| General information | |||
| TC000625 | Gene
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
NC_007417.3: 8894527..8931778 | |
| Sequence information | |||
| Transcripts / Proteins (2) | Get mRNA sequence
Get CDS sequence Get protein sequence |
||
| Ortholog information (from OrthoDB)
The information about the homolog genes in Drosophila
is provided by OrthoDB http://www.orthodb.org/.
The homologs are sorted according to their similarity score. For an orthology statement additional
analysis are required. | |||
| Closest fly homologs |
|
TC000625 | |
GO terms for Tribolium
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There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.
GO terms for the homologous Drosophila genes
Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.
| Gene | {{ goGene }} |
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|---|---|---|
| GO ID | * {{ blurIdResult }} |
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| Evidence | {{ blurEvidenceResult }} |
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| Reference | * {{ blurReferenceResult }} |
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| Quotation | ||
| Name | ||
| Publish name | ||
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* : mandatory fields
For help on how to submit larger datasets or non experimental data please contact us.
Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.
| General information | ||||
| iB_03053 | iB fragment
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
Get FastA Get primers |
||
Usually 10 injected animals
Pupal injection procedure
Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.
3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.
9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.
11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.
Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.
13 dpi: Egg productivity and Ovary analysis
The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi).
In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.
14 dpi: Analysis of embryonic musculature and early embryonic development
Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.
15 dpi: Analysis of larval instar 1 cuticle
Offspring of injected females were analysed and cuticle phenotypes were annotated.
22 dpi: Stink gland analysis
Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.
Terms used in the pupal injection procedure
- larval pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- empty eggs
- Just empty shells are visible, no cuticle has been developed.
- strong defects
- L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
- strongly fragmented (cuticle crumbs)
- No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
- cuticle remnants (with unidentifiable segments)
- Segments or parts of appendages are recognizable, but identity is not clear.
- cuticle remnants (with some identifiable segments)
- At least one segment or appendage is clearly regonizable.
- number of eggs on slide
- affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
For the embryonic muscle analysis the hatched as well as the not hatched were analysed. - total number of affected eggs/embryos/larvae
- Summary of all different phenotypes/ phenotypic series which were annotated.
- inside-out
- The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
Metamorphosis and survival
Lethality 11 days after pupal injection: 20.0% (includes death as pupa, adult)
eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 1 (3 dpi)Days post injection
adult lethality - Number of animals showing the phenotype: 1 (9 dpi)
Days post injection
Analysis of embryonic musculature and early development
number of eggs/embryos/larvae on slide: > 50
embryo/egg with embryonic tissue potentially present, no cuticle, no fluorescence -
Penetrance (percentage of animals/eggs on slide): 30% - 50%
embryo/egg with embryonic tissue, no cuticle, but muscle fluorescence - Penetrance (percentage of animals/eggs on slide): less than 30%
larval musculature irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): 50% - 80%
remarks: muscle pattern potentially obscured by segmentation defect,
embryo/egg with embryonic tissue, no cuticle, but muscle fluorescence - Penetrance (percentage of animals/eggs on slide): less than 30%
larval musculature irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): 50% - 80%
remarks: muscle pattern potentially obscured by segmentation defect,
Analysis of larval stage 1 cuticle
number of eggs/embryos/larvae on slide: > 50
embryo/egg without visible larval cuticle in cuticle preparation - Penetrance (percentage of animals/eggs on slide): 30% - 50%
larva everted (inside-out) - Penetrance (percentage of animals/eggs on slide): 30% - 50%
larva partially dorsalnot closed - Penetrance (percentage of animals/eggs on slide): 30% - 50%
larva appendages partially shape irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
head capsule decreased - Penetrance (percentage of animals/eggs on slide): 30% - 50%
head appendages orientation irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
head not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
thorax not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): 50% - 80%
embryo/egg without visible larval cuticle in cuticle preparation - Penetrance (percentage of animals/eggs on slide): 30% - 50%
larva everted (inside-out) - Penetrance (percentage of animals/eggs on slide): 30% - 50%
larva partially dorsalnot closed - Penetrance (percentage of animals/eggs on slide): 30% - 50%
larva appendages partially shape irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
head capsule decreased - Penetrance (percentage of animals/eggs on slide): 30% - 50%
head appendages orientation irregular - Penetrance (percentage of animals/eggs on slide): less than 30%
head not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
thorax not present - Penetrance (percentage of animals/eggs on slide): 30% - 50%
affected eggs/embryos/larvae - Penetrance (percentage of animals/eggs on slide): 50% - 80%
Usually 10 injected animals
Larval injection procedure
Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.
11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.
16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.
19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.
22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.
41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).
