Status
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Gene information
General information
TC031001
Former TC numbers

If one gene is splitted or genes are merged, the original TC numbers are listed. One listed former TC number indicates the previous gene has be splitted, serveral former TC number represents a merged gene.

TC000419,TC000422
Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007417.3: 11582535..11701424
Sequence information
Transcripts / Proteins (3) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC031001
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
    {{ blurIdResult }}
    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.

    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_03019

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 20.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 2 (3 dpi)
    Days post injection


    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 50
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC031001 RA
      MAGNIVAEW LRSLHLGQY SESFIDNGY DDLEICKQV 
      GDPDLDAIG VFNPVHRSR LLQSVRTLR EEGAASVYF 
      TLEESAAVH EECLCDNVS ARSSRTSSD KDAAASDSG 
      QEVAKYLDE YEEGKAELV KIPRIQLKK LLREKLAHD 
      GIRLSCQPY STPDGERGY LEGLASRYA DLFSTHYGD 
      VLGHLEDLR RIEWAESSP RERSAITPG TPPANYSPV 
      GGTPVSTGH GLTSSQSQP IYVPGKYSP SSCLSDKEE 
      DEIYGFGYG VFGAQIARQ QQQRLMGPA PTSHQPLLL 
      QHQHNYQTC LSPRSAYFY EFPPSDQNY TNTSKKKTT 
      FSRFLRGLK TSHRKEKHG TSSPRHGRA ATRGVPQRV 
      DTPDSVLQS GLGLTDLGQ HAVLRSMVD PRDYDRLRH 
      LQMNGGAPN TFEETIYKL KLQEALRKR EKFTKEHEE 
      ILRDIKQGL LQLGKEGIR GPLSGDDTY MYDEDARML 
      APGAHGHDR GHWYDEPPY ESDPEDFLM GSSPGPTAT 
      IQNGRVCFT LNLRQESRG EGVISLRSA GDISLPRDT 
      PTATTPRGT PRRGLILPQ AGYPPTIIP LRSSRDRES 
      GDYAGSDVQ SISSRLSTL SVDTSRSEQ QDISQMVSP 
      QYYSHLEGK IRHFRKTNS GYPRSEDGL SPSQSSDYE 
      DTDEFSNCS QQVATVHVS SDGRSAGAS GIVGKVRGL 
      REDVQRKIS RLKGDSNEQ KRADQAFPC SASSVESLP 
      SGSGSSTQA LVRAGSNHS SISTEDADP SPTEQIVGR 
      ARALVDHIP SPYDKEALK YKKGDIIDI ISMNTSGQW 
      RGICHGKKG TFKFINVEL LSERSVKAR REMKWHRNI 
      KGKPISVED LLQKINLQE YISVFVLNG YEDLELFKE 
      IEPSDLDYL GIVNSDHRS KILTAVQLL HDLDSGSEG 
      DIAGSSSEG DDHNRILAL EAGGSCSPF GRRQFPRDS 
      GCYDAALKS SRQTHISPQ GESDASDNA GFCDNTNNL 
      DAVVEQCNN EILARVRQA QKNSMNLKE ELSYQPNIP 
      NSSSSEKLQ KKPKDSYVS VHGQTTLID PCRRNLLNR 
      ASGRKNSED VCEADQKLT SVKYVVGGG SELGLNENS 
      SVLGRSCLS EKSSDSGIS SSSLSSANL KECRQPVLS 
      QNVTENPAH GIFNLSNCA NRTTSTTAN NKEKTFK
    • >TC031001 RB
      MAGNIVAEW LRSLHLGQY SESFIDNGY DDLEICKQV 
      GDPDLDAIG VFNPVHRSR LLQSVRTLR EEGAASVYF 
      TLEESAAVH EECLCDNVS ARSSRTSSD KDAAASDSG 
      QEVAKYLDE YEEGKAELV KIPRIQLKK LLREKLAHD 
      GIRLSCQPY STPIKPI
    • >TC031001 RC
      MLKTQLRML DRRKIEKKI SGDGERGYL EGLASRYAD 
      LFSTHYGDV LGHLEDLRR IEWAESSPR ERSAITPGT 
      PPANYSPVG GTPVSTGHG LTSSQSQPI YVPGKYSPS 
      SCLSDKEED EIYGFGYGV FGAQIARQQ QQRLMGPAP 
      TSHQPLLLQ HQHNYQTCL SPRSAYFYE FPPSDQNYT 
      NTSKKKTTF SRFLRGLKT SHRKEKHGT SSPRHGRAA 
