtcta gaaagagtc tcagttcgg tcgaaatca cccgaagac tcaatctcc ctgttatca gcaagtgcg ggcagttta gactcggtc ctaaaccac tctcgtggc gaggaagac gacgaaatt aaaggcata atggagcgg acatgtgac agtgaagtc gataatcat tcagctgat attttcggc gcaaacggg tctcacagt tcctgggag gagtcgtca ttaagctca aacatatcc ggtcaaatc accgactac aatcgacta tcaaacacc gactcaggc tttatatcg tcgcagtct taccgatcg tcgagttac tccaaacgg agctctcaa cagagctcg gttagctcg cagtgggcg caacacacg tcgaaaatg tcaaccgaa acggttaaa accgaaagt acgatgcac agtgtgcac aaagaaggc gactcgctt ttaaccatc aaaaacttc gaccaaaaa acaagcagt agcagtagc agcagctcg ctggtttca acgatagta aatgccgga caactgagc atcactgac gctgatgag acacaaccg cctgccgtt ccacagaaa accaaaaga aaagaacgg caaccctca ccttatgat aatgtacct gatagtaat ttaggaggc gaactttta gtcacttgc cccatgcac caatcccat caaagcctt gcgagtagc actagtatg tcaagtacg atgggtcaa gacagcaat aagcctccg cctctccca cccaagaaa aaacacata atggcgtac atggaaatg ttcggcaac tgctcccac gccaacgaa caggaattc atgcgacat tcagtgcac atggtgcag tcgcactgg gcccaacct ccgacccct ggtctgcca acaacccag tcatgttca ttcagtcac acttcacac agttctagt cgttcatca cacactcaa atccaaatt ctaaacgta ccaccacat tccacaatg gaccaaaga gtatcatcg cctttgcat tccccaaac cccatcata atggaatca aattctcct cccccagct ctcccgccc aaacagagg tctaggaac agttcggtt aaaccgtcg ccgccgccc acgcccact gttaacgaa gtcaagccg caatcgccg gttaaaacg ctaccggat ttgctagaa cacaccgcc aattcggtg acgaagact gctgaagat aagaatgaa attagtgaa gttaatcgc tgtgatata gacttaatg gaagaagtg aacgttgat gattggctt gttttgaag aaaccggag gaagagggc cctgatatc agagggggg cccattgat gccctcatc atccaggcc accaaggcc accaaaaac ggagttttc atgtatcaa gaagcattt ttgacaacg taccgcacg ttcatcacc cctctcgac ctaataaca aaacttata cgaagatac gatcacttt tcgttcaaa cctaacaac aagaaattg cgatcggag gcgttcgct ttgatcgtt cgagtggtg aatgacttg accgtttcc gatttggac gaccaactc caatgcaaa ctcatgcac ttcgtgcaa cagctcatc tcttcgggc gaaatcacc ttagccaaa gccctccga gtcaaacac ttggaacgg tacgaagcc aaacaaatg agtctgaaa tacaccaat gtcgtgacg agtctctcg ctcactgcg cgaacttcg actctgctc gacttcaaa tcggagcaa atcgccgaa caaatgact ctgctcgat gccgatttg tttatgaag atcgaaata ccggaagtg ctgatttgg gcacaggaa cagaatgag gagaggagt ccgaatttg acgagattc actgaacat tttaataaa atgtcgtac tgggcacgt acgaggatt ttaacagcc gaggggaaa gacgtgcgg gagaagtat ttcttgaag tttattaaa attatgaag catttgagg aaaattaat aattttaac tcgtatttg gcgctgctg tcggcgcta gattcggcc cccattcgg aggttggag tggcagaag catgtgcaa gaagggttg aaggagtat tgtgcttta atagacagt tcgtcgagt tttagggca tatagggtg gctttggct gagactcaa cccccgtgc atcccttac atagggttg gttctgcaa gacttaaca ttcgttcac ataggaaac agtaactta ttacctgat ggtacaata aacttttca aagagatgg caacagtac aatattgtt gaaaatatg aaaaagttt aagaaagga atctacact ttcaaaaaa caagagcgc attattcag tttttccaa aactttgat gatttcatt ggtgaggat gcaatgtgg caattatca gagtccata aaaccccgt ggtggcaaa aaagctact tcgtaagta gtggccatc ttagtgtaa tagcaatac ttgtcgatt ttaacgcaa ttttgagct ctatttaaa taaatattt atttataat tgtatattt taaaaatca gtattttat gaaatgagc taggaggaa ttttcgtga gacttcttc gtcctttac aaccaagag ttttgtcgc gataaaacg taaaatgcg gtgctttca atctctaac ttaggtctt aaaaaattc tatttattg aaacaagga atttttatg caacgaatt tttgttaag ctttcgcct aaaccaatc gattttttg cgaagtctt tactctgtt cattatgaa tgctttatg cataagact gagctgtac tgttttctg aatgttcta aggaatttt tcgttataa gtggcattt gtaaaacgg