Terms used in the larval injection procedure
- pupal/ adult pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- pupal molt not fulfilled
- The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
Metamorphosis and survival
Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)
- >TC000625 RA
MMARNGALL ILALGLALA QDNKCPSLA LNPSCPCFN FEDGIFLEC PAATANSLR AVLQIVSGP IQSLSIYDL DRTVTKLSS DFFPEGSII KHLQISQSH LEEIQDDCL TTIKPELES LSLVSGKLG EIPQKAFGG LVKLIALDL ESNEISDLP SYSFYGLRL VKLNLKGNQ IGKVSEYGF AGLEDTLSE LDLAENKLV SFPMTAFRR LERLKLLRL SWNEISFIP DDGYSRLES LQFLDLSSN NFEKLGEDC FRPCPSVQT LSLYYNVIE SVHPDTFVS LTKLESLDL SHNKIVFLD ASTFQTNKK LRSIDLSHN HVHYISGVF AFLPDLKEL FLSENNILE IPSDAFSDS SNLSVIYLQ QNAIRRIDP DSLATLHNL AQLHLSSNF VPHIPRDLF HQNHNLTSL SLDSNWISD LEPGTFDKT ISLREIRLH NNRLQSVHR GVFDPLPAL LELHLQNNE IATIDSGAF RTLQSLQHV NLQGNVISE LGDVFMHES PSLVSIQLD SNSITRLHN DSLRGQSSV QIMWLGHNR LRRLDSALF RDLLLIQRV YLTNNSIAF IEDHAFEPM QALKFLDLG LNQLKEITT RTFAELHEL EELFLPHNN IASIEPRAL TNLKKLRVL DLSFNHLTR LHDDIFQEG LPIRVLNLM NCSIGEIEQ GAFRGLNNL NELNLNSNQ LTSRDLNHL DIPGLRVLK VSNNNFSDL FAEALNGLP SLQVIQLEG CAVVKLPKE IFLKNKNLL KIDLSHNFV AELPHGIFL NLNVFKELK LSSNAFKEL PYTALLNIS TMEILSLSF NQMTSVDIS RLNGLPNLK ELDLRNNQI SSLSGFASS NLTQVLSVD LSGNSLSAL PANFFHHSP LMRRMDLSN NRFRQIPNS ALSENTLPG LAWLNLTGN PLVRIHDIA SSHRYPSLE EIHISHTNL TIVTSKDFE NFPDLLHVY LGFNRISRI SPGAFGSLP HLLTLDLGV NELELLPQE RLQGLNHLR ILNLTHNRL KDLEEFPTD LRSLQVLDI SFNQIGRIS KVTFQHLEN LAELFLYGN WITSVSNEA FRPLKKLRT LDLSRNYLE NIPLNAFRP LETQIRSLR TEENPLSCS CDSQELWEW LRDHQKLVE RTNTLELRC EHPPELRGR VFLELDPEQ FCDQPLVVK LGIQDIQPF SVLVSWQSR NHSGLHGYQ VVYYSIDMV DEIRGRLLD RSSRSMKLS KLYPGTRYL ICVLALGNW AHRRETAES RLARRPDNT SQQLEVFSD SMLPLLVDS PTSKCAEVS TLLAPDSVH VGLGGGEHS VQSILTRRL GLIIGCCMG FVVFIVLVS VLGYLKVKK QRQAIKRDQ PIPPEYISY RHFSIQSGE AGHGGHPHF ITNMNTTQI N
- >TC000625 RB
MMNSVCGHE SPLHRQHGS QEGHMMARN GALLILALG LALAQDNKC PSLALNPSC PCFNFEDGI FLECPAATA NSLRAVLQI VSGPIQSLS IYDLDRTVT KLSSDFFPE GSIIKHLQI SQSHLEEIQ DDCLTTIKP ELESLSLVS GKLGEIPQK AFGGLVKLI ALDLESNEI SDLPSYSFY GLRLVKLNL KGNQIGKVS EYGFAGLED TLSELDLAE NKLVSFPMT AFRRLERLK LLRLSWNEI SFIPDDGYS RLESLQFLD LSSNNFEKL GEDCFRPCP SVQTLSLYY NVIESVHPD TFVSLTKLE SLDLSHNKI VFLDASTFQ TNKKLRSID LSHNHVHYI SGVFAFLPD LKELFLSEN NILEIPSDA FSDSSNLSV IYLQQNAIR RIDPDSLAT LHNLAQLHL SSNFVPHIP RDLFHQNHN LTSLSLDSN WISDLEPGT FDKTISLRE IRLHNNRLQ SVHRGVFDP LPALLELHL QNNEIATID SGAFRTLQS LQHVNLQGN VISELGDVF MHESPSLVS IQLDSNSIT RLHNDSLRG QSSVQIMWL GHNRLRRLD SALFRDLLL IQRVYLTNN SIAFIEDHA FEPMQALKF LDLGLNQLK EITTRTFAE LHELEELFL PHNNIASIE PRALTNLKK LRVLDLSFN HLTRLHDDI FQEGLPIRV LNLMNCSIG EIEQGAFRG LNNLNELNL NSNQLTSRD LNHLDIPGL RVLKVSNNN FSDLFAEAL NGLPSLQVI QLEGCAVVK LPKEIFLKN KNLLKIDLS HNFVAELPH GIFLNLNVF KELKLSSNA FKELPYTAL LNISTMEIL SLSFNQMTS VDISRLNGL PNLKELDLR NNQISSLSG FASSNLTQV LSVDLSGNS LSALPANFF HHSPLMRRM DLSNNRFRQ IPNSALSEN TLPGLAWLN LTGNPLVRI HDIASSHRY PSLEEIHIS HTNLTIVTS KDFENFPDL LHVYLGFNR ISRISPGAF GSLPHLLTL DLGVNELEL LPQERLQGL NHLRILNLT HNRLKDLEE FPTDLRSLQ VLDISFNQI GRISKVTFQ HLENLAELF LYGNWITSV SNEAFRPLK KLRTLDLSR NYLENIPLN AFRPLETQI RSLRTEENP LSCSCDSQE LWEWLRDHQ KLVERTNTL ELRCEHPPE LRGRVFLEL DPEQFCDQP LVVKLGIQD IQPFSVLVS WQSRNHSGL HGYQVVYYS IDMVDEIRG RLLDRSSRS MKLSKLYPG TRYLICVLA LGNWAHRRE TAESRLARR PDNTSQQLE VFSDSMLPL LVDSPTSKC AEVSTLLAP DSVHVGLGG GEHSVQSIL TRRLGLIIG CCMGFVVFI VLVSVLGYL KVKKQRQAI KRDQPIPPE YISYRHFSI QSGEAGHGG HPHFITNMN TTQIN
- >TC000625 RA