      TRGVPQRVD TPDSVLQSG LGLTDLGQH AVLRSMVDP 
      RDYDRLRHL QMNGGAPNT FEETIYKLK LQEALRKRE 
      KFTKEHEEI LRDIKQGLL QLGKEGIRG PLSGDDTYM 
      YDEDARMLA PGAHGHDRG HWYDEPPYE SDPEDFLMG 
      SSPGPTATI QNGRVCFTL NLRQESRGE GVISLRSAG 
      DISLPRDTP TATTPRGTP RRGLILPQA GYPPTIIPL 
      RSSRDRESG DYAGSDVQS ISSRLSTLS VDTSRSEQQ 
      DISQMVSPQ YYSHLEGKI RHFRKTNSG YPRSEDGLS 
      PSQSSDYED TDEFSNCSQ QVATVHVSS DGRSAGASG 
      IVGKVRGLR EDVQRKISR LKGDSNEQK RADQAFPCS 
      ASSVESLPS GSGSSTQAL VRAGSNHSS ISTEDADPS 
      PTEQIVGRA RALVDHIPS PYDKEALKY KKGDIIDII 
      SMNTSGQWR GICHGKKGT FKFINVELL SERSVKARR 
      EMKWHRNIK GKPISVEDL LQKINLQEY ISVFVLNGY 
      EDLELFKEI EPSDLDYLG IVNSDHRSK ILTAVQLLH 
      DLDSGSEGD IAGSSSEGD DHNRILALE AGGSCSPFG 
      RRQFPRDSG CYDAALKSS RQTHISPQG ESDASDNAG 
      FCDNTNNLD AVVEQCNNE ILARVRQAQ KNSMNLKEE 
      LSYQPNIPN SSSSEKLQK KPKDSYVSV HGQTTLIDP 
      CRRNLLNRA SGRKNSEDV CEADQKLTS VKYVVGGGS 
      ELGLNENSS VLGRSCLSE KSSDSGISS SSLSSANLK 
      ECRQPVLSQ NVTENPAHG IFNLSNCAN RTTSTTANN 
      KEKTFK
    CDS sequence
    • >TC031001 RA
      atggccggc aacatcgtg gccgaatgg ctgcgatcc 
      ctgcacctg gggcagtac tccgagagc ttcatcgac 
      aacggctac gacgacctg gagatctgc aagcaggtg 
      ggcgacccc gacctggac gccatcggc gtcttcaac 
      cccgtgcac cggagccgg ctgctgcag tcggtgcgg 
      acgctgcgc gaggagggc gccgcctcc gtctacttc 
      acgctggag gagagtgcg gccgtgcac gaggagtgt 
      ttgtgtgac aatgtgagt gcgaggtcc tcgcggacg 
      tcctccgac aaggacgcc gccgcctcc gacagcggc 
      caggaggtg gccaagtac ctggacgag tacgaggag 
      ggcaaggcc gagctggtc aagatcccc aggatccag 
      ctgaagaag ctgctgagg gagaagctg gcccacgat 
      ggaatccgg ctcagctgt cagccctat tcgactccg 
      gacggcgag cgcgggtat ctcgagggg ctggcgtcc 
      agatacgcc gacttattt agcacccac tacggggat 
      gttttgggt catctggaa gacttgcgt cgcattgag 
      tgggcagaa tcctcaccc cgggagcgg agtgctatt 
      acgcccggc actccacct gccaactac agccctgta 
      ggtggaaca cccgtttca acaggacat ggtctcacg 
      tcatcacaa tcgcagcct atttacgta cccggaaaa 
      tattcgccg tcgagttgt ttgagtgat aaagaggag 
      gacgaaata tacggcttc ggatatgga gtatttgga 
      gcacaaatc gcaagacag cagcagcaa aggttaatg 
      ggaccagca cccacgagt catcagcca ctattatta 
      caacaccag cacaactat caaacatgt ctaagtcca 
      cggtcggcg tacttttac gaatttcct cccagtgat 
      caaaattac accaacacg agcaaaaag aaaacgact 
      ttttcgagg tttctgcgt ggtcttaag acgtctcat 
      cgcaaagaa aaacacgga acgagttct ccgaggcac 
      ggaagggct gccactcgg ggtgttcct cagagggtc 
      gacacccct gacagcgtc ctccagagc ggtctgggt 
      ctgaccgac ttgggccag cacgcggtg ctgcgctcc 
      atggtggac ccccgcgac tacgaccgc ctccgccac 
      ctgcagatg aacggcggc gcccccaac acattcgaa 
      gagacaatc tacaagttg aaactacaa gaagcttta 
      aggaaacgg gagaaattc acgaaagaa cacgaagag 
      atcctgagg gacatcaag cagggttta ttgcagctg 
      ggcaaggag ggcatccgg gggccgctg tcgggagat 
      gacacttat atgtacgac gaggacgcg cgaatgctg 
      gctccgggc gcccacggc cacgaccgg ggccattgg 
      tatgatgaa ccgccgtac gaaagcgac ccggaggac 