actgaaata aacactgta agttcaacg acataaaga cgatgttat agcacttct tccatttat tgcaaccgc aaattgagt gttagatta attaaactt aatagttat gtgtacgag cattactgt tagagaaaa agttaacta ttagaaggc ctaactaaa tataagcta acttaaatt aaggacagc tgagtagac tgctctaac ccattaaat tatcaaacc aaacaaaac tcgtggtga gtttattta tgttgcaat attttttag accaattat acatgtgtt ttagatttg caaatgtcg gagtgtatt ttttcaaaa atgtatcac tttttagct caattgtat tatagatag atgtctatt ctgttgaat cttctttta acagaaatg tgtaaggcg attttcttc atgcatatt aacatatca taggtggaa acatatgca gtgatacgg acgtactat tttcgattg tgattcact cttatgatg cgtcttttg ttgcacatt tctgtacaa ctgtgatgt caacttttt taactgttt ttatttatc tttctttac acggtcacg ttatttatt cagccgtgc ccaataaca cgttacaca ggcaagtta tctttatta ggaacggcc agtgggtgt tactttgtg tgccatttt attcattca ttttcatga tattaaatg agttgtagt gattgtatg atgtacata aattgtgta aatttgttt atagttttt tatttgttt ccgtaacat gtttgtgta cttgctttt aaagtatgt at
- >TC004461 RB
gaaggacaa acagaaatt aagttttga aattaaatg tgccaccta atcatgata gaaagcgac agtcctatt gcttcacct ctggccggg tccggtcct ggcggccac aaaccctcc ttcaaaagc accaaactc gctcgccgc gcccgttcg tttaaagac gactttttg ggcaaaatc tcgcaaatg cgcagcccc acaggcccg ggcctccgc tcgcacagc cccaaggag cggccgtcc aagtcggac atggtcgag cacgcgtat tcgacgacc aaagggcct ctacaagag ctggaaaac ctctggaag cagacccag gccacgcta aaacacttc cgagacgtc gtctcgaag caaaagctc gaaatgctg cccggaaat ggcaccata gtgctcgac acagtgtgg caaataaac ctcgttgtg cgatcgtca atcaactcg gattcgagc aatgcgatt ttttcggcc accagccac atgtaccag agtgtggcc aggctgatc aaactgtgc gatgatgcg ctgattgat gacaaaagc agcgaattg acgacggag aatgtcaac gaaatcgtg gcgcaagtg gaggtggcg gtgcaggag ctgatcagg ttggtccag gagaagatc gcgcaccaa caaatttct tataagaca acaccaagg agttcgtac gttaacacc agcctagaa atgccagca caacgaaat tctttacct gatattcct ctgacacca agggagagg cagctgttg gagcagaat tcgtgtggg ccgccgatt gtgagaagc agtcacagc acggagtcg atcttgagg gactccagt ccgcctccc aagccaccg ctaccagat ggtgttttg tttaatata agccactcg gaaccgagc agttgtata acaccacct cctttacct ccaaagaag aaaaactac aaactgcat cgattgaca gacgaatgt tcgagtttg gataactcc cctattgct tctagtcta gaaagagtc tcagttcgg tcgaaatca cccgaagac tcaatctcc ctgttatca gcaagtgcg ggcagttta gactcggtc ctaaaccac tctcgtggc gaggaagac gacgaaatt aaaggcata atggagcgg acatgtgac agtgaagtc gataatcat tcagctgat attttcggc gcaaacggg tctcacagt tcctgggag gagtcgtca ttaagctca aacatatcc ggtcaaatc accgactac aatcgacta tcaaacacc gactcaggc tttatatcg tcgcagtct taccgatcg tcgagttac tccaaacgg agctctcaa cagagctcg gttagctcg cagtgggcg caacacacg tcgaaaatg tcaaccgaa acggttaaa accgaaagt acgatgcac agtgtgcac aaagaaggc gactcgctt ttaaccatc aaaaacttc gaccaaaaa acaagcagt agcagtagc agcagctcg ctggtttca acgatagta aatgccgga caactgagc atcactgac gctgatgag acacaaccg cctgccgtt ccacagaaa accaaaaga aaagaacgg caaccctca ccttatgat aatgtacct gatagtaat ttaggaggc gaactttta gtcacttgc cccatgcac caatcccat caaagcctt gcgagtagc actagtatg tcaagtacg atgggtcaa gacagcaat aagcctccg cctctccca cccaagaaa aaacacata atggcgtac atggaaatg ttcggcaac tgctcccac gccaacgaa caggaattc atgcgacat tcagtgcac atggtgcag tcgcactgg gcccaacct ccgacccct ggtctgcca acaacccag tcatgttca ttcagtcac acttcacac agttctagt cgttcatca cacactcaa atccaaatt ctaaacgta ccaccacat tccacaatg gaccaaaga gtatcatcg cctttgcat tccccaaac cccatcata atggaatca aattctcct