atgatggcg cgcaatggc gcccttctg atcctggcc ctgggcctc gcccttgcc caagacaac aaatgccca agtctcgcc cttaaccct tcatgccct tgcttcaat ttcgaagat gggattttc ctggaatgt cccgctgcc actgccaat tcactccga gcggttctc cagatcgtc tccggaccc atccaatca ctcagcatc tacgacctg gaccgcacc gtcaccaaa ctctcctcc gattttttc ccagaaggt tcaatcatc aagcatttg caaatctcg cagagccac ctggaggaa atccaggac gactgtctg accactatc aagcccgag ctggagagt ttgagtctg gtctcgggc aagctgggg gaaatcccc cagaaggcg ttcgggggg ctggtgaag ctgatcgcg cttgatttg gagtcgaac gagattagt gatttaccg agctatagt ttctacggg ttgaggttg gtcaagttg aacttgaag gggaatcag atcgggaaa gtgtcagag tatggcttt gccgggctt gaggacacg ttaagtgag ctggacttg gcggaaaat aagttggtc agtttcccg atgacggcg tttcggcga ctggaacgg ttgaaactg ttgcggttg tcttggaat gagatcagt tttatccca gacgatggg tattcgaga ctcgagtcg ttgcaattt ttggacttg agttctaat aatttcgaa aagttgggc gaggattgc ttccgaccg tgtccgtcc gtccagact ttatccctt tattacaat gtgatagaa tcggtacat cccgacact ttcgtgtct ttaaccaag ttggaatca ctggatttg agtcacaac aagatcgtt ttcctggac gcttcgact ttccaaacc aataaaaag ctgcgttcg attgacttg agccacaac cacgtccat tacataagc ggcgtgttc gcgttcctg cccgacttg aaggaactc ttcctgtcc gagaacaac atcctggag atcccttcg gacgccttc agcgactcg tccaactta tcggtgatt tacttacaa cagaacgca attcgtcgc atcgatccc gactccctc gccaccctc cacaacctc gcccagctg cacttgagt tcgaacttc gtgccacac attcctcgc gatttgttc caccaaaac cacaatctc acatctttg agtctcgac tcgaactgg atatcggac ttagaaccg ggaactttc gacaaaaca atcagcttg agggaaatt cgcttgcac aacaaccgc ctccagagt gtacaccgc ggcgtgttt gatccactc cccgctttg ttggagttg catttgcaa aacaacgag atcgcgacg atcgactcg ggggccttc cgcacgctc cagagtctc caacatgtt aatttgcaa gggaatgtt atttcggaa ctcggggac gtgttcatg cacgagtcg ccctcgctc gtctccatc cagctggac tcgaacagc atcaccagg ctgcacaac gactctctg cggggccag tccagcgtc cagatcatg tggctgggg cacaacagg ctcaggaga ctggacagt gcgctgttt cgggacctc ctcctgata caaagggtg tatctgacc aacaacagc atcgctttt attgaagac cacgcgttc gaaccgatg caagcgctg aagttcctc gacctgggg ctgaaccag ctcaaggag atcacgacg cgcacgttt gcggagttg cacgaactc gaggagttg tttctaccg cacaacaac atcgcaagc atcgagccg cgggcgctc accaacttg aagaagttg cgagtgctg gacctgtcc ttcaaccac ttgacgcga ctccacgat gatattttc caagagggg ttgccgatc cgggttttg aacttgatg aactgctcg atcggggaa atagaacag ggggctttc cgcggtctg aataatttg aacgagttg aatttgaat tcgaatcag ttgacttcg cgcgattta aaccatttg gacattccc ggcttgagg gttttgaaa gtgtcgaac aataatttc agtgatttg ttcgcggag gcgctcaac ggtttgccc tcgctgcag gtgatacag ctggagggt tgcgcggtg gtgaagctc cccaaagaa atttttctg aagaacaaa aacctgctt aaaatcgat ttgagtcac aacttcgtc gccgaactc ccgcatggc atttttctc aatctgaat gtcttcaag gaattgaaa ttgagctcg aatgcgttt aaggagctc ccatatacg gcgctgctg aatatatca acaatggaa atcctctct ctatctttt aaccaaatg acctcggtg gatatctcg cgactgaac ggtttgcca aacttgaaa gagctagat ttgaggaac aaccagatc tcctcattg tcgggcttt gcgtcgtcg aatctgacc caagtcctg agtgtggac ttgagtggc aactcttta tcggccttg ccggccaac ttcttccac cattcgccg ctaatgcgt cggatggac ttatcaaac aaccggttt cgccaaatc cccaactcg gcgctctcc gagaacacg ctcccgggc ctggcttgg ttgaaccta accgggaac cccctggtc cgcatccac gacatcgca tcctcccac cggtacccc tcgctggag gaaatccac atcagccac accaacctg accatcgta acgagcaaa gacttcgag aatttcccc gatttgttg cacgtttac ttgggtttt aaccggatt tcgcgcata tctccgggc gcgttcggc agtttgccc cacttgttg accctcgac ctgggggtc aacgagttg gagctgctg ccccaggag cggctgcaa ggtctcaac catctgcgg atcctcaat ctgacgcac aaccgcctc aaggacctt gaggagttt ccgaccgat ttgaggtcg ttgcaagtg ctggatatc tcgttcaat cagatcgga cggataagc aaagtgacg ttccagcat ctggagaac ttggccgag ttgtttctg tacgggaat tggatcacg tcggtgtct aatgaggct ttcaggccg ttgaaaaaa ttgcgaact ttggatttg agtcggaac tatctcgaa aatatccct ttgaatgct ttcagaccg cttgaaaca caaataaga agtttacgg acggaagag aacccgctg tcgtgtagc tgcgactcg caggagctg tgggagtgg ctcagggat caccagaag cttgtcgag aggacgaat acgctggaa ttacgctgt gaacatccg cctgaactg agaggaaga gttttcctg gagctggac ccggagcaa ttttgcgat cagccgcta gttgtcaaa ctggggata caagacata cagccgttt tcggtgctg gtgtcgtgg cagagccgg aatcactcc ggtttacac ggatatcaa gtcgtttac tactccatc gacatggtg gatgagatc cgcgggcgc ctcctggac cgctcctcc cgctcgatg aagctgtcc aagctgtac cccggcacc cgttacctc atctgcgtc ctagccctg ggcaactgg gcccaccgt cgcgagacg gcggaatcc cggctcgcc cgccgtccc gacaacacc tcccagcag ctggaggtc ttcagcgac tccatgctg ccgctgctc gtcgactcg cccaccagc aagtgcgcc gaggtgagc acgctgctg gcccccgac agcgtgcac gtggggctg gggggcggc gagcacagc gtccagtcc atcctcacg cggcggctg gggctcatc atcggctgc tgcatgggg ttcgtggtg ttcatcgtc ctcgtgtcg gtgctgggg tacctcaag gtgaagaag cagcgccag gcgatcaag agggaccag cccattccg ccggagtat atctcctac agacacttc tcgatccag agcggcgaa gcggggcat ggggggcac ccgcacttt attaccaac atgaacacg acgcagatt aactaa
- >TC000625 RB
atgatgaat agtgtatgc ggacacgag agcccgttg catcggcag catggctcg caagaaggg cacatgatg gcgcgcaat ggcgccctt ctgatcctg gccctgggc ctcgccctt gcccaagac aacaaatgc ccaagtctc gcccttaac ccttcatgc ccttgcttc aatttcgaa gatgggatt ttcctggaa tgtcccgct gccactgcc aattcactc cgagcggtt ctccagatc gtctccgga cccatccaa tcactcagc atctacgac ctggaccgc accgtcacc aaactctcc tccgatttt ttcccagaa ggttcaatc atcaagcat ttgcaaatc tcgcagagc cacctggag gaaatccag gacgactgt ctgaccact atcaagccc gagctggag agtttgagt ctggtctcg ggcaagctg ggggaaatc ccccagaag gcgttcggg gggctggtg aagctgatc gcgcttgat ttggagtcg aacgagatt agtgattta ccgagctat agtttctac gggttgagg ttggtcaag ttgaacttg aaggggaat cagatcggg aaagtgtca gagtatggc tttgccggg cttgaggac acgttaagt gagctggac ttggcggaa aataagttg gtcagtttc ccgatgacg gcgtttcgg cgactggaa cggttgaaa ctgttgcgg ttgtcttgg aatgagatc agttttatc ccagacgat gggtattcg agactcgag tcgttgcaa tttttggac ttgagttct aataatttc gaaaagttg ggcgaggat tgcttccga ccgtgtccg tccgtccag actttatcc ctttattac aatgtgata gaatcggta catcccgac actttcgtg tctttaacc aagttggaa tcactggat ttgagtcac aacaagatc gttttcctg gacgcttcg actttccaa accaataaa aagctgcgt tcgattgac ttgagccac aaccacgtc cattacata agcggcgtg ttcgcgttc ctgcccgac ttgaaggaa ctcttcctg tccgagaac aacatcctg gagatccct tcggacgcc ttcagcgac tcgtccaac ttatcggtg atttactta caacagaac gcaattcgt cgcatcgat cccgactcc ctcgccacc ctccacaac ctcgcccag ctgcacttg agttcgaac ttcgtgcca cacattcct cgcgatttg ttccaccaa aaccacaat ctcacatct ttgagtctc gactcgaac tggatatcg gacttagaa ccgggaact ttcgacaaa acaatcagc ttgagggaa attcgcttg cacaacaac cgcctccag agtgtacac cgcggcgtg tttgatcca ctccccgct ttgttggag ttgcatttg caaaacaac gagatcgcg acgatcgac tcgggggcc ttccgcacg ctccagagt ctccaacat gttaatttg caagggaat gttatttcg gaactcggg gacgtgttc atgcacgag tcgccctcg ctcgtctcc atccagctg gactcgaac agcatcacc aggctgcac aacgactct ctgcggggc cagtccagc gtccagatc atgtggctg gggcacaac aggctcagg agactggac agtgcgctg tttcgggac ctcctcctg atacaaagg gtgtatctg accaacaac agcatcgct tttattgaa gaccacgcg ttcgaaccg atgcaagcg ctgaagttc ctcgacctg gggctgaac cagctcaag gagatcacg acgcgcacg tttgcggag ttgcacgaa ctcgaggag ttgtttcta ccgcacaac aacatcgca agcatcgag ccgcgggcg ctcaccaac ttgaagaag ttgcgagtg ctggacctg tccttcaac cacttgacg cgactccac gatgatatt ttccaagag gggttgccg atccgggtt ttgaacttg atgaactgc tcgatcggg gaaatagaa cagggggct ttccgcggt ctgaataat ttgaacgag ttgaatttg aattcgaat cagttgact tcgcgcgat ttaaaccat ttggacatt cccggcttg agggttttg aaagtgtcg aacaataat ttcagtgat ttgttcgcg gaggcgctc aacggtttg ccctcgctg caggtgata cagctggag ggttgcgcg gtggtgaag ctccccaaa gaaattttt ctgaagaac aaaaacctg cttaaaatc gatttgagt cacaacttc gtcgccgaa ctcccgcat ggcattttt ctcaatctg aatgtcttc aaggaattg aaattgagc tcgaatgcg tttaaggag ctcccatat acggcgctg ctgaatata tcaacaatg gaaatcctc tctctatct tttaaccaa atgacctcg gtggatatc tcgcgactg aacggtttg ccaaacttg aaagagcta gatttgagg aacaaccag atctcctca ttgtcgggc tttgcgtcg tcgaatctg acccaagtc ctgagtgtg gacttgagt ggcaactct ttatcggcc ttgccggcc aacttcttc caccattcg ccgctaatg cgtcggatg gacttatca aacaaccgg tttcgccaa atccccaac tcggcgctc tccgagaac acgctcccg ggcctggct tggttgaac ctaaccggg aaccccctg gtccgcatc cacgacatc gcatcctcc caccggtac ccctcgctg gaggaaatc cacatcagc cacaccaac ctgaccatc gtaacgagc aaagacttc gagaatttc cccgatttg ttgcacgtt tacttgggt tttaaccgg atttcgcgc atatctccg ggcgcgttc ggcagtttg ccccacttg ttgaccctc gacctgggg gtcaacgag ttggagctg ctgccccag gagcggctg caaggtctc aaccatctg cggatcctc aatctgacg cacaaccgc ctcaaggac cttgaggag tttccgacc gatttgagg tcgttgcaa gtgctggat atctcgttc aatcagatc ggacggata agcaaagtg acgttccag catctggag aacttggcc gagttgttt ctgtacggg aattggatc acgtcggtg tctaatgag gctttcagg ccgttgaaa aaattgcga actttggat ttgagtcgg aactatctc gaaaatatc cctttgaat gctttcaga ccgcttgaa acacaaata agaagttta cggacggaa gagaacccg ctgtcgtgt agctgcgac tcgcaggag ctgtgggag tggctcagg gatcaccag aagcttgtc gagaggacg aatacgctg gaattacgc tgtgaacat ccgcctgaa ctgagagga agagttttc ctggagctg gacccggag caattttgc gatcagccg ctagttgtc aaactgggg atacaagac atacagccg ttttcggtg ctggtgtcg tggcagagc cggaatcac tccggttta cacggatat caagtcgtt tactactcc atcgacatg gtggatgag atccgcggg cgcctcctg gaccgctcc tcccgctcg atgaagctg tccaagctg taccccggc acccgttac ctcatctgc gtcctagcc ctgggcaac tgggcccac cgtcgcgag acggcggaa tcccggctc gcccgccgt cccgacaac acctcccag cagctggag gtcttcagc gactccatg ctgccgctg ctcgtcgac tcgcccacc agcaagtgc gccgaggtg agcacgctg ctggccccc gacagcgtg cacgtgggg ctggggggc ggcgagcac agcgtccag tccatcctc acgcggcgg ctggggctc atcatcggc tgctgcatg gggttcgtg gtgttcatc gtcctcgtg tcggtgctg gggtacctc aaggtgaag aagcagcgc caggcgatc aagagggac cagcccatt ccgccggag tatatctcc tacagacac ttctcgatc cagagcggc gaagcgggg catgggggg cacccgcac tttattacc aacatgaac acgacgcag attaactaa
- >TC000625 RA
cctgcagaa agcgcgcga atatgtttt ctgaaaccg gaaacttga gctttgggt ttttctggc gaattttaa agtgttgtg ctttgtgaa tcagggatg gactgaggg gagttcgag gcccgttgc atcggcagc atggctcgc aagaagggc acatgatgg cgcgcaatg gcgcccttc tgatcctgg ccctgggcc tcgcccttg cccaagaca acaaatgcc caagtctcg cccttaacc cttcatgcc cttgcttca atttcgaag atgggattt tcctggaat gtcccgctg ccactgcca attcactcc gagcggttc tccagatcg tctccggac ccatccaat cactcagca tctacgacc tggaccgca ccgtcacca aactctcct ccgattttt tcccagaag gttcaatca tcaagcatt tgcaaatct cgcagagcc acctggagg aaatccagg acgactgtc tgaccacta tcaagcccg agctggaga gtttgagtc tggtctcgg gcaagctgg gggaaatcc cccagaagg cgttcgggg ggctggtga agctgatcg cgcttgatt tggagtcga acgagatta gtgatttac cgagctata gtttctacg ggttgaggt tggtcaagt tgaacttga aggggaatc agatcggga aagtgtcag agtatggct ttgccgggc ttgaggaca cgttaagtg agctggact tggcggaaa ataagttgg tcagtttcc cgatgacgg cgtttcggc gactggaac ggttgaaac tgttgcggt tgtcttgga atgagatca gttttatcc cagacgatg ggtattcga gactcgagt cgttgcaat ttttggact tgagttcta ataatttcg aaaagttgg gcgaggatt gcttccgac cgtgtccgt ccgtccaga ctttatccc tttattaca atgtgatag aatcggtac atcccgaca ctttcgtgt ctttaacca