      ttcctaatg ggcagtagt cctggacca acggccacc 
      attcagaac gggcgcgtt tgctttact ctgaacctg 
      aggcaagag tcccgtggg gaaggagta atctcgctg 
      agaagtgcc ggggacatc tcccttcct agggacacc 
      cccaccgcc accactccc aggggaact cctagacgc 
      ggactgatt ctgccacaa gctggctac ccgccgacc 
      atcattccg ctaaggtcg tcccgggac cgagaaagc 
      ggcgactac gccggttcc gacgtccaa agcattagt 
      tcaagactg tcaaccctc tccgtggac acgagtcga 
      tcagagcaa caagacata tcccagatg gtctctccc 
      caatattac agccacctg gagggaaaa atacggcac 
      tttcggaaa acaaacagt ggctacccc cgaagcgaa 
      gacggccta tcgcccagc caaagctca gattacgaa 
      gacacagac gagtttagc aattgtagt caacaagtg 
      gcaacagtt catgtgtcg agtgacggg agatcggcg 
      ggagcgtcc ggaattgtt gggaaagtg cgtggtctg 
      agggaagac gttcagagg aaaatttca agactgaag 
      ggcgattcg aacgagcag aaacgagcg gatcaggcg 
      tttccgtgc tctgcaagt tcggtggaa agtttaccg 
      agtgggtcg ggatctagt acacaggct cttgtcagg 
      gccggaagc aatcatagt tcgatttca acggaggat 
      gccgaccca agtccgacg gagcaaatt gtagggagg 
      gcgagggct ttggttgac cacatacct agtccgtac 
      gataaagaa gctttaaaa tataagaaa ggtgatata 
      atagatata atttcgatg aatacaagt ggccaatgg 
      cgaggcatc tgccatgga aaaaaggga acatttaaa 
      tttattaat gtagagtta ctatcggaa cggtccgtg 
      aaggcgcgg agagagatg aaatggcat cgcaacatt 
      aaaggcaag cccatttcg gtcgaggat ttgttgcag 
      aagatcaat ctacaggag tatatatca gtttttgtg 
      ctgaacggc tacgaagat ctagaactg tttaaagaa 
      attgaaccg tctgacttg gactattta gggatcgtg 
      aattcggac caccgctcg aaaatcctg accgccgtg 
      caacttctt cacgatttg gactcgggg agtgaagga 
      gacatcgcc ggctcgagc agcgaaggc gatgaccat 
      aaccgcatc ctggctctg gaagctgga ggttcgtgt 
      tctccgttt gggcgaaga cagtttccg cgcgactct 
      ggttgttac gacgctgcg ttgaaaagt tcccgccag 
      acccacatt tctccgcaa ggagagtcg gacgcaagt 
      gataatgct ggattttgt gataatacg aataactta 
      gatgctgta gtagaacaa tgcaataac gagatatta 
      gcacgagta cggcaagct caaaagaac tcgatgaat 
      ctgaaagag gagttgtcc tatcagcca aatatcccg 
      aattcatcg agttcggaa aaattgcaa aagaagccg 
      aaagattca tatgtaagt gtgcacgga caaaccacc 
      ctaatagat ccttgtcgt agaaacctc cttaatcgt 
      gctagtgga cggaaaaat agcgaagat gtgtgcgaa 
      gcggatcaa aagttgact tcagtcaaa tatgttgta 
      ggtggaggc tccgaatta ggcctcaat gaaaacagt 
      tcagtgctt gggagaagt tgtctaagt gaaaaatct 
      agtgattcg ggcattagc agtagttca ttgtcttct 
      gcaaatctt aaagaatgt cgccaaccc gtcctttcc 
      caaaacgtt acagaaaac cctgctcac ggcatcttc 
      aatttatct aattgtgcc aatcgtact acgtccaca 
      actgccaat aataaagag aaaactttt aagtaa
    • >TC031001 RB
      atggccggc aacatcgtg gccgaatgg ctgcgatcc 
      ctgcacctg gggcagtac tccgagagc ttcatcgac 
      aacggctac gacgacctg gagatctgc aagcaggtg 
      ggcgacccc gacctggac gccatcggc gtcttcaac 
      cccgtgcac cggagccgg ctgctgcag tcggtgcgg 
      acgctgcgc gaggagggc gccgcctcc gtctacttc 
      acgctggag gagagtgcg gccgtgcac gaggagtgt 
      ttgtgtgac aatgtgagt gcgaggtcc tcgcggacg 
      tcctccgac aaggacgcc gccgcctcc gacagcggc 
