Status
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Gene information
General information
TC009801 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007422.5: 8252540..8294430
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC009801
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
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    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
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    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_02854

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 0.0% (includes death as pupa, adult)

    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 20
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: % (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: % (includes death as larva, prepupa, pupa, adult)

    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC009801 RA
      MVLNTEWAQ VEVIDLIND GSGLAFGII GGRSTGVVV 
      KTILPGGVA DRDGRLQSG DHILQIGEV NLRGLGSEQ 
      VASVLRQCG IHVRMVVAR PVESTSADY QALGSHAPI 
      VPTKILGDP VELDRHLIE NGYAETSTH QPPSSFTTP 
      YIYSSQNSN FQLHPITGA VDVVKNPLP IGDVPAPPP 
      TTGPVITNM LPLDMALHE PNLPETETY SVELRKDDL 
      GLGITVAGY VCEREEISG IFVKSISKG SAADLTKKI 
      KINDRIVEV DGISVVGHT NHQAVELLR STGPVVSIK 
      FERYLRGPK YEQLQQAIK ANELRPPSP VSPTISSLP 
      KVPLSLVQM SYLGIEPEG ESRTSFDFD SAVLSEGPD 
      RDDEEIVID GRRSLEFSI DSHESIYDK WKEKVRDDV 
      EIVIAQMQK EPSSGLGIS LEGTVDVED GKEVRPHHY 
      IRNILPDGP VGRNKVLQA GDELLEVNG IQLMGLNHL 
      EVVSILKQL PNFVSLVCA RYPVPIRII DTSQHREAF 
      QARKILAGS LQTLIPNND RLVKAKSET SIASSFNSE 
      QCNGSRSRS LELIAGLPM WSSEPTIVE LIKGDHGLG 
      FSILDYQDP LNPQETVIV IRSLVPGGV AQLDGRLIP 
      GDRLLSVNN INVENATLD KAVQVLKGA PKGPVRIAV 
      AKPLTATDA VSHASQDTE DDQTCLEDF QECIEEYQE 
      CLEVVHICI DEDNSSFNR SASTSQIED LGQNLINAQ 
      KSLTKSDFL ENNNLLKVK QKGSIGDSD LDISYKSTN 
      DHLNNKIEC DNKITPLKT VIDNNKALN KTDSLTQSD 
      KGSNQDGYE TCIDESFSD EAPRNNNQD PEEEPTPTN 
      SKMNISAPC TDSEAVTVV TAASEPCLT EQYSNHIYL 
      DTKSDGEPK SYEWLGEDE FFLVQYSPD EVSKSYGDL 
      RPRKLTYRL KEYYNDYKD CLESYKIYT EDDKKTEMS 
      DDLIFNEIL LPFKSRSAP NIMDSSFVT LTYDPGPDR 
      GRRKSDVPP GHQPDSDAP LPMTVIKPI DSETSALRG 
      SQVEDMLQK HWGSTHTIK VYREPNASL GISIVGGKV 
      DIQSNDASD KVLGIFVKQ VVPDSPAGK LGLFKTGDR 
      ILEVSGVDL RHESHEKAV EAIRNAENP VTFVIQSLI 
      PWNCENEDE SYKSNENIC PSPFPSPVS EKAPVAFNP 
      PEITISHDD DHKEVNESE NEKLEEKVD DGNDKESEK 
      ISVPLNEAD VIIRDESLE DSEEDEEID IRYMEGRTF 
      SSKGQQIDR ASAGNYRRS KEESEADAE EEDDFGYTT 
      TPSGSSSAF QREIARTRG HIQLVMAAE PRSFSSFSS 
      RPGAGVVVC EQNQFVPFV SAWIGACWV HVQVPQNPH 
      TAGGAEINS SRFI
    • >TC009801 RB
      MVLNTEWAQ VEVIDLIND GSGLAFGII GGRSTGVVV 
      KTILPGGVA DRDGRLQSG DHILQIGEV NLRGLGSEQ 
      VASVLRQCG IHVRMVVAR PVESTSADY QALGSHAPI 
      VPTKILGDP VELDRHLIE NGYAETSTH QPPSSFTTP 
      YIYSSQNSN FQLHPITGA VDVVKNPLP IGDVPAPPP 
      TTGPVITNM LPLDMALHE PNLPETETY SVELRKDDL 
      GLGITVAGY VCEREEISG IFVKSISKG SAADLTKKI 
      KINDRIVEV DGISVVGHT NHQAVELLR STGPVVSIK 
      FERYLRGPK YEQLQQAIK ANELRPPSP VSPTISSLP 
      KVPLSLVQM SYLGIEPEG ESRTSFDFD SAVLSEGPD 
      RDDEEIVID GRRSLEFSI DSHESIYDK WKEKVRDDV 
      EIVIAQMQK EPSSGLGIS LEGTVDVED GKEVRPHHY 
      IRNILPDGP VGRNKVLQA GDELLEVNG IQLMGLNHL 
      EVVSILKQL PNFVSLVCA RYPVPIRII DTSQHREAF 
      QARKILAGS LQTLIPNND RLVKAKSET SIASSFNSE 
      QCNGSRSRS LELIAGLPM WSSEPTIVE LIKGDHGLG 
      FSILDYQDP LNPQETVIV IRSLVPGGV AQLDGRLIP 