cccccagct ctcccgccc aaacagagg tctaggaac agttcggtt aaaccgtcg ccgccgccc acgcccact gttaacgaa gtcaagccg caatcgccg gttaaaacg ctaccggat ttgctagaa cacaccgcc aattcggtg acgaagact gctgaagat aagaatgaa attagtgaa gttaatcgc tgtgatata gacttaatg gaagaagtg aacgttgat gattggctt gttttgaag aaaccggag gaagagggc cctgatatc agagggggg cccattgat gccctcatc atccaggcc accaaggcc accaaaaac ggagttttc atgtatcaa gaagcattt ttgacaacg taccgcacg ttcatcacc cctctcgac ctaataaca aaacttata cgaagatac gatcacttt tcgttcaaa cctaacaac aagaaattg cgatcggag gcgttcgct ttgatcgtt cgagtggtg aatgacttg accgtttcc gatttggac gaccaactc caatgcaaa ctcatgcac ttcgtgcaa cagctcatc tcttcgggc gaaatcacc ttagccaaa gccctccga gtcaaacac ttggaacgg tacgaagcc aaacaaatg agtctgaaa tacaccaat gtcgtgacg agtctctcg ctcactgcg cgaacttcg actctgctc gacttcaaa tcggagcaa atcgccgaa caaatgact ctgctcgat gccgatttg tttatgaag atcgaaata ccggaagtg ctgatttgg gcacaggaa cagaatgag gagaggagt ccgaatttg acgagattc actgaacat tttaataaa atgtcgtac tgggcacgt acgaggatt ttaacagcc gaggggaaa gacgtgcgg gagaagtat ttcttgaag tttattaaa attatgaag catttgagg aaaattaat aattttaac tcgtatttg gcgctgctg tcggcgcta gattcggcc cccattcgg aggttggag tggcagaag catgtgcaa gaagggttg aaggagtat tgtgcttta atagacagt tcgtcgagt tttagggca tatagggtg gctttggct gagactcaa cccccgtgc atcccttac atagggttg gttctgcaa gacttaaca ttcgttcac ataggaaac agtaactta ttacctgat ggtacaata aacttttca aagagatgg caacagtac aatattgtt gaaaatatg aaaaagttt aagaaagga atctacact ttcaaaaaa caagagcgc attattcag tttttccaa aactttgat gatttcatt ggtgaggat gcaatgtgg caattatca gagtccata aaaccccgt ggtggcaaa aaagctact tcgtaagta gtggccatc ttagtgtaa tagcaatac ttgtcgatt ttaacgcaa ttttgagct ctatttaaa taaatattt atttataat tgtatattt taaaaatca gtattttat gaaatgagc taggaggaa ttttcgtga gacttcttc gtcctttac aaccaagag ttttgtcgc gataaaacg taaaatgcg gtgctttca atctctaac ttaggtctt aaaaaattc tatttattg aaacaagga atttttatg caacgaatt tttgttaag ctttcgcct aaaccaatc gattttttg cgaagtctt tactctgtt cattatgaa tgctttatg cataagact gagctgtac tgttttctg aatgttcta aggaatttt tcgttataa gtggcattt gtaaaacgg actgaaata aacactgta agttcaacg acataaaga cgatgttat agcacttct tccatttat tgcaaccgc aaattgagt gttagatta attaaactt aatagttat gtgtacgag cattactgt tagagaaaa agttaacta ttagaaggc ctaactaaa tataagcta acttaaatt aaggacagc tgagtagac tgctctaac ccattaaat tatcaaacc aaacaaaac tcgtggtga gtttattta tgttgcaat attttttag accaattat acatgtgtt ttagatttg caaatgtcg gagtgtatt ttttcaaaa atgtatcac tttttagct caattgtat tatagatag atgtctatt ctgttgaat cttctttta acagaaatg tgtaaggcg attttcttc atgcatatt aacatatca taggtggaa acatatgca gtgatacgg acgtactat tttcgattg tgattcact cttatgatg cgtcttttg ttgcacatt tctgtacaa ctgtgatgt caacttttt taactgttt ttatttatc tttctttac acggtcacg ttatttatt cagccgtgc ccaataaca cgttacaca ggcaagtta tctttatta ggaacggcc agtgggtgt tactttgtg tgccatttt attcattca ttttcatga tattaaatg agttgtagt gattgtatg atgtacata aattgtgta aatttgttt atagttttt tatttgttt ccgtaacat gtttgtgta cttgctttt aaagtatgt at
If you use iBeetle-Base, please cite: Dönitz J et al.: Expanded and updated data and a query pipeline for iBeetle-Base,
Nucleic Acids Res. 2018 Jan 4;46(D1):D831-D835. doi: 10.1093/nar/gkx984.
The data is licensed under a
Creative Commons Attribution 3.0 Unported License. (CC-BY)