agttggaat cactggatt tgagtcaca acaagatcg ttttcctgg acgcttcga ctttccaaa ccaataaaa agctgcgtt cgattgact tgagccaca accacgtcc attacataa gcggcgtgt tcgcgttcc tgcccgact tgaaggaac tcttcctgt ccgagaaca acatcctgg agatccctt cggacgcct tcagcgact cgtccaact tatcggtga tttacttac aacagaacg caattcgtc gcatcgatc ccgactccc tcgccaccc tccacaacc tcgcccagc tgcacttga gttcgaact tcgtgccac acattcctc gcgatttgt tccaccaaa accacaatc tcacatctt tgagtctcg actcgaact ggatatcgg acttagaac cgggaactt tcgacaaaa caatcagct tgagggaaa ttcgcttgc acaacaacc gcctccaga gtgtacacc gcggcgtgt ttgatccac tccccgctt tgttggagt tgcatttgc aaaacaacg agatcgcga cgatcgact cgggggcct tccgcacgc tccagagtc tccaacatg ttaatttgc aagggaatg ttatttcgg aactcgggg acgtgttca tgcacgagt cgccctcgc tcgtctcca tccagctgg actcgaaca gcatcacca ggctgcaca acgactctc tgcggggcc agtccagcg tccagatca tgtggctgg ggcacaaca ggctcagga gactggaca gtgcgctgt ttcgggacc tcctcctga tacaaaggg tgtatctga ccaacaaca gcatcgctt ttattgaag accacgcgt tcgaaccga tgcaagcgc tgaagttcc tcgacctgg ggctgaacc agctcaagg agatcacga cgcgcacgt ttgcggagt tgcacgaac tcgaggagt tgtttctac cgcacaaca acatcgcaa gcatcgagc cgcgggcgc tcaccaact tgaagaagt tgcgagtgc tggacctgt ccttcaacc acttgacgc gactccacg atgatattt tccaagagg ggttgccga tccgggttt tgaacttga tgaactgct cgatcgggg aaatagaac agggggctt tccgcggtc tgaataatt tgaacgagt tgaatttga attcgaatc agttgactt cgcgcgatt taaaccatt tggacattc ccggcttga gggttttga aagtgtcga acaataatt tcagtgatt tgttcgcgg aggcgctca acggtttgc cctcgctgc aggtgatac agctggagg gttgcgcgg tggtgaagc tccccaaag aaatttttc tgaagaaca aaaacctgc ttaaaatcg atttgagtc acaacttcg tcgccgaac tcccgcatg gcatttttc tcaatctga atgtcttca aggaattga aattgagct cgaatgcgt ttaaggagc tcccatata cggcgctgc tgaatatat caacaatgg aaatcctct ctctatctt ttaaccaaa tgacctcgg tggatatct cgcgactga acggtttgc caaacttga aagagctag atttgagga acaaccaga tctcctcat tgtcgggct ttgcgtcgt cgaatctga cccaagtcc tgagtgtgg acttgagtg gcaactctt tatcggcct tgccggcca acttcttcc accattcgc cgctaatgc gtcggatgg acttatcaa acaaccggt ttcgccaaa tccccaact cggcgctct ccgagaaca cgctcccgg gcctggctt ggttgaacc taaccggga accccctgg tccgcatcc acgacatcg catcctccc accggtacc cctcgctgg aggaaatcc acatcagcc acaccaacc tgaccatcg taacgagca aagacttcg agaatttcc ccgatttgt tgcacgttt acttgggtt ttaaccgga tttcgcgca tatctccgg gcgcgttcg gcagtttgc cccacttgt tgaccctcg acctggggg tcaacgagt tggagctgc tgccccagg agcggctgc aaggtctca accatctgc ggatcctca atctgacgc acaaccgcc tcaaggacc ttgaggagt ttccgaccg atttgaggt cgttgcaag tgctggata tctcgttca atcagatcg gacggataa gcaaagtga cgttccagc atctggaga acttggccg agttgtttc tgtacggga attggatca cgtcggtgt ctaatgagg ctttcaggc cgttgaaaa aattgcgaa ctttggatt tgagtcgga actatctcg aaaatatcc ctttgaatg ctttcagac cgcttgaaa cacaaataa gaagtttac ggacggaag agaacccgc tgtcgtgta gctgcgact cgcaggagc tgtgggagt ggctcaggg atcaccaga agcttgtcg agaggacga atacgctgg aattacgct gtgaacatc cgcctgaac tgagaggaa gagttttcc tggagctgg acccggagc aattttgcg atcagccgc tagttgtca aactgggga tacaagaca tacagccgt tttcggtgc tggtgtcgt ggcagagcc ggaatcact ccggtttac acggatatc aagtcgttt actactcca tcgacatgg tggatgaga tccgcgggc gcctcctgg accgctcct cccgctcga tgaagctgt ccaagctgt accccggca cccgttacc tcatctgcg tcctagccc tgggcaact gggcccacc gtcgcgaga cggcggaat cccggctcg cccgccgtc ccgacaaca cctcccagc agctggagg tcttcagcg actccatgc tgccgctgc tcgtcgact cgcccacca gcaagtgcg ccgaggtga gcacgctgc tggcccccg acagcgtgc acgtggggc tggggggcg gcgagcaca gcgtccagt ccatcctca cgcggcggc tggggctca tcatcggct gctgcatgg ggttcgtgg tgttcatcg tcctcgtgt cggtgctgg ggtacctca aggtgaaga agcagcgcc aggcgatca agagggacc agcccattc cgccggagt atatctcct acagacact tctcgatcc agagcggcg aagcggggc atggggggc acccgcact ttattacca acatgaaca cgacgcaga ttaactaat catatcagt ggttcggac gctcggaga gtggtagtg ataatcagg ataatgggg aggttcttc cggggtttt agagtggac tggggtgag agaatcgac agttcttgc agtttttaa gacaaggat ttttgtaaa ataaacgtg gatggaaat gttgaattg ttgaattgg gcggttttt tgcctcaaa tacattttc cctcgagca tcatcccgg cgataacta accagaaac acagcccaa ataaatttt ttagtaaca aatcatctt ttttattat ctgtgaaag ccctcattt cccgtaaca gaaaggctt tatttaccg taaaaacgt tattacttc cctaatttt tatttaaat gacttgtga gattagcgc cggtgtttg agcacaaaa tgtcgcaat tgttactgt tattgcaat tttttattg ttaatttct ctggcgggt gtgggcaat gaagcggcg aaaattgca aggactggc gcccgattt cctagtgac aaagttgca tgaacttta acaatgttc tagtcaaaa atcacataa acattttta tagtacgtt aaaattgtg ttaattttt gtaaatatt tagactaaa ataaattgt atttaaaat c
- >TC000625 RB
cctgcagaa agcgcgcga atatgtttt ctgaaaccg gaaacttga gctttgggt ttttctggc gaattttaa agtgttgtg ctttgtgaa tcagggatg gactgaggg gagttcgag ttgcaggca ctgaactgg agcactata agtaggtaa gttggcgga aacgaagtc ccctaggcc ggccaatag cgatttttt gttcagctt agcaaaact caaacaata aggcaaatt atcgcagct tgctaattc aatttcggt agtaacgtt tgccggaga gatcaagcc aactgggcc aacccggcc cacttgatt ataatgcac aatgatgaa tagtgtatg cggacacga gagcccgtt gcatcggca gcatggctc gcaagaagg gcacatgat ggcgcgcaa tggcgccct tctgatcct ggccctggg cctcgccct tgcccaaga caacaaatg cccaagtct cgcccttaa cccttcatg cccttgctt caatttcga agatgggat tttcctgga atgtcccgc tgccactgc caattcact ccgagcggt tctccagat cgtctccgg acccatcca atcactcag catctacga cctggaccg caccgtcac caaactctc ctccgattt tttcccaga aggttcaat catcaagca tttgcaaat ctcgcagag ccacctgga ggaaatcca ggacgactg tctgaccac tatcaagcc cgagctgga gagtttgag tctggtctc gggcaagct gggggaaat cccccagaa ggcgttcgg ggggctggt gaagctgat cgcgcttga tttggagtc gaacgagat tagtgattt accgagcta tagtttcta cgggttgag gttggtcaa gttgaactt gaaggggaa tcagatcgg gaaagtgtc agagtatgg ctttgccgg gcttgagga cacgttaag tgagctgga cttggcgga aaataagtt ggtcagttt cccgatgac ggcgtttcg gcgactgga acggttgaa actgttgcg gttgtcttg gaatgagat cagttttat cccagacga tgggtattc gagactcga gtcgttgca atttttgga cttgagttc taataattt cgaaaagtt gggcgagga ttgcttccg accgtgtcc gtccgtcca gactttatc cctttatta caatgtgat agaatcggt acatcccga cactttcgt gtctttaac caagttgga atcactgga tttgagtca caacaagat cgttttcct ggacgcttc gactttcca aaccaataa aaagctgcg ttcgattga cttgagcca caaccacgt ccattacat aagcggcgt gttcgcgtt cctgcccga cttgaagga actcttcct gtccgagaa caacatcct ggagatccc ttcggacgc cttcagcga ctcgtccaa cttatcggt gatttactt acaacagaa cgcaattcg tcgcatcga tcccgactc cctcgccac cctccacaa cctcgccca gctgcactt gagttcgaa cttcgtgcc acacattcc tcgcgattt gttccacca aaaccacaa tctcacatc tttgagtct cgactcgaa ctggatatc ggacttaga accgggaac tttcgacaa aacaatcag cttgaggga aattcgctt gcacaacaa ccgcctcca gagtgtaca ccgcggcgt gtttgatcc actccccgc tttgttgga gttgcattt gcaaaacaa cgagatcgc gacgatcga ctcgggggc cttccgcac gctccagag tctccaaca tgttaattt gcaagggaa tgttatttc ggaactcgg ggacgtgtt catgcacga gtcgccctc gctcgtctc catccagct ggactcgaa cagcatcac caggctgca caacgactc tctgcgggg ccagtccag cgtccagat catgtggct ggggcacaa caggctcag gagactgga cagtgcgct gtttcggga cctcctcct gatacaaag ggtgtatct gaccaacaa cagcatcgc ttttattga agaccacgc gttcgaacc gatgcaagc gctgaagtt cctcgacct ggggctgaa ccagctcaa ggagatcac gacgcgcac gtttgcgga gttgcacga actcgagga gttgtttct accgcacaa caacatcgc aagcatcga gccgcgggc gctcaccaa cttgaagaa gttgcgagt gctggacct gtccttcaa ccacttgac gcgactcca cgatgatat tttccaaga ggggttgcc gatccgggt tttgaactt gatgaactg ctcgatcgg ggaaataga acagggggc tttccgcgg tctgaataa tttgaacga gttgaattt gaattcgaa tcagttgac ttcgcgcga tttaaacca tttggacat tcccggctt gagggtttt gaaagtgtc gaacaataa tttcagtga tttgttcgc ggaggcgct caacggttt gccctcgct gcaggtgat acagctgga gggttgcgc ggtggtgaa gctccccaa agaaatttt tctgaagaa caaaaacct gcttaaaat cgatttgag tcacaactt cgtcgccga actcccgca tggcatttt tctcaatct gaatgtctt caaggaatt gaaattgag ctcgaatgc gtttaagga gctcccata tacggcgct gctgaatat atcaacaat ggaaatcct ctctctatc ttttaacca aatgacctc ggtggatat ctcgcgact gaacggttt gccaaactt gaaagagct agatttgag gaacaacca gatctcctc attgtcggg ctttgcgtc gtcgaatct gacccaagt cctgagtgt ggacttgag tggcaactc tttatcggc cttgccggc caacttctt ccaccattc gccgctaat gcgtcggat ggacttatc aaacaaccg gtttcgcca aatccccaa ctcggcgct ctccgagaa cacgctccc gggcctggc ttggttgaa cctaaccgg gaaccccct ggtccgcat ccacgacat cgcatcctc ccaccggta cccctcgct ggaggaaat ccacatcag ccacaccaa cctgaccat cgtaacgag caaagactt cgagaattt ccccgattt gttgcacgt ttacttggg ttttaaccg gatttcgcg catatctcc gggcgcgtt cggcagttt gccccactt gttgaccct cgacctggg ggtcaacga gttggagct gctgcccca ggagcggct gcaaggtct caaccatct gcggatcct caatctgac gcacaaccg cctcaagga ccttgagga gtttccgac cgatttgag gtcgttgca agtgctgga tatctcgtt caatcagat cggacggat aagcaaagt gacgttcca gcatctgga gaacttggc cgagttgtt tctgtacgg gaattggat cacgtcggt gtctaatga ggctttcag gccgttgaa aaaattgcg aactttgga tttgagtcg gaactatct cgaaaatat ccctttgaa tgctttcag accgcttga aacacaaat aagaagttt acggacgga agagaaccc gctgtcgtg tagctgcga ctcgcagga gctgtggga gtggctcag ggatcacca gaagcttgt cgagaggac gaatacgct ggaattacg ctgtgaaca tccgcctga actgagagg aagagtttt cctggagct ggacccgga gcaattttg cgatcagcc gctagttgt caaactggg gatacaaga catacagcc gttttcggt gctggtgtc gtggcagag ccggaatca ctccggttt acacggata tcaagtcgt ttactactc catcgacat ggtggatga gatccgcgg gcgcctcct ggaccgctc ctcccgctc gatgaagct gtccaagct gtaccccgg cacccgtta cctcatctg cgtcctagc cctgggcaa ctgggccca ccgtcgcga gacggcgga atcccggct cgcccgccg tcccgacaa cacctccca gcagctgga ggtcttcag cgactccat gctgccgct gctcgtcga ctcgcccac cagcaagtg cgccgaggt gagcacgct gctggcccc cgacagcgt gcacgtggg gctgggggg cggcgagca cagcgtcca gtccatcct cacgcggcg gctggggct catcatcgg ctgctgcat ggggttcgt ggtgttcat cgtcctcgt gtcggtgct ggggtacct caaggtgaa gaagcagcg ccaggcgat caagaggga ccagcccat tccgccgga gtatatctc ctacagaca cttctcgat ccagagcgg cgaagcggg gcatggggg gcacccgca ctttattac caacatgaa cacgacgca gattaacta atcatatca gtggttcgg acgctcgga gagtggtag tgataatca ggataatgg ggaggttct tccggggtt ttagagtgg actggggtg agagaatcg acagttctt gcagttttt aagacaagg atttttgta aaataaacg tggatggaa atgttgaat tgttgaatt gggcggttt tttgcctca aatacattt tccctcgag catcatccc ggcgataac taaccagaa acacagccc aaataaatt ttttagtaa caaatcatc ttttttatt atctgtgaa agccctcat ttcccgtaa cagaaaggc tttatttac cgtaaaaac gttattact tccctaatt tttatttaa atgacttgt gagattagc gccggtgtt tgagcacaa aatgtcgca attgttact gttattgca attttttat tgttaattt ctctggcgg gtgtgggca atgaagcgg cgaaaattg caaggactg gcgcccgat ttcctagtg acaaagttg catgaactt taacaatgt tctagtcaa aaatcacat aaacatttt tatagtacg ttaaaattg tgttaattt ttgtaaata tttagacta aaataaatt gtatttaaa atc
If you use iBeetle-Base, please cite: Dönitz J et al.: Expanded and updated data and a query pipeline for iBeetle-Base,
Nucleic Acids Res. 2018 Jan 4;46(D1):D831-D835. doi: 10.1093/nar/gkx984.
The data is licensed under a
Creative Commons Attribution 3.0 Unported License. (CC-BY)