      GDRLLSVNN INVENATLD KAVQVLKGA PKGPVRIAV 
      AKPLTATDA VSHASQFIR KILREWSEE LEYLIMDTE 
      DDQTCLEDF QECIEEYQE CLEVVHICI DEDNSSFNR 
      SASTSQIED LGQNLINAQ KSLTKSDFL ENNNLLKVK 
      QKGSIGDSD LDISYKSTN DHLNNKIEC DNKITPLKT 
      VIDNNKALN KTDSLTQSD KGSNQDGYE TCIDESFSD 
      EAPRNNNQD PEEEPTPTN SKMNISAPC TDSEAVTVV 
      TAASEPCLT EQYSNHIYL DTKSDGEPK SYEWLGEDE 
      FFLVQYSPD EVSKSYGDL RPRKLTYRL KEYYNDYKD 
      CLESYKIYT EDDKKTEMS DDLIFNEIL LPFKSRSAP 
      NIMDSSFVT LTYDPGPDR GRRKSDVPP GHQPDSDAP 
      LPMTVIKPI DSETSALRG SQVEDMLQK HWGSTHTIK 
      VYREPNASL GISIVGGKV DIQSNDASD KVLGIFVKQ 
      VVPDSPAGK LGLFKTGDR ILEVSGVDL RHESHEKAV 
      EAIRNAENP VTFVIQSLI PWNCENEDE SYKSNENIC 
      PSPFPSPVS EKAPVAFNP PEITISHDD DHKEVNESE 
      NEKLEEKVD DGNDKESEK ISVPLNEAD VIIRDESLE 
      DSEEDEEID IRYMEGRTF SSKGQQIDR ASAGNYRRS 
      KEESEADAE EEDDFGYTT TPSGSSSAF QREIARTRG 
      HIQLVMAAE PRSFSSFSS RPGAGVVVC EQNQFVPFV 
      SAWIGACWV HVQVPQNPH TAGGAEINS SRFI
    CDS sequence
    • >TC009801 RA
      atggtgttg aacaccgag tgggctcag gtagaagta 
      atcgacttg atcaacgac ggctcgggc ttggctttc 
      ggcataata gggggccgt agcaccggc gtcgtcgtc 
      aaaaccatc ctaccgggt ggtgtagcc gatcgggac 
      ggccgcctc cagagcggg gaccacatc ttgcagatc 
      ggcgaggtc aacctcagg gggctgggg tcagagcaa 
      gtggcctcg gttttgcgc cagtgtggg attcatgtg 
      cggatggtc gtcgcacgt ccggtggaa tcgacttct 
      gcagattac caggcgttg ggtagccac gcgcccatc 
      gtgccgacg aaaatcctg ggcgatccc gtcgagctc 
      gaccgtcac ctgatcgaa aacggctac gctgaaacg 
      tcgacccat caacctccg tcctctttc acaacacca 
      tacatctac tcgagccaa aactccaac ttccagtta 
      caccccatt actggagcc gtcgacgtc gtcaaaaac 
      cccttacct atcggagat gttccggca ccgccaccc 
      accaccgga cccgtcatt accaacatg ctacctctg 
      gatatggca ctgcacgag ccaaatttg ccggaaact 
      gaaacgtac tcagtggaa ctgaggaag gacgacctg 
      ggactgggg ataacggtc gcaggatac gtctgcgaa 
      agggaagaa atatctggc attttcgtg aaaagcatc 
      agcaaaggg agtgccgct gatctgacg aagaagatt 
      aaaatcaac gatcggatt gttgaggtg gatgggata 
      tcggtggtg ggccacaca aaccatcaa gcggtcgaa 
      ttgctccga agcaccggt cccgtcgta tcaataaaa 
      ttcgaaagg tatttaaga ggtcccaaa tatgaacag 
      ctgcaacaa gctattaag gcaaacgaa cttcgaccg 
      ccatcgccc gtttcaccc acgatatcg tcattgcct 
      aaagtacct ttaagttta gtgcaaatg agttatctg 
      ggaatagaa cccgagggg gaatcacgc acaagtttt 
      gattttgat tccgccgtc ctttcggaa gggccggac 
      agggacgac gaggagatc gtcatcgac ggccgaaga 
      tcgttggag tttagcatc gatagccac gagtcgatt 
      tacgacaaa tggaaggaa aaagtgcgg gatgacgtc 
      gaaattgtg atcgctcag atgcaaaaa gagccaagt 
      agtggctta gggattagt ctcgaaggc acggtcgat 
      gttgaggat ggcaaagaa gtgcggcct catcactac 
      atcagaaat attttgcct gatggcccc gttgggagg 
      aacaaagtg ctacaagcc ggtgacgaa ttgctcgag 
      gttaacggc atccaactc atgggtctc aaccactta 
      gaagtggtc tcaatacta aagcagctg ccaaatttc 
      gttagttta gtctgcgct cggtatccg gttcctatt 
      agaataatc gacacctct caacaccgg gaagctttc 
      caagctaga aaaatcctc gctggtagt ctccaaacc 
      ctcatcccc aacaacgat cgtctagtc aaagccaaa 
      tccgagacc tcaatagct tcgagtttc aacagcgag 
      cagtgcaac ggcagcaga tcgcgctcg ttggaactc 
      atcgccggc ttgcccatg tggagcagc gagcccacc 
      atcgtggaa ttaatcaaa ggcgaccat ggcttaggc 
      ttttcaata ctagattac caggaccct ctcaaccct 
      caagaaact gtgatagtt attcgatct ctcgtccct 
      ggcggagtg gcccaactc gacggccgg ctaatcccc 
      ggcgataga ctcctctct gtcaacaat atcaacgtg 
      gaaaacgcg acactggac aaggcagtg caagtgctc 
      aaaggggcg cccaaaggg cccgttcgg atcgccgtg 
      gctaagccc ttgactgcc accgatgcc gtctcgcac 
      gcgagtcag gatacggaa gatgaccaa acttgcttg 
      gaagacttc caagagtgc atcgaagaa taccaagag 
      tgtttagaa gtagttcac atatgcata gacgaagac 
      aactcatca ttcaaccgt tcggctagc acttcccaa 
      attgaagac ctcggccaa aatttaata aatgctcaa 
      aaaagttta accaaatcg gatttttta gaaaacaat 
      aatttacta aaagtcaaa cagaaaggt agcataggt 
      gatagtgat ttagacata agttacaaa agtacaaat 
      gaccattta aacaataag attgagtgt gataataaa 
      ataactcca ttaaaaact gtcatcgac aacaacaag 
      gccctgaac aagaccgac agcctcaca cagagcgac 
      aaaggctcc aaccaggac ggctacgag acctgcatc 
      gacgagtcc ttctccgac gaagccccc aggaacaac 
      aaccaggac ccggaggag gagcccacg cccaccaac 
      tccaagatg aacatatca gccccttgc accgactcg 
      gaggccgtc accgtcgtc accgccgcc tccgagccc 
      tgcctcacg gagcaatac tccaaccac atatacctc 
      gacaccaag tcggacgga gagcccaag tcctacgaa 
      tggctcggg gaggacgag ttcttcctc gtccagtac 
      tccccggac gaagtctcc aaaagctac ggagatctc 
      cggcccaga aaactcacc taccggctc aaggagtac 
      tacaacgac tacaaagac tgcctcgaa tcctacaag 
      atctacacc gaagacgac aaaaaaact gaaatgagc 
      gacgattta atttttaac gagatttta ctccctttc 
      aaaagcagg tcagctcct aatatcatg gacagttct 
      tttgtgacc ctcacttat gatccagga cccgatcgg 
      ggacgcagg aagtccgac gtgccgccg ggacaccaa 
      ccagacagt gacgcgcca ttaccaatg acggtcata 
      aaacccatt gatagtgaa accagtgcc ctgcgaggg 
      agccaagtc gaagacatg ttgcagaag cactggggc 
      tcgacccac accatcaag gtgtaccgg gagcccaac 
      gcgagcctg ggaattagc atcgttggg ggaaaagtc 
      gacattcag tcgaacgat gcgagcgat aaggttttg 
      ggtattttt gtgaagcaa gtcgttcct gacagtccc 
      gccggtaaa ctggggctg ttcaagacc ggtgataga 
      atactggaa gtaagcgga gtcgatttg agacacgaa 
      agtcacgaa aaggctgtt gaggcgatt agaaatgcg 
      gaaaatccg gttactttt gttattcaa tcattgatt 
      ccttggaat tgtgaaaat gaagatgag tcgtacaaa 
      agcaacgaa aatatttgc ccttcgccc ttcccatcg 
      cccgtcagt gaaaaagca ccggttgca tttaatcca 
      cccgagatt accatatct catgatgac gatcataaa 
      gaagtaaat gagtcggaa aatgaaaaa ttggaagaa 
      aaggtagat gatggaaat gacaaagaa agtgaaaaa 
      atttcagtt ccattgaac gaagccgat gttattatt 
      agagacgaa tcgcttgaa gacagtgag gaagatgaa 
      gaaatcgat attaggtat atggaagga agaacgttt 
      tcgtcgaaa ggacagcag atcgatagg gcaagtgct 
      ggaaattac agaagaagc aaagaagaa tcggaggct 
      gatgctgag gaagaggac gattttgga tatacaact 
      actccttct ggtagcagc agcgcgttt cagcgggag 
      attgcgcgt acacgcggc cacatccag ctggtcatg 
      gccgcggag ccgcggagt ttcagcagt ttcagtagc 
      cggcctggt gcaggcgtc gttgtttgc gagcagaac 
      caatttgtg ccctttgtg agtgcgtgg ataggtgcg 
      tgctgggtg catgtgcag gtgccgcag aaccctcac 
      accgcagga ggggccgag attaactcc tcgcgtttt 
      atttag
    • >TC009801 RB
      atggtgttg aacaccgag tgggctcag gtagaagta 
      atcgacttg atcaacgac ggctcgggc ttggctttc 
      ggcataata gggggccgt agcaccggc gtcgtcgtc 
      aaaaccatc ctaccgggt ggtgtagcc gatcgggac 
      ggccgcctc cagagcggg gaccacatc ttgcagatc 
      ggcgaggtc aacctcagg gggctgggg tcagagcaa 
      gtggcctcg gttttgcgc cagtgtggg attcatgtg 
      cggatggtc gtcgcacgt ccggtggaa tcgacttct 
      gcagattac caggcgttg ggtagccac gcgcccatc 
      gtgccgacg aaaatcctg ggcgatccc gtcgagctc 
      gaccgtcac ctgatcgaa aacggctac gctgaaacg 
      tcgacccat caacctccg tcctctttc acaacacca 
      tacatctac tcgagccaa aactccaac ttccagtta 
      caccccatt actggagcc gtcgacgtc gtcaaaaac 
      cccttacct atcggagat gttccggca ccgccaccc 
      accaccgga cccgtcatt accaacatg ctacctctg 
      gatatggca ctgcacgag ccaaatttg ccggaaact 
      gaaacgtac tcagtggaa ctgaggaag gacgacctg 
      ggactgggg ataacggtc gcaggatac gtctgcgaa 
      agggaagaa atatctggc attttcgtg aaaagcatc 
      agcaaaggg agtgccgct gatctgacg aagaagatt 
      aaaatcaac gatcggatt gttgaggtg gatgggata 
      tcggtggtg ggccacaca aaccatcaa gcggtcgaa 
      ttgctccga agcaccggt cccgtcgta tcaataaaa 
      ttcgaaagg tatttaaga ggtcccaaa tatgaacag 
      ctgcaacaa gctattaag gcaaacgaa cttcgaccg 
      ccatcgccc gtttcaccc acgatatcg tcattgcct 
      aaagtacct ttaagttta gtgcaaatg agttatctg 
      ggaatagaa cccgagggg gaatcacgc acaagtttt 
      gattttgat tccgccgtc ctttcggaa gggccggac 
      agggacgac gaggagatc gtcatcgac ggccgaaga 
      tcgttggag tttagcatc gatagccac gagtcgatt 
      tacgacaaa tggaaggaa aaagtgcgg gatgacgtc 
      gaaattgtg atcgctcag atgcaaaaa gagccaagt 
      agtggctta gggattagt ctcgaaggc acggtcgat 
      gttgaggat ggcaaagaa gtgcggcct catcactac 
      atcagaaat attttgcct gatggcccc gttgggagg 
      aacaaagtg ctacaagcc ggtgacgaa ttgctcgag 
      gttaacggc atccaactc atgggtctc aaccactta 
      gaagtggtc tcaatacta aagcagctg ccaaatttc 
      gttagttta gtctgcgct cggtatccg gttcctatt 
      agaataatc gacacctct caacaccgg gaagctttc 
      caagctaga aaaatcctc gctggtagt ctccaaacc 
      ctcatcccc aacaacgat cgtctagtc aaagccaaa 
      tccgagacc tcaatagct tcgagtttc aacagcgag 
      cagtgcaac ggcagcaga tcgcgctcg ttggaactc 
      atcgccggc ttgcccatg tggagcagc gagcccacc 
      atcgtggaa ttaatcaaa ggcgaccat ggcttaggc 
      ttttcaata ctagattac caggaccct ctcaaccct 
      caagaaact gtgatagtt attcgatct ctcgtccct 
      ggcggagtg gcccaactc gacggccgg ctaatcccc 
      ggcgataga ctcctctct gtcaacaat atcaacgtg 
      gaaaacgcg acactggac aaggcagtg caagtgctc 
      aaaggggcg cccaaaggg cccgttcgg atcgccgtg 
      gctaagccc ttgactgcc accgatgcc gtctcgcac 
      gcgagtcag ttcatacgg aaaatttta cgagaatgg 
      tcggaagaa ctggaatac ctgattatg gatacggaa 
      gatgaccaa acttgcttg gaagacttc caagagtgc 
      atcgaagaa taccaagag tgtttagaa gtagttcac 
      atatgcata gacgaagac aactcatca ttcaaccgt 
      tcggctagc acttcccaa attgaagac ctcggccaa 
      aatttaata aatgctcaa aaaagttta accaaatcg 
      gatttttta gaaaacaat aatttacta aaagtcaaa 
      cagaaaggt agcataggt gatagtgat ttagacata 
      agttacaaa agtacaaat gaccattta aacaataag 
      attgagtgt gataataaa ataactcca ttaaaaact 
      gtcatcgac aacaacaag gccctgaac aagaccgac 
      agcctcaca cagagcgac aaaggctcc aaccaggac 
      ggctacgag acctgcatc gacgagtcc ttctccgac 
      gaagccccc aggaacaac aaccaggac ccggaggag 
      gagcccacg cccaccaac tccaagatg aacatatca 
      gccccttgc accgactcg gaggccgtc accgtcgtc 
      accgccgcc tccgagccc tgcctcacg gagcaatac 
      tccaaccac atatacctc gacaccaag tcggacgga 
      gagcccaag tcctacgaa tggctcggg gaggacgag 
      ttcttcctc gtccagtac tccccggac gaagtctcc 
      aaaagctac ggagatctc cggcccaga aaactcacc 
      taccggctc aaggagtac tacaacgac tacaaagac 
      tgcctcgaa tcctacaag atctacacc gaagacgac 
      aaaaaaact gaaatgagc gacgattta atttttaac 
      gagatttta ctccctttc aaaagcagg tcagctcct 
      aatatcatg gacagttct tttgtgacc ctcacttat 
      gatccagga cccgatcgg ggacgcagg aagtccgac 
      gtgccgccg ggacaccaa ccagacagt gacgcgcca 
      ttaccaatg acggtcata aaacccatt gatagtgaa 
      accagtgcc ctgcgaggg agccaagtc gaagacatg 
      ttgcagaag cactggggc tcgacccac accatcaag 
      gtgtaccgg gagcccaac gcgagcctg ggaattagc 
      atcgttggg ggaaaagtc gacattcag tcgaacgat 
      gcgagcgat aaggttttg ggtattttt gtgaagcaa 
      gtcgttcct gacagtccc gccggtaaa ctggggctg 
      ttcaagacc ggtgataga atactggaa gtaagcgga 
      gtcgatttg agacacgaa agtcacgaa aaggctgtt 
      gaggcgatt agaaatgcg gaaaatccg gttactttt 
      gttattcaa tcattgatt ccttggaat tgtgaaaat 
      gaagatgag tcgtacaaa agcaacgaa aatatttgc 
      ccttcgccc ttcccatcg cccgtcagt gaaaaagca 
      ccggttgca tttaatcca cccgagatt accatatct 
      catgatgac gatcataaa gaagtaaat gagtcggaa 
      aatgaaaaa ttggaagaa aaggtagat gatggaaat 
      gacaaagaa agtgaaaaa atttcagtt ccattgaac 
      gaagccgat gttattatt agagacgaa tcgcttgaa 
      gacagtgag gaagatgaa gaaatcgat attaggtat 
      atggaagga agaacgttt tcgtcgaaa ggacagcag 
      atcgatagg gcaagtgct ggaaattac agaagaagc 
      aaagaagaa tcggaggct gatgctgag gaagaggac 
      gattttgga tatacaact actccttct ggtagcagc 
      agcgcgttt cagcgggag attgcgcgt acacgcggc 
      cacatccag ctggtcatg gccgcggag ccgcggagt 
      ttcagcagt ttcagtagc cggcctggt gcaggcgtc 
      gttgtttgc gagcagaac caatttgtg ccctttgtg 
      agtgcgtgg ataggtgcg tgctgggtg catgtgcag 
      gtgccgcag aaccctcac accgcagga ggggccgag 
      attaactcc tcgcgtttt atttag
    mRNA sequence
    • >TC009801 RA
      caccggcgc cgcgatttg gtgttccgt cgtcacttg 
      cacacatta cacgacgtc caagaagct gactccgga 
      tccgcctca ctcaaggtc tggaatcgc aaaatggag 
      caaacatcg agtcgaaaa gttcaacac acgttacga 
      ctactttaa aatcattga tgttgcaca aagctcgct 
      cgataatga tcggcaacg cgcaggaaa cgctttcag 
      atattcaca acggcacaa aggatcgga agctgtatc 
      gcacgcaga tgaaatact ggactaatt aaagtcctt 
      catcgacat ggtgttgaa caccgagtg ggctcaggt 
      agaagtaat cgacttgat caacgacgg ctcgggctt 
      ggctttcgg cataatagg gggccgtag caccggcgt 
      cgtcgtcaa aaccatcct accgggtgg tgtagccga 
      tcgggacgg ccgcctcca gagcgggga ccacatctt 
      gcagatcgg cgaggtcaa cctcagggg gctggggtc 
      agagcaagt ggcctcggt tttgcgcca gtgtgggat 
      tcatgtgcg gatggtcgt cgcacgtcc ggtggaatc 
      gacttctgc agattacca ggcgttggg tagccacgc 
      gcccatcgt gccgacgaa aatcctggg cgatcccgt 
      cgagctcga ccgtcacct gatcgaaaa cggctacgc 
      tgaaacgtc gacccatca acctccgtc ctctttcac 
      aacaccata catctactc gagccaaaa ctccaactt 
      ccagttaca ccccattac tggagccgt cgacgtcgt 
      caaaaaccc cttacctat cggagatgt tccggcacc 
      gccacccac caccggacc cgtcattac caacatgct 
      acctctgga tatggcact gcacgagcc aaatttgcc 
      ggaaactga aacgtactc agtggaact gaggaagga 
      cgacctggg actggggat aacggtcgc aggatacgt 
      ctgcgaaag ggaagaaat atctggcat tttcgtgaa 
      aagcatcag caaagggag tgccgctga tctgacgaa 
      gaagattaa aatcaacga tcggattgt tgaggtgga 
      tgggatatc ggtggtggg ccacacaaa ccatcaagc 
      ggtcgaatt gctccgaag caccggtcc cgtcgtatc 
      aataaaatt cgaaaggta tttaagagg tcccaaata 
      tgaacagct gcaacaagc tattaaggc aaacgaact 
      tcgaccgcc atcgcccgt ttcacccac gatatcgtc 
      attgcctaa agtaccttt aagtttagt gcaaatgag 
      ttatctggg aatagaacc cgaggggga atcacgcac 
      aagttttga ttttgattc cgccgtcct ttcggaagg 
      gccggacag ggacgacga ggagatcgt catcgacgg 
      ccgaagatc gttggagtt tagcatcga tagccacga 
      gtcgattta cgacaaatg gaaggaaaa agtgcggga 
      tgacgtcga aattgtgat cgctcagat gcaaaaaga 
      gccaagtag tggcttagg gattagtct cgaaggcac 
      ggtcgatgt tgaggatgg caaagaagt gcggcctca 
      tcactacat cagaaatat tttgcctga tggccccgt 
      tgggaggaa caaagtgct acaagccgg tgacgaatt 
      gctcgaggt taacggcat ccaactcat gggtctcaa 
      ccacttaga agtggtctc aatactaaa gcagctgcc 
      aaatttcgt tagtttagt ctgcgctcg gtatccggt 
      tcctattag aataatcga cacctctca acaccggga 
      agctttcca agctagaaa aatcctcgc tggtagtct 
      ccaaaccct catccccaa caacgatcg tctagtcaa 
      agccaaatc cgagacctc aatagcttc gagtttcaa 
      cagcgagca gtgcaacgg cagcagatc gcgctcgtt 
      ggaactcat cgccggctt gcccatgtg gagcagcga 
      gcccaccat cgtggaatt aatcaaagg cgaccatgg 
      cttaggctt ttcaatact agattacca ggaccctct 
      caaccctca agaaactgt gatagttat tcgatctct 
      cgtccctgg cggagtggc ccaactcga cggccggct 
      aatccccgg cgatagact cctctctgt caacaatat 
      caacgtgga aaacgcgac actggacaa ggcagtgca 
      agtgctcaa aggggcgcc caaagggcc cgttcggat 
      cgccgtggc taagccctt gactgccac cgatgccgt 
      ctcgcacgc gagtcagga tacggaaga tgaccaaac 
      ttgcttgga agacttcca agagtgcat cgaagaata 
      ccaagagtg tttagaagt agttcacat atgcataga 
      cgaagacaa ctcatcatt caaccgttc ggctagcac 
      ttcccaaat tgaagacct cggccaaaa tttaataaa 
      tgctcaaaa aagtttaac caaatcgga ttttttaga 
      aaacaataa tttactaaa agtcaaaca gaaaggtag 
      cataggtga tagtgattt agacataag ttacaaaag 
      tacaaatga ccatttaaa caataagat tgagtgtga 
      taataaaat aactccatt aaaaactgt catcgacaa 
      caacaaggc cctgaacaa gaccgacag cctcacaca 
      gagcgacaa aggctccaa ccaggacgg ctacgagac 
      ctgcatcga cgagtcctt ctccgacga agcccccag 
      gaacaacaa ccaggaccc ggaggagga gcccacgcc 
      caccaactc caagatgaa catatcagc cccttgcac 
      cgactcgga ggccgtcac cgtcgtcac cgccgcctc 
      cgagccctg cctcacgga gcaatactc caaccacat 
      atacctcga caccaagtc ggacggaga gcccaagtc 
      ctacgaatg gctcgggga ggacgagtt cttcctcgt 
      ccagtactc cccggacga agtctccaa aagctacgg 
      agatctccg gcccagaaa actcaccta ccggctcaa 
      ggagtacta caacgacta caaagactg cctcgaatc 
      ctacaagat ctacaccga agacgacaa aaaaactga 
      aatgagcga cgatttaat ttttaacga gattttact 
      ccctttcaa aagcaggtc agctcctaa tatcatgga 
      cagttcttt tgtgaccct cacttatga tccaggacc 
      cgatcgggg acgcaggaa gtccgacgt gccgccggg 
      acaccaacc agacagtga cgcgccatt accaatgac 
      ggtcataaa acccattga tagtgaaac cagtgccct 
      gcgagggag ccaagtcga agacatgtt gcagaagca 
      ctggggctc gacccacac catcaaggt gtaccggga 
      gcccaacgc gagcctggg aattagcat cgttggggg 
      aaaagtcga cattcagtc gaacgatgc gagcgataa 
      ggttttggg tatttttgt gaagcaagt cgttcctga 
      cagtcccgc cggtaaact ggggctgtt caagaccgg 
      tgatagaat actggaagt aagcggagt cgatttgag 
      acacgaaag tcacgaaaa ggctgttga ggcgattag 
      aaatgcgga aaatccggt tacttttgt tattcaatc 
      attgattcc ttggaattg tgaaaatga agatgagtc 
      gtacaaaag caacgaaaa tatttgccc ttcgccctt 
      cccatcgcc cgtcagtga aaaagcacc ggttgcatt 
      taatccacc cgagattac catatctca tgatgacga 
      tcataaaga agtaaatga gtcggaaaa tgaaaaatt 
      ggaagaaaa ggtagatga tggaaatga caaagaaag 
      tgaaaaaat ttcagttcc attgaacga agccgatgt 
      tattattag agacgaatc gcttgaaga cagtgagga 
      agatgaaga aatcgatat taggtatat ggaaggaag 
      aacgttttc gtcgaaagg acagcagat cgatagggc 
      aagtgctgg aaattacag aagaagcaa agaagaatc 
      ggaggctga tgctgagga agaggacga ttttggata 
      tacaactac tccttctgg tagcagcag cgcgtttca 
      gcgggagat tgcgcgtac acgcggcca catccagct 
      ggtcatggc cgcggagcc gcggagttt cagcagttt 
      cagtagccg gcctggtgc aggcgtcgt tgtttgcga 
      gcagaacca atttgtgcc ctttgtgag tgcgtggat 
      aggtgcgtg ctgggtgca tgtgcaggt gccgcagaa 
      ccctcacac cgcaggagg ggccgagat taactcctc 
      gcgttttat ttaggaccg actaaatcc aattcggtg 
      cgaaaatca attatcaga gagaaaaaa tcggagccg 
      tgtggtgat tgttttgcg aattagtcc gacactttt 
      aatcccttt ggccggata agaggaggg tcggttgaa 
      ggcattctc gcacacttt atgcttgtt ttaatcttc 
      ctaataatt ctcccgaaa attgcagca attgtgtgc 
      atctgaaac gagcttaaa ttccgctaa tgcaataaa 
      aggattcat ttcataatt ttccgaagc gcactttat 
      tgctcgtcg atttcttta cgaaaatta tctcaaatt 
      atccgaatt attcaaacg taaaatttt ttaacgagc 
      tcttttgtg tttaaaatt cgtaatttt gcatccata 
      tacggggat taattgctt aatgctcac atgacggtg 
      attattttc tctactccc tgatgactt cattattgg 
      ctattaatt tcaaaataa tggcacata acataatct 
      agaataata gggacaaat gtttaatta aataaaaaa 
      tattttgca ca
    • >TC009801 RB
      caccggcgc cgcgatttg gtgttccgt cgtcacttg 
      cacacatta cacgacgtc caagaagct gactccgga 
      tccgcctca ctcaaggtc tggaatcgc aaaatggag 
      caaacatcg agtcgaaaa gttcaacac acgttacga 
      ctactttaa aatcattga tgttgcaca aagctcgct 
      cgataatga tcggcaacg cgcaggaaa cgctttcag 
      atattcaca acggcacaa aggatcgga agctgtatc 
      gcacgcaga tgaaatact ggactaatt aaagtcctt 
      catcgacat ggtgttgaa caccgagtg ggctcaggt 
      agaagtaat cgacttgat caacgacgg ctcgggctt 
      ggctttcgg cataatagg gggccgtag caccggcgt 
      cgtcgtcaa aaccatcct accgggtgg tgtagccga 
      tcgggacgg ccgcctcca gagcgggga ccacatctt 
      gcagatcgg cgaggtcaa cctcagggg gctggggtc 
      agagcaagt ggcctcggt tttgcgcca gtgtgggat 
      tcatgtgcg gatggtcgt cgcacgtcc ggtggaatc 
      gacttctgc agattacca ggcgttggg tagccacgc 
      gcccatcgt gccgacgaa aatcctggg cgatcccgt 
      cgagctcga ccgtcacct gatcgaaaa cggctacgc 
      tgaaacgtc gacccatca acctccgtc ctctttcac 
      aacaccata catctactc gagccaaaa ctccaactt 
      ccagttaca ccccattac tggagccgt cgacgtcgt 
      caaaaaccc cttacctat cggagatgt tccggcacc 
      gccacccac caccggacc cgtcattac caacatgct 
      acctctgga tatggcact gcacgagcc aaatttgcc 
      ggaaactga aacgtactc agtggaact gaggaagga 
      cgacctggg actggggat aacggtcgc aggatacgt 
      ctgcgaaag ggaagaaat atctggcat tttcgtgaa 
      aagcatcag caaagggag tgccgctga tctgacgaa 
      gaagattaa aatcaacga tcggattgt tgaggtgga 
      tgggatatc ggtggtggg ccacacaaa ccatcaagc 
      ggtcgaatt gctccgaag caccggtcc cgtcgtatc 
      aataaaatt cgaaaggta tttaagagg tcccaaata 
      tgaacagct gcaacaagc tattaaggc aaacgaact 
      tcgaccgcc atcgcccgt ttcacccac gatatcgtc 
      attgcctaa agtaccttt aagtttagt gcaaatgag 
      ttatctggg aatagaacc cgaggggga atcacgcac 
      aagttttga ttttgattc cgccgtcct ttcggaagg 
      gccggacag ggacgacga ggagatcgt catcgacgg 
      ccgaagatc gttggagtt tagcatcga tagccacga 
      gtcgattta cgacaaatg gaaggaaaa agtgcggga 
      tgacgtcga aattgtgat cgctcagat gcaaaaaga 
      gccaagtag tggcttagg gattagtct cgaaggcac 
      ggtcgatgt tgaggatgg caaagaagt gcggcctca 
      tcactacat cagaaatat tttgcctga tggccccgt 
      tgggaggaa caaagtgct acaagccgg tgacgaatt 
      gctcgaggt taacggcat ccaactcat gggtctcaa 
      ccacttaga agtggtctc aatactaaa gcagctgcc 
      aaatttcgt tagtttagt ctgcgctcg gtatccggt 
      tcctattag aataatcga cacctctca acaccggga 
      agctttcca agctagaaa aatcctcgc tggtagtct 
      ccaaaccct catccccaa caacgatcg tctagtcaa 
      agccaaatc cgagacctc aatagcttc gagtttcaa 
      cagcgagca gtgcaacgg cagcagatc gcgctcgtt 
      ggaactcat cgccggctt gcccatgtg gagcagcga 
      gcccaccat cgtggaatt aatcaaagg cgaccatgg 
      cttaggctt ttcaatact agattacca ggaccctct 
      caaccctca agaaactgt gatagttat tcgatctct 
      cgtccctgg cggagtggc ccaactcga cggccggct 
      aatccccgg cgatagact cctctctgt caacaatat 
      caacgtgga aaacgcgac actggacaa ggcagtgca 
      agtgctcaa aggggcgcc caaagggcc cgttcggat 
      cgccgtggc taagccctt gactgccac cgatgccgt 
      ctcgcacgc gagtcagtt catacggaa aattttacg 
      agaatggtc ggaagaact ggaatacct gattatgga 
      tacggaaga tgaccaaac ttgcttgga agacttcca 
      agagtgcat cgaagaata ccaagagtg tttagaagt 
      agttcacat atgcataga cgaagacaa ctcatcatt 
      caaccgttc ggctagcac ttcccaaat tgaagacct 
      cggccaaaa tttaataaa tgctcaaaa aagtttaac 
      caaatcgga ttttttaga aaacaataa tttactaaa 
      agtcaaaca gaaaggtag cataggtga tagtgattt 
      agacataag ttacaaaag tacaaatga ccatttaaa 
      caataagat tgagtgtga taataaaat aactccatt 
      aaaaactgt catcgacaa caacaaggc cctgaacaa 
      gaccgacag cctcacaca gagcgacaa aggctccaa 
      ccaggacgg ctacgagac ctgcatcga cgagtcctt 
      ctccgacga agcccccag gaacaacaa ccaggaccc 
      ggaggagga gcccacgcc caccaactc caagatgaa 
      catatcagc cccttgcac cgactcgga ggccgtcac 
      cgtcgtcac cgccgcctc cgagccctg cctcacgga 
      gcaatactc caaccacat atacctcga caccaagtc 
      ggacggaga gcccaagtc ctacgaatg gctcgggga 
      ggacgagtt cttcctcgt ccagtactc cccggacga 
      agtctccaa aagctacgg agatctccg gcccagaaa 
      actcaccta ccggctcaa ggagtacta caacgacta 
      caaagactg cctcgaatc ctacaagat ctacaccga 
      agacgacaa aaaaactga aatgagcga cgatttaat 
      ttttaacga gattttact ccctttcaa aagcaggtc 
      agctcctaa tatcatgga cagttcttt tgtgaccct 
      cacttatga tccaggacc cgatcgggg acgcaggaa 
      gtccgacgt gccgccggg acaccaacc agacagtga 
      cgcgccatt accaatgac ggtcataaa acccattga 
      tagtgaaac cagtgccct gcgagggag ccaagtcga 
      agacatgtt gcagaagca ctggggctc gacccacac 
      catcaaggt gtaccggga gcccaacgc gagcctggg 
      aattagcat cgttggggg aaaagtcga cattcagtc 
      gaacgatgc gagcgataa ggttttggg tatttttgt 
      gaagcaagt cgttcctga cagtcccgc cggtaaact 
      ggggctgtt caagaccgg tgatagaat actggaagt 
      aagcggagt cgatttgag acacgaaag tcacgaaaa 
      ggctgttga ggcgattag aaatgcgga aaatccggt 
      tacttttgt tattcaatc attgattcc ttggaattg 
      tgaaaatga agatgagtc gtacaaaag caacgaaaa 
      tatttgccc ttcgccctt cccatcgcc cgtcagtga 
      aaaagcacc ggttgcatt taatccacc cgagattac 
      catatctca tgatgacga tcataaaga agtaaatga 
      gtcggaaaa tgaaaaatt ggaagaaaa ggtagatga 
      tggaaatga caaagaaag tgaaaaaat ttcagttcc 
      attgaacga agccgatgt tattattag agacgaatc 
      gcttgaaga cagtgagga agatgaaga aatcgatat 
      taggtatat ggaaggaag aacgttttc gtcgaaagg 
      acagcagat cgatagggc aagtgctgg aaattacag 
      aagaagcaa agaagaatc ggaggctga tgctgagga 
      agaggacga ttttggata tacaactac tccttctgg 
      tagcagcag cgcgtttca gcgggagat tgcgcgtac 
      acgcggcca catccagct ggtcatggc cgcggagcc 
      gcggagttt cagcagttt cagtagccg gcctggtgc 
      aggcgtcgt tgtttgcga gcagaacca atttgtgcc 
      ctttgtgag tgcgtggat aggtgcgtg ctgggtgca 
      tgtgcaggt gccgcagaa ccctcacac cgcaggagg 
      ggccgagat taactcctc gcgttttat ttaggaccg 
      actaaatcc aattcggtg cgaaaatca attatcaga 
      gagaaaaaa tcggagccg tgtggtgat tgttttgcg 
      aattagtcc gacactttt aatcccttt ggccggata 
      agaggaggg tcggttgaa ggcattctc gcacacttt 
      atgcttgtt ttaatcttc ctaataatt ctcccgaaa 
      attgcagca attgtgtgc atctgaaac gagcttaaa 
      ttccgctaa tgcaataaa aggattcat ttcataatt 
      ttccgaagc gcactttat tgctcgtcg atttcttta 
      cgaaaatta tctcaaatt atccgaatt attcaaacg 
      taaaatttt ttaacgagc tcttttgtg tttaaaatt 
      cgtaatttt gcatccata tacggggat taattgctt 
      aatgctcac atgacggtg attattttc tctactccc 
      tgatgactt cattattgg ctattaatt tcaaaataa 
      tggcacata acataatct agaataata gggacaaat 
      gtttaatta aataaaaaa tattttgca ca
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY