Status
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Gene information
General information
TC031929
Former TC numbers

If one gene is splitted or genes are merged, the original TC numbers are listed. One listed former TC number indicates the previous gene has be splitted, serveral former TC number represents a merged gene.

TC004107,TC004106
Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NW_015452207.1: 18173..35382
Sequence information
Transcripts / Proteins (4) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC031929
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
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    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
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    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_03689

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 20.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 2 (3 dpi)
    Days post injection


    Analysis of embryonic musculature and early development
    number of eggs/embryos/larvae on slide: > 50 embryo/egg not developed/not fertilized - Penetrance (percentage of animals/eggs on slide): less than 30%
    affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): less than 30%
    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 50
    cuticle remnants without visible segmentation, differentiation or axis - Penetrance (percentage of animals/eggs on slide): less than 30%

    cuticle everted (inside-out) - Penetrance (percentage of animals/eggs on slide): less than 30%
    head not present - Penetrance (percentage of animals/eggs on slide): less than 30%

    thorax not present - Penetrance (percentage of animals/eggs on slide): less than 30%
    abdomen not present - Penetrance (percentage of animals/eggs on slide): less than 30%
    affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): 30% - 50%
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 10.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 20.0% (includes death as larva, prepupa, pupa, adult)

    larva lethality - Number of animals showing the phenotype: 1 (11 dpi)
    Days post injection


    eclosion not fulfilled (died as pupa) - Number of animals showing the phenotype: 1 (16 dpi)
    Days post injection


    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC031929 RA
      MGKSASKLK KRKETKLSW TQRFGSLPL 
      RSKSRINKA NNVSFSDSK NAKHIDITQ 
      WLKRMELGQ YESLFQKFN GVEDLLEFS 
      EADLKDLGV KISSHRAMI ISSLTILRA 
      KYHGNFRRQ PSIRHSVAV DKTITIEET 
      DKLSNLSSV YEPVQSKSL NNLIMVSIL 
      LSP
    • >TC031929 RB
      MEPTADPSM NSLELKKAL EWELSLDSR DLRSHAWYH 
      GAIPRSRAE DIVREEGGF LVRDCTSQP GNYVLTCRT 
      KTQPLHFVI NKIILQPDT VYEHVQFQF EEDAFDTVP 
      DLITFYVGS GKPITAASG ARIQFPKNR MYPLSFYAA 
      KYPTPLPQS RLSSPATTP IGGMGMGYR HSPLHPTRP 
      SSSPTRSTR EAPPRLPNK KQRSQSLTP SEVNRISQE 
      KCNSADGVI QSPLMTRSA GADLINSGL KFSTHSLPR 
      SPNTKLSLS ASSNTLGRN CRITSDPTL SPCAEKKFF 
      NESDSGISD SPPPKPSRV PSIIRLESK ESDSSDGKI 
      SEFLPHGNL QRVTSYHAS GSDSGNGSG DSALSSAAG 
      DAIESNQRN SGVVIKNPR YNIVTSESS TTLKNFEID 
      YAEAEEKLL KMIQPEINL GSRFDLENF HTLLLPVNE 
      NKPLDTQAL RGVKMMLQE SGPRILANH LTRTDLDVI 
      FHKPKDAVQ ARLASGIEL CALPHGHQF RVDLIERTE 
      CLKLLVAVT ILTCTEEFE RTEMLNKWI EVAIDTKTA 
      LGNLFGFCG IMLGLCLPQ VEKLDTTWH MLRQKYTDS 
      AFNFEAKLR PTLKNMNSC SNPQAPNTT IPHLLPLIL 
      LHERTLDDF ITPTEHNQL TTSCLGLWE SNTQDFGLT 
      TLLNHLETA RKYMDSSAS YQRNAEIVL GEARMEELT 
      LDMFRTEFQ MKFLWGSRG TFVPADERH SKFEQVLSA 
      IADKYCSLR DDAEV
    • >TC031929 RC
      MNSLELKKA LEWELSLDS RDLRSHAWY HGAIPRSRA 
      EDIVREEGG FLVRDCTSQ PGNYVLTCR TKTQPLHFV 
      INKIILQPD TVYEHVQFQ FEEDAFDTV PDLITFYVG 
      SGKPITAAS GARIQFPKN RMYPLSFYA AKYPTPLPQ 
      SRLSSPATT PIGGMGMGY RHSPLHPTR PSSSPTRST 
      REAPPRLPN KKQRSQSLT PSEVNRISQ EKCNSADGV 
      IQSPLMTRS AGADLINSG LKFSTHSLP RSPNTKLSL 
      SASSNTLGR NCRITSDPT LSPCAEKKF FNESDSGIS 
      DSPPPKPSR VPSIIRLES KESDSSDGK ISEFLPHGN 
      LQRVTSYHA SGSDSGNGS GDSALSSAA GDAIESNQR 
      NSGVVIKNP RYNIVTSES STTLKNFEI DYAEAEEKL 
      LKMIQPEIN LGSRFDLEN FHTLLLPVN ENKPLDTQA 
      LRGVKMMLQ ESGPRILAN HLTRTDLDV IFHKPKDAV 
      QARLASGIE LCALPHGHQ FRVDLIERT ECLKLLVAV 
      TILTCTEEF ERTEMLNKW IEVAIDTKT ALGNLFGFC 
      GIMLGLCLP QVEKLDTTW HMLRQKYTD SAFNFEAKL 
      RPTLKNMNS CSNPQAPNT TIPHLLPLI LLHERTLDD 
      FITPTEHNQ LTTSCLGLW ESNTQDFGL TTLLNHLET 
      ARKYMDSSA SYQRNAEIV LGEARMEEL TLDMFRTEF 
      QMKFLWGSR GTFVPADER HSKFEQVLS AIADKYCSL 
      RDDAEV
    • >TC031929 RD
      MGKSASKLK KRKETKLSW TQRFGSLPL RSKSRINKA 
      NNVSFSDSK NAKHIDITQ WLKRMELGQ YESLFQKFN 
      GVEDLLEFS EADLKDLGV KISSHRAMI ISSLTILRA 
      KYHGNFRRQ PSIRHSVAV DKTITIEET DKFELVKIR 
      FSTSSSLHI AEEFQFTKL SDPVLRFDT GELKTSPEG 
      SAKKFKNSL RKKKTEKKG GPLFICFGG GCALGQINK 
      LGLRAVGVC QTHTHTVYS GNEIKEIAA AFAYSDR
    CDS sequence
    • >TC031929 RA
      atggggaaa tcagccagt aaactgaag aaaaggaag 
      gaaaccaaa ttatcttgg acccagagg tttggttcc 
      cttccgctg cgatcgaaa tcgcgtatc aataaagcc 
      aacaatgtg tccttcagt gacagcaaa aatgcgaaa 
      cacatcgat attacccaa tggttaaaa agaatggaa 
      cttggacaa tacgagagc ttgtttcag aaattcaac 
      ggggttgag gatctctta gaattttcc gaagccgat 
      ctgaaggat ttaggagtg aaaatatcg tcgcacaga 
      gcgatgatt atcagcagt ttgacgatt ttaagagcg 
      aaatatcat ggaaatttt cggagacaa ccttcgatc 
      cgacacagc gtggctgtg gataaaacc atcacgatt 
      gaagaaacc gacaaatta tcgaattta agctccgta 
      tatgagcca gtccaaagt aaaagctta aacaatctc 
      attatggta agtatttta ttgtctccg taa
    • >TC031929 RB
      atggagcct acggcggac ccctcgatg aactctctc 
      gagctgaaa aaagctctc gaatgggag ctttctctg 
      gacagtcgc gacttgcgt tcacacgct tggtatcac 
      ggagccatt cctcgatcc cgtgccgag gacattgtc 
      cgagaggaa ggcggcttt ttagtccgg gactgcact 
      tcccaaccc ggcaattac gtcctaact tgccgaacg 
      aaaacccaa cccttgcac tttgtaatc aacaaaatc 
      atcctccag ccggacacg gtgtacgaa cacgtccaa 
      ttccagttt gaagaggat gctttcgac accgtcccc 
      gaccttatc accttttat gtgggctcg ggaaagccc 
      atcacggca gcgtctggg gccagaata cagtttccg 
      aaaaatcgg atgtacccc ttgtcgttc tacgctgcc 
      aaatacccc acacctctg ccccagagc aggctgagc 
      tccccggca acgacccca atcggggga atgggtatg 
      gggtaccgc cacagcccc ctacacccc acacggccc 
      tcatcgtcc cccacgcgg agcacccga gaggccccc 
      ccgagactc cccaacaag aaacaaaga tcacaatcg 
      ttaaccccc tccgaagtc aatagaata tcgcaagaa 
      aagtgcaac agcgctgat ggtgttata caatcaccc 
      cttatgaca cgctcagcg ggggctgat ctgatcaat 
      tctgggtta aaattctca actcattcc ctcccccgc 
      agccccaac accaaactg tccctttcg gcaagttcc 
      aacactttg gggcgaaat tgccggatt actagcgac 
      cccacgttg tctccttgt gccgaaaag aaatttttc 
      aatgagagt gactccgga atttcggat tccccacct 
      ccaaaaccc tcccgagtt cctagtatc atacgtctc 
      gaatcgaaa gaatcagac agtagtgac ggtaaaatc 
      tccgaattc ttgccccat ggaaattta caaagggtc 
      acatcgtac cacgcgtcc ggatcggac tccggaaac 
      ggttccggg gattcggca ctcagttcc gcggcgggt 
      gatgcgatt gaaagcaat caaagaaac tccggagtg 
      gttattaaa aacccacga tataacata gtaacgtcc 
      gaatcatca acgacttta aagaatttc gagattgac 
      tatgccgaa gcagaagag aagctcttg aagatgata 
      cagccggaa attaatctt gggagtagg tttgacctt 
      gagaatttt cacacgctc ctattgccg gtgaatgag 
      aataagcca ttggacacg caggctttg agaggggtt 
      aaaatgatg ctacaagag tccggacca cggatttta 
      gcgaatcat ttgacgagg actgacttg gacgtgatt 
      tttcataaa ccgaaagat gcggttcaa gcgagacta 
      gcgagtggg attgagttg tgtgcgctt ccgcatgga 
      catcagttc agggtggat ttaattgaa agaacggaa 
      tgtctgaaa ctgctcgta gcggtaaca attttaaca 
      tgtaccgaa gagttcgaa cggaccgaa atgctaaat 
      aagtggatc gaagtagcg atagacacg aagacagcc 
      ctcggaaat ctcttcggt ttttgcggg atcatgtta 
      ggtttatgt ttgccacag gtggaaaaa ctcgacacg 
      acgtggcac atgctgaga cagaaatac accgattcg 
      gcgttcaat ttcgaagcg aaactacga ccaacttta 
      aaaaatatg aacagttgc tcaaatcct caggcacca 
      aatacgaca attcctcac ttattgcca ttaatattg 
      ctccacgag cgcacttta gatgatttt atcacaccc 
      acggaacac aatcagtta actacgagt tgtctgggc 
      ttgtgggaa tcgaacacc caagacttt ggtcttacc 
      actttactt aatcatctg gaaactgcc aggaaatat 
      atggactca agtgcttct taccaaaga aatgccgaa 
      atcgtgcta ggggaagcg aggatggag gaattgaca 
      ctggatatg tttagaaca gagtttcag atgaaattc 
      ttgtggggg agtagaggg acttttgtt ccggctgat 
      gaaagacat tcgaagttc gaacaagtg ctctcagcc 
      attgccgac aagtactgc agtctaaga gacgatgct 
      gaagtgtag
    • >TC031929 RC
      atgaactct ctcgagctg aaaaaagct ctcgaatgg 
      gagctttct ctggacagt cgcgacttg cgttcacac 
      gcttggtat cacggagcc attcctcga tcccgtgcc 
      gaggacatt gtccgagag gaaggcggc tttttagtc 
      cgggactgc acttcccaa cccggcaat tacgtccta 
      acttgccga acgaaaacc caacccttg cactttgta 
      atcaacaaa atcatcctc cagccggac acggtgtac 
      gaacacgtc caattccag tttgaagag gatgctttc 
      gacaccgtc cccgacctt atcaccttt tatgtgggc 
      tcgggaaag cccatcacg gcagcgtct ggggccaga 
      atacagttt ccgaaaaat cggatgtac cccttgtcg 
      ttctacgct gccaaatac cccacacct ctgccccag 
      agcaggctg agctccccg gcaacgacc ccaatcggg 
      ggaatgggt atggggtac cgccacagc cccctacac 
      cccacacgg ccctcatcg tcccccacg cggagcacc 
      cgagaggcc cccccgaga ctccccaac aagaaacaa 
      agatcacaa tcgttaacc ccctccgaa gtcaataga 
      atatcgcaa gaaaagtgc aacagcgct gatggtgtt 
      atacaatca ccccttatg acacgctca gcgggggct 
      gatctgatc aattctggg ttaaaattc tcaactcat 
      tccctcccc cgcagcccc aacaccaaa ctgtccctt 
      tcggcaagt tccaacact ttggggcga aattgccgg 
      attactagc gaccccacg ttgtctcct tgtgccgaa 
      aagaaattt ttcaatgag agtgactcc ggaatttcg 
      gattcccca cctccaaaa ccctcccga gttcctagt 
      atcatacgt ctcgaatcg aaagaatca gacagtagt 
      gacggtaaa atctccgaa ttcttgccc catggaaat 
      ttacaaagg gtcacatcg taccacgcg tccggatcg 
      gactccgga aacggttcc ggggattcg gcactcagt 
      tccgcggcg ggtgatgcg attgaaagc aatcaaaga 
      aactccgga gtggttatt aaaaaccca cgatataac 
      atagtaacg tccgaatca tcaacgact ttaaagaat 
      ttcgagatt gactatgcc gaagcagaa gagaagctc 
      ttgaagatg atacagccg gaaattaat cttgggagt 
      aggtttgac cttgagaat tttcacacg ctcctattg 
      ccggtgaat gagaataag ccattggac acgcaggct 
      ttgagaggg gttaaaatg atgctacaa gagtccgga 
      ccacggatt ttagcgaat catttgacg aggactgac 
      ttggacgtg atttttcat aaaccgaaa gatgcggtt 
      caagcgaga ctagcgagt gggattgag ttgtgtgcg 
      cttccgcat ggacatcag ttcagggtg gatttaatt 
      gaaagaacg gaatgtctg aaactgctc gtagcggta 
      acaatttta acatgtacc gaagagttc gaacggacc 
      gaaatgcta aataagtgg atcgaagta gcgatagac 
      acgaagaca gccctcgga aatctcttc ggtttttgc 
      gggatcatg ttaggttta tgtttgcca caggtggaa 
      aaactcgac acgacgtgg cacatgctg agacagaaa 
      tacaccgat tcggcgttc aatttcgaa gcgaaacta 
      cgaccaact ttaaaaaat atgaacagt tgctcaaat 
      cctcaggca ccaaatacg acaattcct cacttattg 
      ccattaata ttgctccac gagcgcact ttagatgat 
      tttatcaca cccacggaa cacaatcag ttaactacg 
      agttgtctg ggcttgtgg gaatcgaac acccaagac 
      tttggtctt accacttta cttaatcat ctggaaact 
      gccaggaaa tatatggac tcaagtgct tcttaccaa 
      agaaatgcc gaaatcgtg ctaggggaa gcgaggatg 
      gaggaattg acactggat atgtttaga acagagttt 
      cagatgaaa ttcttgtgg gggagtaga gggactttt 
      gttccggct gatgaaaga cattcgaag ttcgaacaa 
      gtgctctca gccattgcc gacaagtac tgcagtcta 
      agagacgat gctgaagtg tag
    • >TC031929 RD
      atggggaaa tcagccagt aaactgaag aaaaggaag 
      gaaaccaaa ttatcttgg acccagagg tttggttcc 
      cttccgctg cgatcgaaa tcgcgtatc aataaagcc 
      aacaatgtg tccttcagt gacagcaaa aatgcgaaa 
      cacatcgat attacccaa tggttaaaa agaatggaa 
      cttggacaa tacgagagc ttgtttcag aaattcaac 
      ggggttgag gatctctta gaattttcc gaagccgat 
      ctgaaggat ttaggagtg aaaatatcg tcgcacaga 
      gcgatgatt atcagcagt ttgacgatt ttaagagcg 
      aaatatcat ggaaatttt cggagacaa ccttcgatc 
      cgacacagc gtggctgtg gataaaacc atcacgatt 
      gaagaaacc gacaaattt gaactcgtc aaaattcga 
      ttctccaca tcctcgtca ttgcacatt gccgaagaa 
      ttccaattt accaaattg tccgatcca gtcctgcgg 
      tttgatacc ggtgagttg aaaacatcc cccgaaggc 
      agcgcgaaa aaattcaaa aactcgctt cggaaaaaa 
      aaaacagaa aaaaagggt ggaccttta tttatatgt 
      ttcggtggc ggctgcgcc ctcggccaa atcaataaa 
      ttggggctc cgagcggtg ggggtgtgt caaacacac 
      acacacaca gtgtatagt ggtaacgaa atcaaagag 
      atagctgcc gccttcgcg tactcggac cgatga
    mRNA sequence
    • >TC031929 RA
      agtgatata agacggtac acgttttgt atgccacac 
      acaaacggc tacgaacaa agtcggtaa atgttgaaa 
      atctgacgg ggacttttc attaatatg cgtccttgt 
      tgacgtagt catagcttg tttattgcc atcgtgttg 
      caagtgtaa acttcagta gttttaaca atgttcgcc 
      aatagatca gtgggtgcg tgtacagtt aagtgacaa 
      agtgaccac cgccaaatt tttcaaagt gaatacaaa 
      tttgacaaa gcgaccacc tcgactaac gaaattttg 
      tttacgtat tttgtggta aaatcaaca aattgggac 
      ccgaaaccg gttctggtc caaaaataa cccaaaaac 
      taaccgtct caggtattt tatagaaca cgatatctt 
      atgataatt gccggtgta taaagcagg aaattatta 
      aaattttaa ttttttgaa ctagacacg gtgttcaga 
      atcaattaa caattggtt tacacaatt tgtggtatc 
      atttctgaa aattttaaa tttaaaata aagtgtttg 
      tatattgtt acgtcagta gaaggcaga tttatgggt 
      atgattcaa ttattcttg atatgagat gacttatca 
      ggtttatta atgtgtgat cttaatctt tttgtaaat 
      atgcaatta gtccaggct ttagtcatc attttcgac 
      attttttta gtccacaat tctaattca tttattcta 
      ataagtaat gcttatttt acataaaag cgtccgaag 
      cggcacatt tacaattcc ttcaacgtg taaacacat 
      caatgtcaa attatttca acagcagtt acagatatt 
      gattcacca atttacatc cgttagaat ttttgtgtc 
      acaacttgg aataaaagt aaatccgct tccaggttc 
      atgaacttt atggtagct acaatatat ggttatttt 
      tattaattt ttaatttgg tagtccaat cgcaaacaa 
      tttatgcga tcacatcta ttatttcaa caagctgcc 
      aattgtttg ttctttacg aatcgatta caataattg 
      aaatctgag agcatcgct ttaaaataa attcctgtc 
      actatttat gatgtaatg atgtgaatt tacgcccat 
      tattttaaa tgaaaaaaa ttagcatgt aacatctcc 
      acccacaca atccatggt atcacagca gtgggcagg 
      agcaagggc atgacaaca ctatttgaa tacattgat 
      acttgaata aatttggct tatctttga agaaaaaaa 
      gaaatcgtc catttcctt gtgccctca ccttgactc 
      caataatac ctgaaagtg atggttttt atgaacttt 
      aaaagccgg catttacca taacaatgg cacttttca 
      agtattgaa tactggcgc cttcgtagg tcgctgttt 
      caagaagaa aaactctcc aattctatg cagaattgt 
      aacggacag taattaata aatttgtgt ttgttgttt 
      gagggaaac atttttaaa attgccaag ataaatgcc 
      tcctgtgtc ccttctact gttcttgtg attgtgcac 
      aaccccatg tgtccagtg tcaaggagg ggcagcaga 
      tcttccggt ctgttttac aaaatgagc atttcgtct 
      tgaaacata atacttcct ccgcctaaa acagtccca 
      tcgcggtat tccaacatg caacagaaa cttggtcgc 
      attacaaat tgtaggtgg tcgacttgt cgcggctta 
      aacatgtca cgaatgtaa tttgcaatt atgcgtgtt 
      ttggattat tatctaatc gggcgtttt tgaagataa 
      agtatcgat atatgaggg tgcaaccag gaaaagtga 
      aacatgttg atgtaaaac gtgtattgt gtgtttatt 
      caactggga gaatgggga aatcagcca gtaaactga 
      agaaaagga aggaaacca aattatctt ggacccaga 
      ggtttggtt cccttccgc tgcgatcga aatcgcgta 
      tcaataaag ccaacaatg tgtccttca gtgacagca 
      aaaatgcga aacacatcg atattaccc aatggttaa 
      aaagaatgg aacttggac aatacgaga gcttgtttc 
      agaaattca acggggttg aggatctct tagaatttt 
      ccgaagccg atctgaagg atttaggag tgaaaatat 
      cgtcgcaca gagcgatga ttatcagca gtttgacga 
      ttttaagag cgaaatatc atggaaatt ttcggagac 
      aaccttcga tccgacaca gcgtggctg tggataaaa 
      ccatcacga ttgaagaaa ccgacaaat tatcgaatt 
      taagctccg tatatgagc cagtccaaa gtaaaagct 
      taaacaatc tcattatgg taagtattt tattgtctc 
      cgtaaaaat atcattttg taaaattga cccgagaga 
      cttgctcct aataccggc ccaatccaa taaaccttg 
      aaaaaaatt aagtttgaa ttttatttc caactgaca 
      tgaaatacc caatgactg tgccacttg gaattccaa 
      acagttggc ccaaagctc cgagctggg ttcatacta 
      gccccagta taaggcccc tgaaatata acaatttga 
      aatccaact cgaaacgag attatttca gtaatacag 
      ctgtgatat ttaagagaa agacgatga ttccgatcc 
      tcaaagaaa ccgaatctc ctttagcat aattcctcg 
      gatcccacg cggcgcaga ttgccactg ccataataa 
      acgttgcta taaatt
    • >TC031929 RB
      cggaattaa ttaatgcat tcatttagt tgtggcatg 
      tgacgggcc aagaaaaaa aagtgttgt ttttgatat 
      cgggagaaa tgtcggtaa cgcgctttt taattaatg 
      gctctggcg tttaattgt ccagctgcg atgtaaagt 
      gacgcaatg gatcataag tgaaatgct ttgaagtca 
      aatggactg aatcggggg tcagcgatt ttttaagga 
      tcgaattta agctccgta tatgagcca gtccaaagt 
      aaaagctta aacaatctc attatggag cctacggcg 
      gacccctcg atgaactct ctcgagctg aaaaaagct 
      ctcgaatgg gagctttct ctggacagt cgcgacttg 
      cgttcacac gcttggtat cacggagcc attcctcga 
      tcccgtgcc gaggacatt gtccgagag gaaggcggc 
      tttttagtc cgggactgc acttcccaa cccggcaat 
      tacgtccta acttgccga acgaaaacc caacccttg 
      cactttgta atcaacaaa atcatcctc cagccggac 
      acggtgtac gaacacgtc caattccag tttgaagag 
      gatgctttc gacaccgtc cccgacctt atcaccttt 
      tatgtgggc tcgggaaag cccatcacg gcagcgtct 
      ggggccaga atacagttt ccgaaaaat cggatgtac 
      cccttgtcg ttctacgct gccaaatac cccacacct 
      ctgccccag agcaggctg agctccccg gcaacgacc 
      ccaatcggg ggaatgggt atggggtac cgccacagc 
      cccctacac cccacacgg ccctcatcg tcccccacg 
      cggagcacc cgagaggcc cccccgaga ctccccaac 
      aagaaacaa agatcacaa tcgttaacc ccctccgaa 
      gtcaataga atatcgcaa gaaaagtgc aacagcgct 
      gatggtgtt atacaatca ccccttatg acacgctca 
      gcgggggct gatctgatc aattctggg ttaaaattc 
      tcaactcat tccctcccc cgcagcccc aacaccaaa 
      ctgtccctt tcggcaagt tccaacact ttggggcga 
      aattgccgg attactagc gaccccacg ttgtctcct 
      tgtgccgaa aagaaattt ttcaatgag agtgactcc 
      ggaatttcg gattcccca cctccaaaa ccctcccga 
      gttcctagt atcatacgt ctcgaatcg aaagaatca 
      gacagtagt gacggtaaa atctccgaa ttcttgccc 
      catggaaat ttacaaagg gtcacatcg taccacgcg 
      tccggatcg gactccgga aacggttcc ggggattcg 
      gcactcagt tccgcggcg ggtgatgcg attgaaagc 
      aatcaaaga aactccgga gtggttatt aaaaaccca 
      cgatataac atagtaacg tccgaatca tcaacgact 
      ttaaagaat ttcgagatt gactatgcc gaagcagaa 
      gagaagctc ttgaagatg atacagccg gaaattaat 
      cttgggagt aggtttgac cttgagaat tttcacacg 
      ctcctattg ccggtgaat gagaataag ccattggac 
      acgcaggct ttgagaggg gttaaaatg atgctacaa 
      gagtccgga ccacggatt ttagcgaat catttgacg 
      aggactgac ttggacgtg atttttcat aaaccgaaa 
      gatgcggtt caagcgaga ctagcgagt gggattgag 
      ttgtgtgcg cttccgcat ggacatcag ttcagggtg 
      gatttaatt gaaagaacg gaatgtctg aaactgctc 
      gtagcggta acaatttta acatgtacc gaagagttc 
      gaacggacc gaaatgcta aataagtgg atcgaagta 
      gcgatagac acgaagaca gccctcgga aatctcttc 
      ggtttttgc gggatcatg ttaggttta tgtttgcca 
      caggtggaa aaactcgac acgacgtgg cacatgctg 
      agacagaaa tacaccgat tcggcgttc aatttcgaa 
      gcgaaacta cgaccaact ttaaaaaat atgaacagt 
      tgctcaaat cctcaggca ccaaatacg acaattcct 
      cacttattg ccattaata ttgctccac gagcgcact 
      ttagatgat tttatcaca cccacggaa cacaatcag 
      ttaactacg agttgtctg ggcttgtgg gaatcgaac 
      acccaagac tttggtctt accacttta cttaatcat 
      ctggaaact gccaggaaa tatatggac tcaagtgct 
      tcttaccaa agaaatgcc gaaatcgtg ctaggggaa 
      gcgaggatg gaggaattg acactggat atgtttaga 
      acagagttt cagatgaaa ttcttgtgg gggagtaga 
      gggactttt gttccggct gatgaaaga cattcgaag 
      ttcgaacaa gtgctctca gccattgcc gacaagtac 
      tgcagtcta agagacgat gctgaagtg tagtgatgt 
      ttattgtga tcaaattgt acatattca tatagcaaa 
      cgggcctaa caggttgca gcataattg atccgaatt 
      aaacagttt catttcaca aaactagag gcggattaa 
      cattgaaac ttgattgca ttatattac aaaaacagc 
      tcgtcaaaa aaattctaa actaggttc tttctaaat 
      tacacctta aggcaacga aaagggaag accaaattt 
      gaatttgtt ttagtcgtt tttacataa aaaagtgaa 
      acatacata aaatataaa taagtaaaa aatcatgag 
      aatcttaga ttagcttta aaactttaa attagcctt 
      aaaaacata aataattta acccgcctc tggcaaaga 
      ctgattaga gtacataat attcgattc caattaacc 
      aaatttgaa aatacgtcc attaaaaag aagagaaat 
      aaaaaataa cgtaataaa aataacaaa cgatgctca 
      agtgtgttt ttgctaatc atcagtact taaagctgc 
      gagaattat gctgtgact ttcggttca actttcttt 
      ttttacata tcaaaattg ttagacttt tttttaatg 
      tttcgtgaa caaccaaaa ataacctcc acaacacca 
      aaacgtttg gttatacga aatttaggt catgtaaaa 
      aaataagct ttaatctgt aattattag attttagag 
      ttttataaa aggtgctca ttgtaagac atgtggtca 
      tagaatcaa aaaaaaact aattataaa tccttattt 
      atcttggat tattgacaa tacaatata aagactgcc
    • >TC031929 RC
      actctattg aatatccct tcgcttccg gatttattg 
      aatttcaac taaaatatt cttttcagg agcctacgg 
      cggacccct cgatgaact ctctcgagc tgaaaaaag 
      ctctcgaat gggagcttt ctctggaca gtcgcgact 
      tgcgttcac acgcttggt atcacggag ccattcctc 
      gatcccgtg ccgaggaca ttgtccgag aggaaggcg 
      gctttttag tccgggact gcacttccc aacccggca 
      attacgtcc taacttgcc gaacgaaaa cccaaccct 
      tgcactttg taatcaaca aaatcatcc tccagccgg 
      acacggtgt acgaacacg tccaattcc agtttgaag 
      aggatgctt tcgacaccg tccccgacc ttatcacct 
      tttatgtgg gctcgggaa agcccatca cggcagcgt 
      ctggggcca gaatacagt ttccgaaaa atcggatgt 
      accccttgt cgttctacg ctgccaaat accccacac 
      ctctgcccc agagcaggc tgagctccc cggcaacga 
      ccccaatcg ggggaatgg gtatggggt accgccaca 
      gccccctac accccacac ggccctcat cgtccccca 
      cgcggagca cccgagagg cccccccga gactcccca 
      acaagaaac aaagatcac aatcgttaa ccccctccg 
      aagtcaata gaatatcgc aagaaaagt gcaacagcg 
      ctgatggtg ttatacaat cacccctta tgacacgct 
      cagcggggg ctgatctga tcaattctg ggttaaaat 
      tctcaactc attccctcc cccgcagcc ccaacacca 
      aactgtccc tttcggcaa gttccaaca ctttggggc 
      gaaattgcc ggattacta gcgacccca cgttgtctc 
      cttgtgccg aaaagaaat ttttcaatg agagtgact 
      ccggaattt cggattccc cacctccaa aaccctccc 
      gagttccta gtatcatac gtctcgaat cgaaagaat 
      cagacagta gtgacggta aaatctccg aattcttgc 
      cccatggaa atttacaaa gggtcacat cgtaccacg 
      cgtccggat cggactccg gaaacggtt ccggggatt 
      cggcactca gttccgcgg cgggtgatg cgattgaaa 
      gcaatcaaa gaaactccg gagtggtta ttaaaaacc 
      cacgatata acatagtaa cgtccgaat catcaacga 
      ctttaaaga atttcgaga ttgactatg ccgaagcag 
      aagagaagc tcttgaaga tgatacagc cggaaatta 
      atcttggga gtaggtttg accttgaga attttcaca 
      cgctcctat tgccggtga atgagaata agccattgg 
      acacgcagg ctttgagag gggttaaaa tgatgctac 
      aagagtccg gaccacgga ttttagcga atcatttga 
      cgaggactg acttggacg tgatttttc ataaaccga 
      aagatgcgg ttcaagcga gactagcga gtgggattg 
      agttgtgtg cgcttccgc atggacatc agttcaggg 
      tggatttaa ttgaaagaa cggaatgtc tgaaactgc 
      tcgtagcgg taacaattt taacatgta ccgaagagt 
      tcgaacgga ccgaaatgc taaataagt ggatcgaag 
      tagcgatag acacgaaga cagccctcg gaaatctct 
      tcggttttt gcgggatca tgttaggtt tatgtttgc 
      cacaggtgg aaaaactcg acacgacgt ggcacatgc 
      tgagacaga aatacaccg attcggcgt tcaatttcg 
      aagcgaaac tacgaccaa ctttaaaaa atatgaaca 
      gttgctcaa atcctcagg caccaaata cgacaattc 
      ctcacttat tgccattaa tattgctcc acgagcgca 
      ctttagatg attttatca cacccacgg aacacaatc 
      agttaacta cgagttgtc tgggcttgt gggaatcga 
      acacccaag actttggtc ttaccactt tacttaatc 
      atctggaaa ctgccagga aatatatgg actcaagtg 
      cttcttacc aaagaaatg ccgaaatcg tgctagggg 
      aagcgagga tggaggaat tgacactgg atatgttta 
      gaacagagt ttcagatga aattcttgt gggggagta 
      gagggactt ttgttccgg ctgatgaaa gacattcga 
      agttcgaac aagtgctct cagccattg ccgacaagt 
      actgcagtc taagagacg atgctgaag tgtagtgat 
      gtttattgt gatcaaatt gtacatatt catatagca 
      aacgggcct aacaggttg cagcataat tgatccgaa 
      ttaaacagt ttcatttca caaaactag aggcggatt 
      aacattgaa acttgattg cattatatt acaaaaaca 
      gctcgtcaa aaaaattct aaactaggt tctttctaa 
      attacacct taaggcaac gaaaaggga agaccaaat 
      ttgaatttg ttttagtcg tttttacat aaaaaagtg 
      aaacataca taaaatata aataagtaa aaaatcatg 
      agaatctta gattagctt taaaacttt aaattagcc 
      ttaaaaaca taaataatt taacccgcc tctggcaaa 
      gactgatta gagtacata atattcgat tccaattaa 
      ccaaatttg aaaatacgt ccattaaaa agaagagaa 
      ataaaaaat aacgtaata aaaataaca aacgatgct 
      caagtgtgt ttttgctaa tcatcagta cttaaagct 
      gcgagaatt atgctgtga ctttcggtt caactttct 
      ttttttaca tatcaaaat tgttagact tttttttaa 
      tgtttcgtg aacaaccaa aaataacct ccacaacac 
      caaaacgtt tggttatac gaaatttag gtcatgtaa 
      aaaaataag ctttaatct gtaattatt agattttag 
      agttttata aaaggtgct cattgtaag acatgtggt 
      catagaatc aaaaaaaaa ctaattata aatccttat 
      ttatcttgg attattgac aatacaata taaagactg 
      cc
    • >TC031929 RD
      agtgatata agacggtac acgttttgt atgccacac 
      acaaacggc tacgaacaa agtcggtaa atgttgaaa 
      atctgacgg ggacttttc attaatatg cgtccttgt 
      tgacgtagt catagcttg tttattgcc atcgtgttg 
      caagtgtaa acttcagta gttttaaca atgttcgcc 
      aatagatca gtgggtgcg tgtacagtt aagtgacaa 
      agtgaccac cgccaaatt tttcaaagt gaatacaaa 
      tttgacaaa gcgaccacc tcgactaac gaaattttg 
      tttacgtat tttgtggta aaatcaaca aattgggac 
      ccgaaaccg gttctggtc caaaaataa cccaaaaac 
      taaccgtct caggtattt tatagaaca cgatatctt 
      atgataatt gccggtgta taaagcagg aaattatta 
      aaattttaa ttttttgaa ctagacacg gtgttcaga 
      atcaattaa caattggtt tacacaatt tgtggtatc 
      atttctgaa aattttaaa tttaaaata aagtgtttg 
      tatattgtt acgtcagta gaaggcaga tttatgggt 
      atgattcaa ttattcttg atatgagat gacttatca 
      ggtttatta atgtgtgat cttaatctt tttgtaaat 
      atgcaatta gtccaggct ttagtcatc attttcgac 
      attttttta gtccacaat tctaattca tttattcta 
      ataagtaat gcttatttt acataaaag cgtccgaag 
      cggcacatt tacaattcc ttcaacgtg taaacacat 
      caatgtcaa attatttca acagcagtt acagatatt 
      gattcacca atttacatc cgttagaat ttttgtgtc 
      acaacttgg aataaaagt aaatccgct tccaggttc 
      atgaacttt atggtagct acaatatat ggttatttt 
      tattaattt ttaatttgg tagtccaat cgcaaacaa 
      tttatgcga tcacatcta ttatttcaa caagctgcc 
      aattgtttg ttctttacg aatcgatta caataattg 
      aaatctgag agcatcgct ttaaaataa attcctgtc 
      actatttat gatgtaatg atgtgaatt tacgcccat 
      tattttaaa tgaaaaaaa ttagcatgt aacatctcc 
      acccacaca atccatggt atcacagca gtgggcagg 
      agcaagggc atgacaaca ctatttgaa tacattgat 
      acttgaata aatttggct tatctttga agaaaaaaa 
      gaaatcgtc catttcctt gtgccctca ccttgactc 
      caataatac ctgaaagtg atggttttt atgaacttt 
      aaaagccgg catttacca taacaatgg cacttttca 
      agtattgaa tactggcgc cttcgtagg tcgctgttt 
      caagaagaa aaactctcc aattctatg cagaattgt 
      aacggacag taattaata aatttgtgt ttgttgttt 
      gagggaaac atttttaaa attgccaag ataaatgcc 
      tcctgtgtc ccttctact gttcttgtg attgtgcac 
      aaccccatg tgtccagtg tcaaggagg ggcagcaga 
      tcttccggt ctgttttac aaaatgagc atttcgtct 
      tgaaacata atacttcct ccgcctaaa acagtccca 
      tcgcggtat tccaacatg caacagaaa cttggtcgc 
      attacaaat tgtaggtgg tcgacttgt cgcggctta 
      aacatgtca cgaatgtaa tttgcaatt atgcgtgtt 
      ttggattat tatctaatc gggcgtttt tgaagataa 
      agtatcgat atatgaggg tgcaaccag gaaaagtga 
      aacatgttg atgtaaaac gtgtattgt gtgtttatt 
      caactggga gaatgggga aatcagcca gtaaactga 
      agaaaagga aggaaacca aattatctt ggacccaga 
      ggtttggtt cccttccgc tgcgatcga aatcgcgta 
      tcaataaag ccaacaatg tgtccttca gtgacagca 
      aaaatgcga aacacatcg atattaccc aatggttaa 
      aaagaatgg aacttggac aatacgaga gcttgtttc 
      agaaattca acggggttg aggatctct tagaatttt 
      ccgaagccg atctgaagg atttaggag tgaaaatat 
      cgtcgcaca gagcgatga ttatcagca gtttgacga 
      ttttaagag cgaaatatc atggaaatt ttcggagac 
      aaccttcga tccgacaca gcgtggctg tggataaaa 
      ccatcacga ttgaagaaa ccgacaaat ttgaactcg 
      tcaaaattc gattctcca catcctcgt cattgcaca 
      ttgccgaag aattccaat ttaccaaat tgtccgatc 
      cagtcctgc ggtttgata ccggtgagt tgaaaacat 
      cccccgaag gcagcgcga aaaaattca aaaactcgc 
      ttcggaaaa aaaaaacag aaaaaaagg gtggacctt 
      tatttatat gtttcggtg gcggctgcg ccctcggcc 
      aaatcaata aattggggc tccgagcgg tgggggtgt 
      gtcaaacac acacacaca cagtgtata gtggtaacg 
      aaatcaaag agatagctg ccgccttcg cgtactcgg 
      accgatgat gatgttgat gttcggaat taattaatg 
      cattcattt agttgtggc atgtgacgg gccaagaaa 
      aaaaagtgt tgtttttga tatcgggag aaatgtcgg 
      taacgcgct ttttaatta atggctctg gcgtttaat 
      tgtccagct gcgatgtaa agtgacgca atggatcat 
      aagtgaaat gctttgaag tcaaatgga ctgaatcgg 
      gggtcagcg attttttaa gggtgagtc aatgtaccc 
      ttgagccac atttgcatt gtgatatca cttatcaac 
      ggcttccag aatcacaat aaacttttg ccgtaatt
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY