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Gene information
General information
TC001887 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

scaffold_seqid2: 290338..302652
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC001887
    iBeetle screen iB_03266
    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 80.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 4 (3 dpi)
    Days post injection


    adult lethality - Number of animals showing the phenotype: 4 (9 dpi)
    Days post injection


    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 20
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC001887 RA
      MVCASLVRR RTFKKLFYV VVVFLVRIC PAFMDQGED 
      IPHNEVRNW ALKFGVDLW EYGKMSTRL KELQRKYHD 
      ENIKVARKD GLLLIRDMA KEVQNMMSF KIEAVRRIT 
      ESAEQAALT PQTDNGQPF RYYNAKRLN SFGPDGRPV 
      EGTREMMLT PNPHFDHLP VNTSLSTVL IPPNVEEYD 
      PEVINAIQW SEHLDPLFI HNYEDDPSL SWQFFGSGT 
      GFLRRYPGI AWPPVDMST VWQRPRSSR NVYDFRSSA 
      WYVSAATSP KDIVILIDN SGSMSGHKS NLARATTES 
      ILNTLGDND FVNVFKFSD ITEETVPCF KDMLVQANN 
      ENVRWLKES LSTFKSENI ANFTAALVT GFEILHKYN 
      RTGQGCQCN QAIMLITDG PPSSYQEIF KMYNFPHYP 
      VRIFTYLVG KDSSSAHEM RWMACANKG YYTRIENFD 
      EINQKVLHY IEVLARPMV MYQTDHPIQ WTPAYVGGR 
      ADSFLNDKV GQLITTVTT PVFDRRNHT VRVANLLGV 
      VGTDVSIDQ IKKLVPPYK LGVNGYSFI INNNGHVLY 
      HPDLRPLQN NELYDETLE PQYISVDLT EVELVENEN 
      GPRENHSVL LDLRYDMIQ QKEGETELG VKIHYDNVR 
      RVTTRRHKY FYTPIEGTP FSLGLAIPE RYGMYELLA 
      EQEIKHSQR NVTDYFKGN NWKVHPDWV YCEYTSGTS 
      GEQWFRTAE ERVLHFLSR SRRPGWKWM SLRPRSPSQ 
      REHHHQTTK KDKDAYFCD KNLLQSLVL DAMVTESLE 
      RHHTRTEDD HEGHQIFGK TLTFVATRS GLLRWTDHV 
      TPGEKAQQP HFSETNVKA MDETWYKRA VDQHSIEPE 
      SFVFSVPFD SNLQENPLI TATHAVFVE HNGHRAPAA 
      VVGIQYQHT TLASHFLNI TSKCTGTTT CHKTCASEK 
      LDCYVLDNN GFVIISERS EHTGQFFGQ IDGTIMDSL 
      VQDRIYKKI TVYDYQGAC SNSKSHYSG DAYQVQPFD 
      PIKSFFKYL VKFSWLLLA KIEAAYGTA IAYAQDDEI 
      YPEYDPNFD QFPTGEDVI GEQDPILPP PYTNTPSFI 
      PPYESDPME GVDMSQFGV RPCDRKVDL YVLQPDKLN 
      VSGQSDPLK GKLTNCHVT ACERPFSVQ KIPHSNLIL 
      LVVDTMCPC GSKQFSITP HELIYDTGN GGCLHKPKD 
      SLYRRRPPK CINYHPEES EINICGKAS IPVANVATL 
      LIISAMRYI LAVLS
    • >TC001887 RB
      MVCASLVRR RTFKKLFYV VVVFLVRIC PAFMDQGED 
      IPHNEVRNW ALKFGVDLW EYGKMSTRL KELQRKYHD 
      ENIKVARKD GLLLIRDMA KEVQNMMSF KIEAVRRIT 
      ESAEQAALT PQTDNGQPF RYYNAKRLN SFGPDGRPV 
      EGTREMMLT PNPHFDHLP VNTSLSTVL IPPNVEEYD 
      PEVINAIQW SEHLDPLFI HNYEDDPSL SWQFFGSGT 
      GFLRRYPGI AWPPVDMST VWQRPRSSR NVYDFRSSA 
      WYVSAATSP KDIVILIDN SGSMSGHKS NLARATTES 
      ILNTLGDND FVNVFKFSD ITEETVPCF KDMLVQANN 
      ENVRWLKES LSTFKSENI ANFTAALVT GFEILHKYN 
      RTGQGCQCN QAIMLITDG PPSSYQEIF KMYNFPHYP 
      VRIFTYLVG KDSSSAHEM RWMACANKG YYTRIENFD 
      EINQKVLHY IEVLARPMV MYQTDHPIQ WTPAYVGGR 
      ADSFLNDKV GQLITTVTT PVFDRRNHT VRVANLLGV 
      VGTDVSIDQ IKKLVPPYK LGVNGYSFI INNNGHVLY 
      HPDLRPLQN NELYDETLE PQYISVDLT EVELVENEN 
      GPRENHSVL LDLRYDMIQ QKEGETELG VKIHYDNVR 
      RVTTRRHKY FYTPIEGTP FSLGLAIPE RYGMYELLA 
      EQEIKHSQR NVTDYFKGN NWKVHPDWV YCEYTSGTS 
      GEQWFRTAE ERVLHFLSR SRRPGWKWM SLRPRSPSQ 
      REHHHQTTK KDKDAYFCD KNLLQSLVL DAMVTESLE 
      RHHTRTEDD HEGHQIFGK TLTFVATRS GLLRWTDHV 
      TPGEKAQQP HFSETNVKA MDETWYKRA VDQHSIEPE 
      SFVFSVPFD SNLQENPLI TATHAVFVE HNGHRAPAA 
      VVGIQYQHT TLASHFLNI TSKCTGTTT CHKTCASEK 