      caggaggtg gccaagtac ctggacgag tacgaggag 
      ggcaaggcc gagctggtc aagatcccc aggatccag 
      ctgaagaag ctgctgagg gagaagctg gcccacgat 
      ggaatccgg ctcagctgt cagccctat tcgactccg 
      ataaagcca atttaa
    • >TC031001 RC
      atgctcaaa actcaactt agaatgcta gacagacga 
      aagatcgaa aagaaaatt tctggtgac ggcgagcgc 
      gggtatctc gaggggctg gcgtccaga tacgccgac 
      ttatttagc acccactac ggggatgtt ttgggtcat 
      ctggaagac ttgcgtcgc attgagtgg gcagaatcc 
      tcaccccgg gagcggagt gctattacg cccggcact 
      ccacctgcc aactacagc cctgtaggt ggaacaccc 
      gtttcaaca ggacatggt ctcacgtca tcacaatcg 
      cagcctatt tacgtaccc ggaaaatat tcgccgtcg 
      agttgtttg agtgataaa gaggaggac gaaatatac 
      ggcttcgga tatggagta tttggagca caaatcgca 
      agacagcag cagcaaagg ttaatggga ccagcaccc 
      acgagtcat cagccacta ttattacaa caccagcac 
      aactatcaa acatgtcta agtccacgg tcggcgtac 
      ttttacgaa tttcctccc agtgatcaa aattacacc 
      aacacgagc aaaaagaaa acgactttt tcgaggttt 
      ctgcgtggt cttaagacg tctcatcgc aaagaaaaa 
      cacggaacg agttctccg aggcacgga agggctgcc 
      actcggggt gttcctcag agggtcgac acccctgac 
      agcgtcctc cagagcggt ctgggtctg accgacttg 
      ggccagcac gcggtgctg cgctccatg gtggacccc 
      cgcgactac gaccgcctc cgccacctg cagatgaac 
      ggcggcgcc cccaacaca ttcgaagag acaatctac 
      aagttgaaa ctacaagaa gctttaagg aaacgggag 
      aaattcacg aaagaacac gaagagatc ctgagggac 
      atcaagcag ggtttattg cagctgggc aaggagggc 
      atccggggg ccgctgtcg ggagatgac acttatatg 
      tacgacgag gacgcgcga atgctggct ccgggcgcc 
      cacggccac gaccggggc cattggtat gatgaaccg 
      ccgtacgaa agcgacccg gaggacttc ctaatgggc 
      agtagtcct ggaccaacg gccaccatt cagaacggg 
      cgcgtttgc tttactctg aacctgagg caagagtcc 
      cgtggggaa ggagtaatc tcgctgaga agtgccggg 
      gacatctcc cttcctagg gacaccccc accgccacc 
      actcccagg ggaactcct agacgcgga ctgattctg 
      ccacaagct ggctacccg ccgaccatc attccgcta 
      aggtcgtcc cgggaccga gaaagcggc gactacgcc 
      ggttccgac gtccaaagc attagttca agactgtca 
      accctctcc gtggacacg agtcgatca gagcaacaa 
      gacatatcc cagatggtc tctccccaa tattacagc 
      cacctggag ggaaaaata cggcacttt cggaaaaca 
      aacagtggc tacccccga agcgaagac ggcctatcg 
      cccagccaa agctcagat tacgaagac acagacgag 
      tttagcaat tgtagtcaa caagtggca acagttcat 
      gtgtcgagt gacgggaga tcggcggga gcgtccgga 
      attgttggg aaagtgcgt ggtctgagg gaagacgtt 
      cagaggaaa atttcaaga ctgaagggc gattcgaac 
      gagcagaaa cgagcggat caggcgttt ccgtgctct 
      gcaagttcg gtggaaagt ttaccgagt gggtcggga 
      tctagtaca caggctctt gtcagggcc ggaagcaat 
      catagttcg atttcaacg gaggatgcc gacccaagt 
      ccgacggag caaattgta gggagggcg agggctttg 
      gttgaccac atacctagt ccgtacgat aaagaagct 
      ttaaaatat aagaaaggt gatataata gatataatt 
      tcgatgaat acaagtggc caatggcga ggcatctgc 
      catggaaaa aagggaaca tttaaattt attaatgta 
      gagttacta tcggaacgg tccgtgaag gcgcggaga 
      gagatgaaa tggcatcgc aacattaaa ggcaagccc 
      atttcggtc gaggatttg ttgcagaag atcaatcta 
      caggagtat atatcagtt tttgtgctg aacggctac 
      gaagatcta gaactgttt aaagaaatt gaaccgtct 
      gacttggac tatttaggg atcgtgaat tcggaccac 
      cgctcgaaa atcctgacc gccgtgcaa cttcttcac 
      gatttggac tcggggagt gaaggagac atcgccggc 
      tcgagcagc gaaggcgat gaccataac cgcatcctg 
      gctctggaa gctggaggt tcgtgttct ccgtttggg 
      cgaagacag tttccgcgc gactctggt tgttacgac 
      gctgcgttg aaaagttcc cgccagacc cacatttct 
      ccgcaagga gagtcggac gcaagtgat aatgctgga 
      ttttgtgat aatacgaat aacttagat gctgtagta 
      gaacaatgc aataacgag atattagca cgagtacgg 
      caagctcaa aagaactcg atgaatctg aaagaggag 
      ttgtcctat cagccaaat atcccgaat tcatcgagt 
      tcggaaaaa ttgcaaaag aagccgaaa gattcatat 
      gtaagtgtg cacggacaa accacccta atagatcct 
      tgtcgtaga aacctcctt aatcgtgct agtggacgg 
      aaaaatagc gaagatgtg tgcgaagcg gatcaaaag 
      ttgacttca gtcaaatat gttgtaggt ggaggctcc 
      gaattaggc ctcaatgaa aacagttca gtgcttggg 
      agaagttgt ctaagtgaa aaatctagt gattcgggc 
      attagcagt agttcattg tcttctgca aatcttaaa 
      gaatgtcgc caacccgtc ctttcccaa aacgttaca 
      gaaaaccct gctcacggc atcttcaat ttatctaat 
      tgtgccaat cgtactacg tccacaact gccaataat 
      aaagagaaa acttttaag taa
    mRNA sequence
    • >TC031001 RA
      cgtgaggtg cttgtgtgg cgatggccg gcaacatcg 
      tggccgaat ggctgcgat ccctgcacc tggggcagt 
      actccgaga gcttcatcg acaacggct acgacgacc 
      tggagatct gcaagcagg tgggcgacc ccgacctgg 
      acgccatcg gcgtcttca accccgtgc accggagcc 
      ggctgctgc agtcggtgc ggacgctgc gcgaggagg 
      gcgccgcct ccgtctact tcacgctgg aggagagtg 
      cggccgtgc acgaggagt gtttgtgtg acaatgtga 
      gtgcgaggt cctcgcgga cgtcctccg acaaggacg 
      ccgccgcct ccgacagcg gccaggagg tggccaagt 
      acctggacg agtacgagg agggcaagg ccgagctgg 
      tcaagatcc ccaggatcc agctgaaga agctgctga 
      gggagaagc tggcccacg atggaatcc ggctcagct 
      gtcagccct attcgactc cggacggcg agcgcgggt 
      atctcgagg ggctggcgt ccagatacg ccgacttat 
      ttagcaccc actacgggg atgttttgg gtcatctgg 
      aagacttgc gtcgcattg agtgggcag aatcctcac 
      cccgggagc ggagtgcta ttacgcccg gcactccac 
      ctgccaact acagccctg taggtggaa cacccgttt 
      caacaggac atggtctca cgtcatcac aatcgcagc 
      ctatttacg tacccggaa aatattcgc cgtcgagtt 
      gtttgagtg ataaagagg aggacgaaa tatacggct 
      tcggatatg gagtatttg gagcacaaa tcgcaagac 
      agcagcagc aaaggttaa tgggaccag cacccacga 
      gtcatcagc cactattat tacaacacc agcacaact 
      atcaaacat gtctaagtc cacggtcgg cgtactttt 
      acgaatttc ctcccagtg atcaaaatt acaccaaca 
      cgagcaaaa agaaaacga ctttttcga ggtttctgc 
      gtggtctta agacgtctc atcgcaaag aaaaacacg 
      gaacgagtt ctccgaggc acggaaggg ctgccactc 
      ggggtgttc ctcagaggg tcgacaccc ctgacagcg 
      tcctccaga gcggtctgg gtctgaccg acttgggcc 
      agcacgcgg tgctgcgct ccatggtgg acccccgcg 
      actacgacc gcctccgcc acctgcaga tgaacggcg 
      gcgccccca acacattcg aagagacaa tctacaagt 
      tgaaactac aagaagctt taaggaaac gggagaaat 
      tcacgaaag aacacgaag agatcctga gggacatca 
      agcagggtt tattgcagc tgggcaagg agggcatcc 
      gggggccgc tgtcgggag atgacactt atatgtacg 
      acgaggacg cgcgaatgc tggctccgg gcgcccacg 
      gccacgacc ggggccatt ggtatgatg aaccgccgt 
      acgaaagcg acccggagg acttcctaa tgggcagta 
      gtcctggac caacggcca ccattcaga acgggcgcg 
      tttgcttta ctctgaacc tgaggcaag agtcccgtg 
      gggaaggag taatctcgc tgagaagtg ccggggaca 
      tctcccttc ctagggaca cccccaccg ccaccactc 
      ccaggggaa ctcctagac gcggactga ttctgccac 
      aagctggct acccgccga ccatcattc cgctaaggt 
      cgtcccggg accgagaaa gcggcgact acgccggtt 
      ccgacgtcc aaagcatta gttcaagac tgtcaaccc 
      tctccgtgg acacgagtc gatcagagc aacaagaca 
      tatcccaga tggtctctc cccaatatt acagccacc 
      tggagggaa aaatacggc actttcgga aaacaaaca 
      gtggctacc cccgaagcg aagacggcc tatcgccca 
      gccaaagct cagattacg aagacacag acgagttta 
      gcaattgta gtcaacaag tggcaacag ttcatgtgt 
      cgagtgacg ggagatcgg cgggagcgt ccggaattg 
      ttgggaaag tgcgtggtc tgagggaag acgttcaga 
      ggaaaattt caagactga agggcgatt cgaacgagc 
      agaaacgag cggatcagg cgtttccgt gctctgcaa 
      gttcggtgg aaagtttac cgagtgggt cgggatcta 
      gtacacagg ctcttgtca gggccggaa gcaatcata 
      gttcgattt caacggagg atgccgacc caagtccga 
      cggagcaaa ttgtaggga gggcgaggg ctttggttg 
      accacatac ctagtccgt acgataaag aagctttaa 
      aatataaga aaggtgata taatagata taatttcga 
      tgaatacaa gtggccaat ggcgaggca tctgccatg 
      gaaaaaagg gaacattta aatttatta atgtagagt 
      tactatcgg aacggtccg tgaaggcgc ggagagaga 
      tgaaatggc atcgcaaca ttaaaggca agcccattt 
      cggtcgagg atttgttgc agaagatca atctacagg 
      agtatatat cagtttttg tgctgaacg gctacgaag 
      atctagaac tgtttaaag aaattgaac cgtctgact 
      tggactatt tagggatcg tgaattcgg accaccgct 
      cgaaaatcc tgaccgccg tgcaacttc ttcacgatt 
      tggactcgg ggagtgaag gagacatcg ccggctcga 
      gcagcgaag gcgatgacc ataaccgca tcctggctc 
      tggaagctg gaggttcgt gttctccgt ttgggcgaa 
      gacagtttc cgcgcgact ctggttgtt acgacgctg 
      cgttgaaaa gttcccgcc agacccaca tttctccgc 
      aaggagagt cggacgcaa gtgataatg ctggatttt 
      gtgataata cgaataact tagatgctg tagtagaac 
      aatgcaata acgagatat tagcacgag tacggcaag 
      ctcaaaaga actcgatga atctgaaag aggagttgt 
      cctatcagc caaatatcc cgaattcat cgagttcgg 
      aaaaattgc aaaagaagc cgaaagatt catatgtaa 
      gtgtgcacg gacaaacca ccctaatag atccttgtc 
      gtagaaacc tccttaatc gtgctagtg gacggaaaa 
      atagcgaag atgtgtgcg aagcggatc aaaagttga 
      cttcagtca aatatgttg taggtggag gctccgaat 
      taggcctca atgaaaaca gttcagtgc ttgggagaa 
      gttgtctaa gtgaaaaat ctagtgatt cgggcatta 
      gcagtagtt cattgtctt ctgcaaatc ttaaagaat 
      gtcgccaac ccgtccttt cccaaaacg ttacagaaa 
      accctgctc acggcatct tcaatttat ctaattgtg 
      ccaatcgta ctacgtcca caactgcca ataataaag 
      agaaaactt ttaagtaaa atatttata tgtttagag 
      actttttat attattatt tattacaat cgtttagtc 
      atttttatc gcaaatatt tcaaatgga ctgtttgta 
      taaagcaat tttttaaaa gtgaatgtt gaaatcaac 
      ttatcgtga tagcaactg agatttcta aattatctg 
      tctctgttg taggcctgt acatagact ttaacgaac 
      gactgtaca ttttgtaca taactattt atttattaa 
      agcaactag tctccttgt ttttgtaca taacgagct 
      tttataagt ggttgcatt tgagttcat ttttttact 
      attgactgg atttatgtg tatttctct atacgcata 
      tcacctatt tgtacatgt tagaaagta ttaacgtta 
      tatgtcagt caataaatt tagaagatt tatttaata 
      aaacgatta taaaaca
    • >TC031001 RB
      cgtgaggtg cttgtgtgg cgatggccg gcaacatcg 
      tggccgaat ggctgcgat ccctgcacc tggggcagt 
      actccgaga gcttcatcg acaacggct acgacgacc 
      tggagatct gcaagcagg tgggcgacc ccgacctgg 
      acgccatcg gcgtcttca accccgtgc accggagcc 
      ggctgctgc agtcggtgc ggacgctgc gcgaggagg 
      gcgccgcct ccgtctact tcacgctgg aggagagtg 
      cggccgtgc acgaggagt gtttgtgtg acaatgtga 
      gtgcgaggt cctcgcgga cgtcctccg acaaggacg 
      ccgccgcct ccgacagcg gccaggagg tggccaagt 
      acctggacg agtacgagg agggcaagg ccgagctgg 
      tcaagatcc ccaggatcc agctgaaga agctgctga 
      gggagaagc tggcccacg atggaatcc ggctcagct 
      gtcagccct attcgactc cgataaagc caatttaat 
      gggtgcaaa gcaatttgt taaccattt gcgggacgc 
      cctctccgc tattagctc actaagaat tgcctccaa 
      accacctgg atgtgaatt gtggaaaat tgattccgt 
      tttcgtcgt ttttcactg tgggctgaa attgttgcc 
      agttttgtt tctcgtttt tgggtacct tgttattca 
      cacacttga tggaatacc acaccacgt gcgtgtttc 
      aaattgaca agactccgt tcataacag aaataaaga 
      actcctacg tct
    • >TC031001 RC
      cttttacct tccgcgccg cccggaata cccgacacg 
      gagaaagtc tggtctagt ttttagttc agaatttca 
      gtcatattt agatttcga ttgcaaaaa gcagaacga 
      aatgctcaa aactcaact tagaatgct agacagacg 
      aaagatcga aaagaaaat ttctggtga cggcgagcg 
      cgggtatct cgaggggct ggcgtccag atacgccga 
      cttatttag cacccacta cggggatgt tttgggtca 
      tctggaaga cttgcgtcg cattgagtg ggcagaatc 
      ctcaccccg ggagcggag tgctattac gcccggcac 
      tccacctgc caactacag ccctgtagg tggaacacc 
      cgtttcaac aggacatgg tctcacgtc atcacaatc 
      gcagcctat ttacgtacc cggaaaata ttcgccgtc 
      gagttgttt gagtgataa agaggagga cgaaatata 
      cggcttcgg atatggagt atttggagc acaaatcgc 
      aagacagca gcagcaaag gttaatggg accagcacc 
      cacgagtca tcagccact attattaca acaccagca 
      caactatca aacatgtct aagtccacg gtcggcgta 
      cttttacga atttcctcc cagtgatca aaattacac 
      caacacgag caaaaagaa aacgacttt ttcgaggtt 
      tctgcgtgg tcttaagac gtctcatcg caaagaaaa 
      acacggaac gagttctcc gaggcacgg aagggctgc 
      cactcgggg tgttcctca gagggtcga cacccctga 
      cagcgtcct ccagagcgg tctgggtct gaccgactt 
      gggccagca cgcggtgct gcgctccat ggtggaccc 
      ccgcgacta cgaccgcct ccgccacct gcagatgaa 
      cggcggcgc ccccaacac attcgaaga gacaatcta 
      caagttgaa actacaaga agctttaag gaaacggga 
      gaaattcac gaaagaaca cgaagagat cctgaggga 
      catcaagca gggtttatt gcagctggg caaggaggg 
      catccgggg gccgctgtc gggagatga cacttatat 
      gtacgacga ggacgcgcg aatgctggc tccgggcgc 
      ccacggcca cgaccgggg ccattggta tgatgaacc 
      gccgtacga aagcgaccc ggaggactt cctaatggg 
      cagtagtcc tggaccaac ggccaccat tcagaacgg 
      gcgcgtttg ctttactct gaacctgag gcaagagtc 
      ccgtgggga aggagtaat ctcgctgag aagtgccgg 
      ggacatctc ccttcctag ggacacccc caccgccac 
      cactcccag gggaactcc tagacgcgg actgattct 
      gccacaagc tggctaccc gccgaccat cattccgct 
      aaggtcgtc ccgggaccg agaaagcgg cgactacgc 
      cggttccga cgtccaaag cattagttc aagactgtc 
      aaccctctc cgtggacac gagtcgatc agagcaaca 
      agacatatc ccagatggt ctctcccca atattacag 
      ccacctgga gggaaaaat acggcactt tcggaaaac 
      aaacagtgg ctacccccg aagcgaaga cggcctatc 
      gcccagcca aagctcaga ttacgaaga cacagacga 
      gtttagcaa ttgtagtca acaagtggc aacagttca 
      tgtgtcgag tgacgggag atcggcggg agcgtccgg 
      aattgttgg gaaagtgcg tggtctgag ggaagacgt 
      tcagaggaa aatttcaag actgaaggg cgattcgaa 
      cgagcagaa acgagcgga tcaggcgtt tccgtgctc 
      tgcaagttc ggtggaaag tttaccgag tgggtcggg 
      atctagtac acaggctct tgtcagggc cggaagcaa 
      tcatagttc gatttcaac ggaggatgc cgacccaag 
      tccgacgga gcaaattgt agggagggc gagggcttt 
      ggttgacca catacctag tccgtacga taaagaagc 
      tttaaaata taagaaagg tgatataat agatataat 
      ttcgatgaa tacaagtgg ccaatggcg aggcatctg 
      ccatggaaa aaagggaac atttaaatt tattaatgt 
      agagttact atcggaacg gtccgtgaa ggcgcggag 
      agagatgaa atggcatcg caacattaa aggcaagcc 
      catttcggt cgaggattt gttgcagaa gatcaatct 
      acaggagta tatatcagt ttttgtgct gaacggcta 
      cgaagatct agaactgtt taaagaaat tgaaccgtc 
      tgacttgga ctatttagg gatcgtgaa ttcggacca 
      ccgctcgaa aatcctgac cgccgtgca acttcttca 
      cgatttgga ctcggggag tgaaggaga catcgccgg 
      ctcgagcag cgaaggcga tgaccataa ccgcatcct 
      ggctctgga agctggagg ttcgtgttc tccgtttgg 
      gcgaagaca gtttccgcg cgactctgg ttgttacga 
      cgctgcgtt gaaaagttc ccgccagac ccacatttc 
      tccgcaagg agagtcgga cgcaagtga taatgctgg 
      attttgtga taatacgaa taacttaga tgctgtagt 
      agaacaatg caataacga gatattagc acgagtacg 
      gcaagctca aaagaactc gatgaatct gaaagagga 
      gttgtccta tcagccaaa tatcccgaa ttcatcgag 
      ttcggaaaa attgcaaaa gaagccgaa agattcata 
      tgtaagtgt gcacggaca aaccaccct aatagatcc 
      ttgtcgtag aaacctcct taatcgtgc tagtggacg 
      gaaaaatag cgaagatgt gtgcgaagc ggatcaaaa 
      gttgacttc agtcaaata tgttgtagg tggaggctc 
      cgaattagg cctcaatga aaacagttc agtgcttgg 
      gagaagttg tctaagtga aaaatctag tgattcggg 
      cattagcag tagttcatt gtcttctgc aaatcttaa 
      agaatgtcg ccaacccgt cctttccca aaacgttac 
      agaaaaccc tgctcacgg catcttcaa tttatctaa 
      ttgtgccaa tcgtactac gtccacaac tgccaataa 
      taaagagaa aacttttaa gtaaaatat ttatatgtt 
      tagagactt tttatatta ttatttatt acaatcgtt 
      tagtcattt ttatcgcaa atatttcaa atggactgt 
      ttgtataaa gcaattttt taaaagtga atgttgaaa 
      tcaacttat cgtgatagc aactgagat ttctaaatt 
      atctgtctc tgttgtagg cctgtacat agactttaa 
      cgaacgact gtacatttt gtacataac tatttattt 
      attaaagca actagtctc cttgttttt gtacataac 
      gagctttta taagtggtt gcatttgag ttcattttt 
      ttactattg actggattt atgtgtatt tctctatac 
      gcatatcac ctatttgta catgttaga aagtattaa 
      cgttatatg tcagtcaat aaatttaga agatttatt 
      taataaaac gattataaa aca
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