      LDCYVLDNN GFVIISERS EHTGQFFGQ IDGTIMDSL 
      VQDRIYKKI TVYDYQGAC SNSKSHYSG DAYQVQPFD 
      PIKSFFKYL VKFSWLLLA KIEAAYGTA IAYAQDDEI 
      YPEYDPNFD QFPTGEDVI GEQDPILPP PYTNTPSFI 
      PPYESDPME GVDMSQFGV RPCDRKVDL YVLQPDKLN 
      VSGQSDPLK GKLTNCHVT ACERPFSVQ KIPHSNLIL 
      LVVDTMCPC GSKQFSITP HELIYDTGN GGCLHKPKD 
      SLYRRRPPK CINYHPEVS RSFCLVGVT IVLLQESEI 
      NICGKASIP VANVATLLI ISAMRYILA VLS
    CDS sequence
    • >TC001887 RA
      atggtgtgt gcgagtctt gtgcgacgc aggaccttc 
      aaaaaacta ttctacgtt gtggtggtt ttcctggtg 
      cgaatatgc cccgctttc atggatcag ggtgaagac 
      atcccccat aacgaagta cggaactgg gcgctcaaa 
      ttcggagtt gatttatgg gagtatgga aaaatgtcc 
      acaagactg aaggagcta cagaggaaa taccacgac 
      gaaaatatc aaagttgca cgaaaagac ggtttactc 
      ttgataaga gacatggcg aaagaagtc cagaatatg 
      atgagcttc aaaattgaa gccgttcgg aggataacc 
      gaatcagct gaacaagct gcactgacg ccacaaaca 
      gataacgga caacccttt cgttattat aacgccaaa 
      agactgaat tcgtttggt cctgatgga cgaccagtc 
      gagggcacg agagaaatg atgctaacg ccgaatcct 
      catttcgac catttacca gttaatact agtcttagt 
      accgttcta atcccacca aatgttgaa gaatacgat 
      cccgaagtt ataaacgcg atccagtgg tccgaacat 
      ttagacccc cttttcata cacaactac gaggacgat 
      ccttccctc tcctggcaa ttcttcggg agcggcacc 
      ggatttcta aggagatat ccaggtatt gcgtggccc 
      cctgtggac atgtcgacg gtctggcag cgtcccaga 
      agctctcga aacgtttac gattttcgc tcctcggcg 
      tggtacgtc tctgcagca acatcgcca aaggatatc 
      gtaatcctt attgacaac tctggctca atgagtggt 
      cataaatct aacctcgcc cgagcaaca accgaatct 
      attttaaat acgttagga gacaacgat ttcgtaaac 
      gttttcaag ttttcggat ataaccgag gaaaccgtt 
      ccctgtttc aaagacatg cttgtgcaa gccaacaac 
      gagaatgtt cgctggttg aaagagtct ctctcgacg 
      tttaaatcg gagaatatt gccaatttt acggcggca 
      cttgttaca ggattcgaa atcttacat aaatataac 
      aggacggga cagggctgt cagtgcaac caagcgatc 
      atgctcatc actgacgga ccaccctcc agttaccag 
      gagattttc aaaatgtac aacttcccg cattaccca 
      gtcagaatt ttcacctac ctcgtgggg aaagactcc 
      agcagcgcg cacgaaatg cgctggatg gcctgcgca 
      aacaaaggc tactacacg aggatagaa aattttgac 
      gaaatcaat caaaaagtc ctccactat atcgaagtc 
      ttagccaga cccatggtc atgtaccag acggatcac 
      cccatccag tggacccct gcatacgtg ggtggtcgg 
      gccgatagc ttcctaaat gacaaagtt ggccaactg 
      ataaccaca gttaccacc ccggtcttc gatcgacgc 
      aaccacacg gtccgagtg gctaatttg ttaggtgtg 
      gttggaacg gatgtgtcg atcgaccaa atcaaaaaa 
      ttggtgccg ccgtataag ctcggtgtt aatggctat 
      tccttcatt atcaataat aacggccac gtgttgtac 
      catcccgac ttgaggcct ttgcaaaat aacgaactg 
      tacgacgaa acactcgaa ccgcagtac atttcagtc 
      gatctgact gaagtcgag ttggtcgaa aacgaaaac 
      gggcctcga gagaaccat tctgttctc ctcgatcta 
      aggtacgac atgatccag caaaaagaa ggggagaca 
      gaattaggg gtcaagatc cactacgac aacgtgcgt 
      cgcgtgaca acacgacgg cacaaatat ttctatacc 
      cccattgag ggcacgcct ttctcgctg ggactagcg 
      atcccggaa cgctacggc atgtatgag ctactagcc 
      gagcaagaa atcaaacac agccaacgg aacgtgacc 
      gattatttc aaaggcaac aactggaaa gtccaccct 
      gattgggtc tactgtgag tacacaagt ggcacctcc 
      ggggagcag tggttccga acggcggag gagcgggtc 
      ttgcatttt ttatcccgg agtagacgt ccggggtgg 
      aaatggatg tctctgcgg ccgcggtcg ccttcgcaa 
      agggagcac caccaccaa acgaccaaa aaggacaaa 
      gatgcctac ttctgcgac aaaaacttg ctccagtcg 
      ctagttctg gacgcgatg gtgactgaa tcgttagaa 
      cgacaccac acgcgaacc gaagacgac cacgagggg 
      caccaaatc tttggaaaa acactgact ttcgttgcc 
      acacgaagc gggttgctt aggtggacc gaccatgtc 
      acacctggc gaaaaggca caacaaccc cattttagc 
      gagacaaac gtgaaagcc atggacgag acgtggtac 
      aagcgtgcc gtcgaccag cactccatc gagcccgaa 
      agtttcgtt ttttccgta cccttcgac agcaattta 
      caggagaat cccctaatc acagcgact catgccgtt 
      tttgtcgaa cataatggc cacagggca ccggctgcc 
      gttgtcgga atacagtac caacacaca actttggct 
      tctcatttc ctaaacatc acctccaag tgcaccggc 
      accacaaca tgccacaaa acgtgcgca agtgaaaag 
      ttggattgc tacgtgctt gacaataat ggtttcgtg 
      ataatttcg gaacggtcc gagcacacg ggccagttc 
      tttggccag atcgacggc actataatg gattcgctg 
      gtccaggac cgcatatac aagaaaata accgtgtat 
      gactaccaa ggagcttgc tccaatagc aaaagtcac 
      tacagtggc gacgcgtat caagtccag ccttttgac 
      ccgatcaag tcatttttc aagtacttg gtcaagttt 
      tcgtggtta ctgcttgcc aaaatcgag gcggcttac 
      ggaactgcg atcgcttac gcccaagac gatgaaatc 
      taccctgag tacgacccc aattttgat caattcccg 
      actggcgaa gacgtgatc ggggagcag gaccccata 
      cttccaccc ccttatacg aatactcct tcctttatc 
      cctccttat gaatccgac cccatggaa ggggtcgat 
      atgagccaa tttggggtc aggccttgc gaccgcaag 
      gtcgacctc tatgtcctc caaccagac aagttgaat 
      gtgagcgga caaagcgac cccttaaag ggcaaactc 
      acgaactgt cacgtaaca gcttgcgaa aggccattt 
      agtgttcag aaaattccg catagtaat ttgattttg 
      ttggttgtg gacaccatg tgtccttgt gggagtaag 
      cagtttagt attacccca catgaactg atatacgat 
      acagggaac ggaggctgt ttgcataaa cctaaggat 
      agtttatat agaagacgt ccaccgaag tgtattaat 
      taccaccct gaggagagt gagataaat atttgtggt 
      aaggcatcg attccagtt gcaaacgtc gcgactttg 
      cttattatc agcgcaatg cgctacatt ttggccgtt 
      ttgtcgtga
    • >TC001887 RB
      atggtgtgt gcgagtctt gtgcgacgc aggaccttc 
      aaaaaacta ttctacgtt gtggtggtt ttcctggtg 
      cgaatatgc cccgctttc atggatcag ggtgaagac 
      atcccccat aacgaagta cggaactgg gcgctcaaa 
      ttcggagtt gatttatgg gagtatgga aaaatgtcc 
      acaagactg aaggagcta cagaggaaa taccacgac 
      gaaaatatc aaagttgca cgaaaagac ggtttactc 
      ttgataaga gacatggcg aaagaagtc cagaatatg 
      atgagcttc aaaattgaa gccgttcgg aggataacc 
      gaatcagct gaacaagct gcactgacg ccacaaaca 
      gataacgga caacccttt cgttattat aacgccaaa 
      agactgaat tcgtttggt cctgatgga cgaccagtc 
      gagggcacg agagaaatg atgctaacg ccgaatcct 
      catttcgac catttacca gttaatact agtcttagt 
      accgttcta atcccacca aatgttgaa gaatacgat 
      cccgaagtt ataaacgcg atccagtgg tccgaacat 
      ttagacccc cttttcata cacaactac gaggacgat 
      ccttccctc tcctggcaa ttcttcggg agcggcacc 
      ggatttcta aggagatat ccaggtatt gcgtggccc 
      cctgtggac atgtcgacg gtctggcag cgtcccaga 
      agctctcga aacgtttac gattttcgc tcctcggcg 
      tggtacgtc tctgcagca acatcgcca aaggatatc 
      gtaatcctt attgacaac tctggctca atgagtggt 
      cataaatct aacctcgcc cgagcaaca accgaatct 
      attttaaat acgttagga gacaacgat ttcgtaaac 
      gttttcaag ttttcggat ataaccgag gaaaccgtt 
      ccctgtttc aaagacatg cttgtgcaa gccaacaac 
      gagaatgtt cgctggttg aaagagtct ctctcgacg 
      tttaaatcg gagaatatt gccaatttt acggcggca 
      cttgttaca ggattcgaa atcttacat aaatataac 
      aggacggga cagggctgt cagtgcaac caagcgatc 
      atgctcatc actgacgga ccaccctcc agttaccag 
      gagattttc aaaatgtac aacttcccg cattaccca 
      gtcagaatt ttcacctac ctcgtgggg aaagactcc 
      agcagcgcg cacgaaatg cgctggatg gcctgcgca 
      aacaaaggc tactacacg aggatagaa aattttgac 
      gaaatcaat caaaaagtc ctccactat atcgaagtc 
      ttagccaga cccatggtc atgtaccag acggatcac 
      cccatccag tggacccct gcatacgtg ggtggtcgg 
      gccgatagc ttcctaaat gacaaagtt ggccaactg 
      ataaccaca gttaccacc ccggtcttc gatcgacgc 
      aaccacacg gtccgagtg gctaatttg ttaggtgtg 
      gttggaacg gatgtgtcg atcgaccaa atcaaaaaa 
      ttggtgccg ccgtataag ctcggtgtt aatggctat 
      tccttcatt atcaataat aacggccac gtgttgtac 
      catcccgac ttgaggcct ttgcaaaat aacgaactg 
      tacgacgaa acactcgaa ccgcagtac atttcagtc 
      gatctgact gaagtcgag ttggtcgaa aacgaaaac 
      gggcctcga gagaaccat tctgttctc ctcgatcta 
      aggtacgac atgatccag caaaaagaa ggggagaca 
      gaattaggg gtcaagatc cactacgac aacgtgcgt 
      cgcgtgaca acacgacgg cacaaatat ttctatacc 
      cccattgag ggcacgcct ttctcgctg ggactagcg 
      atcccggaa cgctacggc atgtatgag ctactagcc 
      gagcaagaa atcaaacac agccaacgg aacgtgacc 
      gattatttc aaaggcaac aactggaaa gtccaccct 
      gattgggtc tactgtgag tacacaagt ggcacctcc 
      ggggagcag tggttccga acggcggag gagcgggtc 
      ttgcatttt ttatcccgg agtagacgt ccggggtgg 
      aaatggatg tctctgcgg ccgcggtcg ccttcgcaa 
      agggagcac caccaccaa acgaccaaa aaggacaaa 
      gatgcctac ttctgcgac aaaaacttg ctccagtcg 
      ctagttctg gacgcgatg gtgactgaa tcgttagaa 
      cgacaccac acgcgaacc gaagacgac cacgagggg 
      caccaaatc tttggaaaa acactgact ttcgttgcc 
      acacgaagc gggttgctt aggtggacc gaccatgtc 
      acacctggc gaaaaggca caacaaccc cattttagc 
      gagacaaac gtgaaagcc atggacgag acgtggtac 
      aagcgtgcc gtcgaccag cactccatc gagcccgaa 
      agtttcgtt ttttccgta cccttcgac agcaattta 
      caggagaat cccctaatc acagcgact catgccgtt 
      tttgtcgaa cataatggc cacagggca ccggctgcc 
      gttgtcgga atacagtac caacacaca actttggct 
      tctcatttc ctaaacatc acctccaag tgcaccggc 
      accacaaca tgccacaaa acgtgcgca agtgaaaag 
      ttggattgc tacgtgctt gacaataat ggtttcgtg 
      ataatttcg gaacggtcc gagcacacg ggccagttc 
      tttggccag atcgacggc actataatg gattcgctg 
      gtccaggac cgcatatac aagaaaata accgtgtat 
      gactaccaa ggagcttgc tccaatagc aaaagtcac 
      tacagtggc gacgcgtat caagtccag ccttttgac 
      ccgatcaag tcatttttc aagtacttg gtcaagttt 
      tcgtggtta ctgcttgcc aaaatcgag gcggcttac 
      ggaactgcg atcgcttac gcccaagac gatgaaatc 
      taccctgag tacgacccc aattttgat caattcccg 
      actggcgaa gacgtgatc ggggagcag gaccccata 
      cttccaccc ccttatacg aatactcct tcctttatc 
      cctccttat gaatccgac cccatggaa ggggtcgat 
      atgagccaa tttggggtc aggccttgc gaccgcaag 
      gtcgacctc tatgtcctc caaccagac aagttgaat 
      gtgagcgga caaagcgac cccttaaag ggcaaactc 
      acgaactgt cacgtaaca gcttgcgaa aggccattt 
      agtgttcag aaaattccg catagtaat ttgattttg 
      ttggttgtg gacaccatg tgtccttgt gggagtaag 
      cagtttagt attacccca catgaactg atatacgat 
      acagggaac ggaggctgt ttgcataaa cctaaggat 
      agtttatat agaagacgt ccaccgaag tgtattaat 
      taccaccct gaggtaagt cgtagtttt tgtttggtg 
      ggagtaacg attgttttg ctgcaggag agtgagata 
      aatatttgt ggtaaggca tcgattcca gttgcaaac 
      gtcgcgact ttgcttatt atcagcgca atgcgctac 
      attttggcc gttttgtcg tga
    mRNA sequence
    • >TC001887 RA
      aatgtagtg agggcggcg tcggcgcaa gaatgcaac 
      ccccaaata gattaggcc gactcgggg tgtgtacta 
      cagcctaaa cgccaccgg tacaattca cccttgctc 
      acggttgaa atgaaatta atatgtgaa aactaagcg 
      aaattagtg cgtgttcga gtggaaaag gcgcaggaa 
      ggcgatgaa aaagcccac ccccggcga gacggatca 
      agatgcccc ttgaagacc gcttaaccc tcgcagatt 
      gaccggaag ttgtgtaaa atcgctgtg aacatggtg 
      tgtgcgagt cttgtgcga cgcaggacc ttcaaaaaa 
      ctattctac gttgtggtg gttttcctg gtgcgaata 
      tgccccgct ttcatggat cagggtgaa gacatcccc 
      cataacgaa gtacggaac tgggcgctc aaattcgga 
      gttgattta tgggagtat ggaaaaatg tccacaaga 
      ctgaaggag ctacagagg aaataccac gacgaaaat 
      atcaaagtt gcacgaaaa gacggttta ctcttgata 
      agagacatg gcgaaagaa gtccagaat atgatgagc 
      ttcaaaatt gaagccgtt cggaggata accgaatca 
      gctgaacaa gctgcactg acgccacaa acagataac 
      ggacaaccc tttcgttat tataacgcc aaaagactg 
      aattcgttt ggtcctgat ggacgacca gtcgagggc 
      acgagagaa atgatgcta acgccgaat cctcatttc 
      gaccattta ccagttaat actagtctt agtaccgtt 
      ctaatccca ccaaatgtt gaagaatac gatcccgaa 
      gttataaac gcgatccag tggtccgaa catttagac 
      ccccttttc atacacaac tacgaggac gatccttcc 
      ctctcctgg caattcttc gggagcggc accggattt 
      ctaaggaga tatccaggt attgcgtgg ccccctgtg 
      gacatgtcg acggtctgg cagcgtccc agaagctct 
      cgaaacgtt tacgatttt cgctcctcg gcgtggtac 
      gtctctgca gcaacatcg ccaaaggat atcgtaatc 
      cttattgac aactctggc tcaatgagt ggtcataaa 
      tctaacctc gcccgagca acaaccgaa tctatttta 
      aatacgtta ggagacaac gatttcgta aacgttttc 
      aagttttcg gatataacc gaggaaacc gttccctgt 
      ttcaaagac atgcttgtg caagccaac aacgagaat 
      gttcgctgg ttgaaagag tctctctcg acgtttaaa 
      tcggagaat attgccaat tttacggcg gcacttgtt 
      acaggattc gaaatctta cataaatat aacaggacg 
      ggacagggc tgtcagtgc aaccaagcg atcatgctc 
      atcactgac ggaccaccc tccagttac caggagatt 
      ttcaaaatg tacaacttc ccgcattac ccagtcaga 
      attttcacc tacctcgtg gggaaagac tccagcagc 
      gcgcacgaa atgcgctgg atggcctgc gcaaacaaa 
      ggctactac acgaggata gaaaatttt gacgaaatc 
      aatcaaaaa gtcctccac tatatcgaa gtcttagcc 
      agacccatg gtcatgtac cagacggat caccccatc 
      cagtggacc cctgcatac gtgggtggt cgggccgat 
      agcttccta aatgacaaa gttggccaa ctgataacc 
      acagttacc accccggtc ttcgatcga cgcaaccac 
      acggtccga gtggctaat ttgttaggt gtggttgga 
      acggatgtg tcgatcgac caaatcaaa aaattggtg 
      ccgccgtat aagctcggt gttaatggc tattccttc 
      attatcaat aataacggc cacgtgttg taccatccc 
      gacttgagg cctttgcaa aataacgaa ctgtacgac 
      gaaacactc gaaccgcag tacatttca gtcgatctg 
      actgaagtc gagttggtc gaaaacgaa aacgggcct 
      cgagagaac cattctgtt ctcctcgat ctaaggtac 
      gacatgatc cagcaaaaa gaaggggag acagaatta 
      ggggtcaag atccactac gacaacgtg cgtcgcgtg 
      acaacacga cggcacaaa tatttctat acccccatt 
      gagggcacg cctttctcg ctgggacta gcgatcccg 
      gaacgctac ggcatgtat gagctacta gccgagcaa 
      gaaatcaaa cacagccaa cggaacgtg accgattat 
      ttcaaaggc aacaactgg aaagtccac cctgattgg 
      gtctactgt gagtacaca agtggcacc tccggggag 
      cagtggttc cgaacggcg gaggagcgg gtcttgcat 
      tttttatcc cggagtaga cgtccgggg tggaaatgg 
      atgtctctg cggccgcgg tcgccttcg caaagggag 
      caccaccac caaacgacc aaaaaggac aaagatgcc 
      tacttctgc gacaaaaac ttgctccag tcgctagtt 
      ctggacgcg atggtgact gaatcgtta gaacgacac 
      cacacgcga accgaagac gaccacgag gggcaccaa 
      atctttgga aaaacactg actttcgtt gccacacga 
      agcgggttg cttaggtgg accgaccat gtcacacct 
      ggcgaaaag gcacaacaa ccccatttt agcgagaca 
      aacgtgaaa gccatggac gagacgtgg tacaagcgt 
      gccgtcgac cagcactcc atcgagccc gaaagtttc 
      gttttttcc gtacccttc gacagcaat ttacaggag 
      aatccccta atcacagcg actcatgcc gtttttgtc 
      gaacataat ggccacagg gcaccggct gccgttgtc 
      ggaatacag taccaacac acaactttg gcttctcat 
      ttcctaaac atcacctcc aagtgcacc ggcaccaca 
      acatgccac aaaacgtgc gcaagtgaa aagttggat 
      tgctacgtg cttgacaat aatggtttc gtgataatt 
      tcggaacgg tccgagcac acgggccag ttctttggc 
      cagatcgac ggcactata atggattcg ctggtccag 
      gaccgcata tacaagaaa ataaccgtg tatgactac 
      caaggagct tgctccaat agcaaaagt cactacagt 
      ggcgacgcg tatcaagtc cagcctttt gacccgatc 
      aagtcattt ttcaagtac ttggtcaag ttttcgtgg 
      ttactgctt gccaaaatc gaggcggct tacggaact 
      gcgatcgct tacgcccaa gacgatgaa atctaccct 
      gagtacgac cccaatttt gatcaattc ccgactggc 
      gaagacgtg atcggggag caggacccc atacttcca 
      cccccttat acgaatact ccttccttt atccctcct 
      tatgaatcc gaccccatg gaaggggtc gatatgagc 
      caatttggg gtcaggcct tgcgaccgc aaggtcgac 
      ctctatgtc ctccaacca gacaagttg aatgtgagc 
      ggacaaagc gacccctta aagggcaaa ctcacgaac 
      tgtcacgta acagcttgc gaaaggcca tttagtgtt 
      cagaaaatt ccgcatagt aatttgatt ttgttggtt 
      gtggacacc atgtgtcct tgtgggagt aagcagttt 
      agtattacc ccacatgaa ctgatatac gatacaggg 
      aacggaggc tgtttgcat aaacctaag gatagttta 
      tatagaaga cgtccaccg aagtgtatt aattaccac 
      cctgaggag agtgagata aatatttgt ggtaaggca 
      tcgattcca gttgcaaac gtcgcgact ttgcttatt 
      atcagcgca atgcgctac attttggcc gttttgtcg 
      tgattgtaa gttatacct aagctaaat acctttaaa 
      acgtaaaga ggcaactat tgttgcatt taatagact 
      acaatgaaa tttcttata taacacgtt catacattt 
      catttactc atatcacaa atcgaagga ttgtattat 
      ttggataga atagagcag ttttttaaa aagtatata 
      tattgacaa aagtcgtaa aaactagtt gaatttttt 
      atataattt ataaaatgt gaaagtaat tttgggtgt 
      atttgtaca tatcaaatg ttgtactat taacctgtg 
      attttcaca aggaaaatc gcgattccg tattattta 
      gattaatgt atttgatta cgacaataa ctttccgtt 
      ggttgattt gtttgaggg aaatgtact gatcgcgca 
      atcggtgtg gtggtgggc gaagttttt gttattttg 
      gcgcgcacc acgggattg agcgacctg taactatga 
      caatactta tagtaaaac tgtgaatat tggcataca 
      ggttacgta gagtagtcg acataatct gctgttgta 
      aataataaa acaaatctg tgtgtcgta cgattagtt 
      caagtctaa atttaataa atacactat ggtagttat 
      gtttgatcg cgttcatat tttctaatt acaattgta 
      agtgccagt ttttctact gacttcatc ctttgttac 
      ttaacatta agacgacaa atctaacga gttctgctt 
      tcgtttggt atgatatgt gtcaaagta tttgtacat 
      tgtaagatt agaatttgt acattacta gatacaatt 
      aatggatga aatttattt caggtactg taacataaa 
      tattttaaa taattgaca ttaattagt ctactaatg 
      tacatgtag gtagggtga attttgtaa ttaaaagtt 
      aattatttt gtaatgtgg ggtgaatga aattgtcat 
      tagtatagt gtgtttgat acagccatt ttggttaga 
      tcgaattat gctaactta tttcgtaac ttaactaca 
      ctatactaa aactgagtc ttccaatta aaacaaata 
      attaattgt aagttatta tgaaaatat agaaaatgt 
      agtactact aatgtattc aattttaag caacatgtg 
      tagaacagt tatcaagca ttgtttatt tgtcaaacg 
      ttgattgtc tgttgtatg tacaattca tactagact 
      tcaccatat cttaaatga attgcatag ttttaatta 
      aaactaata tatttatca aactgattt tgcatccaa 
      acccatctc aacctttcc ttcccagac tgccatgta 
      acggtgaat gtttgaact tgcttttac tatttttat 
      cttttaatt tccttagag ggacttttg aaaacaggc 
      agaaagatt attt
    • >TC001887 RB
      aatgtagtg agggcggcg tcggcgcaa gaatgcaac 
      ccccaaata gattaggcc gactcgggg tgtgtacta 
      cagcctaaa cgccaccgg tacaattca cccttgctc 
      acggttgaa atgaaatta atatgtgaa aactaagcg 
      aaattagtg cgtgttcga gtggaaaag gcgcaggaa 
      ggcgatgaa aaagcccac ccccggcga gacggatca 
      agatgcccc ttgaagacc gcttaaccc tcgcagatt 
      gaccggaag ttgtgtaaa atcgctgtg aacatggtg 
      tgtgcgagt cttgtgcga cgcaggacc ttcaaaaaa 
      ctattctac gttgtggtg gttttcctg gtgcgaata 
      tgccccgct ttcatggat cagggtgaa gacatcccc 
      cataacgaa gtacggaac tgggcgctc aaattcgga 
      gttgattta tgggagtat ggaaaaatg tccacaaga 
      ctgaaggag ctacagagg aaataccac gacgaaaat 
      atcaaagtt gcacgaaaa gacggttta ctcttgata 
      agagacatg gcgaaagaa gtccagaat atgatgagc 
      ttcaaaatt gaagccgtt cggaggata accgaatca 
      gctgaacaa gctgcactg acgccacaa acagataac 
      ggacaaccc tttcgttat tataacgcc aaaagactg 
      aattcgttt ggtcctgat ggacgacca gtcgagggc 
      acgagagaa atgatgcta acgccgaat cctcatttc 
      gaccattta ccagttaat actagtctt agtaccgtt 
      ctaatccca ccaaatgtt gaagaatac gatcccgaa 
      gttataaac gcgatccag tggtccgaa catttagac 
      ccccttttc atacacaac tacgaggac gatccttcc 
      ctctcctgg caattcttc gggagcggc accggattt 
      ctaaggaga tatccaggt attgcgtgg ccccctgtg 
      gacatgtcg acggtctgg cagcgtccc agaagctct 
      cgaaacgtt tacgatttt cgctcctcg gcgtggtac 
      gtctctgca gcaacatcg ccaaaggat atcgtaatc 
      cttattgac aactctggc tcaatgagt ggtcataaa 
      tctaacctc gcccgagca acaaccgaa tctatttta 
      aatacgtta ggagacaac gatttcgta aacgttttc 
      aagttttcg gatataacc gaggaaacc gttccctgt 
      ttcaaagac atgcttgtg caagccaac aacgagaat 
      gttcgctgg ttgaaagag tctctctcg acgtttaaa 
      tcggagaat attgccaat tttacggcg gcacttgtt 
      acaggattc gaaatctta cataaatat aacaggacg 
      ggacagggc tgtcagtgc aaccaagcg atcatgctc 
      atcactgac ggaccaccc tccagttac caggagatt 
      ttcaaaatg tacaacttc ccgcattac ccagtcaga 
      attttcacc tacctcgtg gggaaagac tccagcagc 
      gcgcacgaa atgcgctgg atggcctgc gcaaacaaa 
      ggctactac acgaggata gaaaatttt gacgaaatc 
      aatcaaaaa gtcctccac tatatcgaa gtcttagcc 
      agacccatg gtcatgtac cagacggat caccccatc 
      cagtggacc cctgcatac gtgggtggt cgggccgat 
      agcttccta aatgacaaa gttggccaa ctgataacc 
      acagttacc accccggtc ttcgatcga cgcaaccac 
      acggtccga gtggctaat ttgttaggt gtggttgga 
      acggatgtg tcgatcgac caaatcaaa aaattggtg 
      ccgccgtat aagctcggt gttaatggc tattccttc 
      attatcaat aataacggc cacgtgttg taccatccc 
      gacttgagg cctttgcaa aataacgaa ctgtacgac 
      gaaacactc gaaccgcag tacatttca gtcgatctg 
      actgaagtc gagttggtc gaaaacgaa aacgggcct 
      cgagagaac cattctgtt ctcctcgat ctaaggtac 
      gacatgatc cagcaaaaa gaaggggag acagaatta 
      ggggtcaag atccactac gacaacgtg cgtcgcgtg 
      acaacacga cggcacaaa tatttctat acccccatt 
      gagggcacg cctttctcg ctgggacta gcgatcccg 
      gaacgctac ggcatgtat gagctacta gccgagcaa 
      gaaatcaaa cacagccaa cggaacgtg accgattat 
      ttcaaaggc aacaactgg aaagtccac cctgattgg 
      gtctactgt gagtacaca agtggcacc tccggggag 
      cagtggttc cgaacggcg gaggagcgg gtcttgcat 
      tttttatcc cggagtaga cgtccgggg tggaaatgg 
      atgtctctg cggccgcgg tcgccttcg caaagggag 
      caccaccac caaacgacc aaaaaggac aaagatgcc 
      tacttctgc gacaaaaac ttgctccag tcgctagtt 
      ctggacgcg atggtgact gaatcgtta gaacgacac 
      cacacgcga accgaagac gaccacgag gggcaccaa 
      atctttgga aaaacactg actttcgtt gccacacga 
      agcgggttg cttaggtgg accgaccat gtcacacct 
      ggcgaaaag gcacaacaa ccccatttt agcgagaca 
      aacgtgaaa gccatggac gagacgtgg tacaagcgt 
      gccgtcgac cagcactcc atcgagccc gaaagtttc 
      gttttttcc gtacccttc gacagcaat ttacaggag 
      aatccccta atcacagcg actcatgcc gtttttgtc 
      gaacataat ggccacagg gcaccggct gccgttgtc 
      ggaatacag taccaacac acaactttg gcttctcat 
      ttcctaaac atcacctcc aagtgcacc ggcaccaca 
      acatgccac aaaacgtgc gcaagtgaa aagttggat 
      tgctacgtg cttgacaat aatggtttc gtgataatt 
      tcggaacgg tccgagcac acgggccag ttctttggc 
      cagatcgac ggcactata atggattcg ctggtccag 
      gaccgcata tacaagaaa ataaccgtg tatgactac 
      caaggagct tgctccaat agcaaaagt cactacagt 
      ggcgacgcg tatcaagtc cagcctttt gacccgatc 
      aagtcattt ttcaagtac ttggtcaag ttttcgtgg 
      ttactgctt gccaaaatc gaggcggct tacggaact 
      gcgatcgct tacgcccaa gacgatgaa atctaccct 
      gagtacgac cccaatttt gatcaattc ccgactggc 
      gaagacgtg atcggggag caggacccc atacttcca 
      cccccttat acgaatact ccttccttt atccctcct 
      tatgaatcc gaccccatg gaaggggtc gatatgagc 
      caatttggg gtcaggcct tgcgaccgc aaggtcgac 
      ctctatgtc ctccaacca gacaagttg aatgtgagc 
      ggacaaagc gacccctta aagggcaaa ctcacgaac 
      tgtcacgta acagcttgc gaaaggcca tttagtgtt 
      cagaaaatt ccgcatagt aatttgatt ttgttggtt 
      gtggacacc atgtgtcct tgtgggagt aagcagttt 
      agtattacc ccacatgaa ctgatatac gatacaggg 
      aacggaggc tgtttgcat aaacctaag gatagttta 
      tatagaaga cgtccaccg aagtgtatt aattaccac 
      cctgaggta agtcgtagt ttttgtttg gtgggagta 
      acgattgtt ttgctgcag gagagtgag ataaatatt 
      tgtggtaag gcatcgatt ccagttgca aacgtcgcg 
      actttgctt attatcagc gcaatgcgc tacattttg 
      gccgttttg tcgtgattg taagttata cctaagcta 
      aataccttt aaaacgtaa agaggcaac tattgttgc 
      atttaatag actacaatg aaatttctt atataacac 
      gttcataca tttcattta ctcatatca caaatcgaa 
      ggattgtat tatttggat agaatagag cagtttttt 
      aaaaagtat atatattga caaaagtcg taaaaacta 
      gttgaattt tttatataa tttataaaa tgtgaaagt 
      aattttggg tgtatttgt acatatcaa atgttgtac 
      tattaacct gtgattttc acaaggaaa atcgcgatt 
      ccgtattat ttagattaa tgtatttga ttacgacaa 
      taactttcc gttggttga tttgtttga gggaaatgt 
      actgatcgc gcaatcggt gtggtggtg ggcgaagtt 
      tttgttatt ttggcgcgc accacggga ttgagcgac 
      ctgtaacta tgacaatac ttatagtaa aactgtgaa 
      tattggcat acaggttac gtagagtag tcgacataa 
      tctgctgtt gtaaataat aaaacaaat ctgtgtgtc 
      gtacgatta gttcaagtc taaatttaa taaatacac 
      tatggtagt tatgtttga tcgcgttca tattttcta 
      attacaatt gtaagtgcc agtttttct actgacttc 
      atcctttgt tacttaaca ttaagacga caaatctaa 
      cgagttctg ctttcgttt ggtatgata tgtgtcaaa 
      gtatttgta cattgtaag attagaatt tgtacatta 
      ctagataca attaatgga tgaaattta tttcaggta 
      ctgtaacat aaatatttt aaataattg acattaatt 
      agtctacta atgtacatg taggtaggg tgaattttg 
      taattaaaa gttaattat tttgtaatg tggggtgaa 
      tgaaattgt cattagtat agtgtgttt gatacagcc 
      attttggtt agatcgaat tatgctaac ttatttcgt 
      aacttaact acactatac taaaactga gtcttccaa 
      ttaaaacaa ataattaat tgtaagtta ttatgaaaa 
      tatagaaaa tgtagtact actaatgta ttcaatttt 
      aagcaacat gtgtagaac agttatcaa gcattgttt 
      atttgtcaa acgttgatt gtctgttgt atgtacaat 
      tcatactag acttcacca tatcttaaa tgaattgca 
      tagttttaa ttaaaacta atatattta tcaaactga 
      ttttgcatc caaacccat ctcaacctt tccttccca 
      gactgccat gtaacggtg aatgtttga acttgcttt 
      tactatttt tatctttta atttcctta gagggactt 
      ttgaaaaca ggcagaaag attattt