Status
Please wait ...
Gene information
General information
TC001371 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007417.3: 15122601..15138307
Sequence information
Transcripts / Proteins (3) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC001371
    Gene ontology

    GO terms for Tribolium

    • {{ goTerm.term }}
      ({{ goTerm.evidence }}){{ goTerm.evidenceTooltip }}
      {{goTerm.showAll ? '[-]' : '[+]'}}
      Status: {{ goTerm.status }}
      Evidence: {{ goTerm.evidence }} ({{ goTerm.evidenceTooltip }})
      Reference: {{ goTerm.referenceText }}
      Quotation: {{ goTerm.quotation }}
      Submitter: {{ goTerm.name }}

    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
    {{ blurIdResult }}
    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
      {{ unavailableText }}

    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_02675

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 40.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 2 (3 dpi)
    Days post injection


    adult lethality - Number of animals showing the phenotype: 2 (9 dpi)
    Days post injection


    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 50
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 20.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 20.0% (includes death as larva, prepupa, pupa, adult)

    larva lethality - Number of animals showing the phenotype: 2 (11 dpi)
    Days post injection


    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC001371 RA
      MYPTPARHP SAAGPPPQG GQLKFTIAD TLERIKEEF 
      NFLQAQYHT LKLECEKLA SEKTEMQRH YVMYYEMSY 
      GLNVEMHKQ TEIAKRLNA IIAQVLPFL AQEHQQQVA 
      TAVERAKQV TMTELNAII GQQQQQGLQ QLLQQIHAQ 
      QLPHGPHGP GLPIGPHPG LPGMAPAAA AGLLGFGAG 
      LGAGVPGAP TGPHASVTG GAHPLLKSA DLHSREAVD 
      IKPGSANAE ERLNSVSPG DRDKYRSRS PPDVEQDVK 
      RRKEDKLGH ESDGEKSDQ DLVVDVANE EASSPHTNG 
      DHAPLSNSG VEIRENGST NGDKIKVER PPSRSGSSS 
      SRSTPSLKS KDEKPLTPG SKPRSTTPN LGATPGASG 
      PKVALGQYP PYSLAAPRE HLSPYNNVA PSYGRPPLM 
      GYDGHPHAR TPGIATNGL SSIPGGKPA YSFHMNGEG 
      QLQPVPFPT DALIGPGIP RHARQINTL NHGEVVCAV 
      TISNPTKYV YTGGKGCVK VWDISQPGS KTPVSQLDC 
      LQRDNYIRS VKLLPDGRT LIVGGEASN LSIWDLASP 
      TPRIKAELT SSAPACYAL AISPDSKVC FSCCSDGNI 
      AVWDLHNQT LVRQFQGHT DGASCIDIS SDGTKLWTG 
      GLDNTVRSW DLREGKQLQ QHDFSSQIF SLGYCPTGE 
      WLAVGMENS HVEVLHALK PDKYQLHLH ESCVLSLRF 
      ATCGKWFVS TGKDNLLNA WRTPYGASI FQVI
    • >TC001371 RB
      MYPTPARHP SAAGPPPQG GQLKFTIAD TLERIKEEF 
      NFLQAQYHT LKLECEKLA SEKTEMQRH YVMYYEMSY 
      GLNVEMHKQ TEIAKRLNA IIAQVLPFL AQEHQQQVA 
      TAVERAKQV TMTELNAII GQQQQQGLQ QLLQQIHAQ 
      QLPHGPHGP GLPIGPHPG LPGMAPAAA AGLLGFGAG 
      LGAGVPGAP TGPHASVTG GAHPLLKSA DLHSREAVD 
      IKPGSANAE ERLNSVSPG DRDKYRSRS PPDVEQDVK 
      RRKEDKLGH ESDGEKSDQ DLVVDVANE EASSPHTNG 
      DHAPLSNSG VEIRENGST NGDKIKVER PPSRSGSSS 
      SRSTPSLKS KDEKPLTPG SKPRSTTPN LGATPGASG 
      PKVALGQYP PYSLAAPRE HLSPYNNVA PSYGRPPLM 
      GYDGHPHAR TPGIATNGL SSIPGGKPA YSFHMNGEG 
      QLQPVPFPT DALIGPGIP RHARQINTL NHGEVVCAV 
      TISNPTKYV YTGGKGCVK VWDISQPGS KTPVSQLDC 
      LQRDNYIRS VKLLPDGRT LIVGGEASN LSIWDLASP 
      TPRIKAELT SSAPACYAL AISPDSKVC FSCCSDGNI 
      AVWDLHNQT LVRQFQGHT DGASCIDIS SDGTKLWTG 
      GLDNTVRSW DLREGKQLQ QHDFSSQIF SLGYCPTGE 
      WLAVGMENS HVEVLHALK PDKYQLHLH ESCVLSLRF 
      ATCGKWFVS TGKDNLLNA WRTPYGASI FQSKESSSV 
      LSCDISTDD KYIVTGSGD KKATVYEVI Y
    • >TC001371 RC
      MFKTGPPPQ GGQLKFTIA DTLERIKEE FNFLQAQYH 
      TLKLECEKL ASEKTEMQR HYVMYYEMS YGLNVEMHK 
      QTEIAKRLN AIIAQVLPF LAQEHQQQV ATAVERAKQ 
      VTMTELNAI IGQQQQQGL QQLLQQIHA QQLPHGPHG 
      PGLPIGPHP GLPGMAPAA AAGLLGFGA GLGAGVPGA 
      PTGPHASVT GGAHPLLKS ADLHSREAV DIKPGSANA 
      EERLNSVSP GDRDKYRSR SPPDVEQDV KRRKEDKLG 
      HESDGEKSD QDLVVDVAN EEASSPHTN GDHAPLSNS 
      GVEIRENGS TNGDKIKVE RPPSRSGSS SSRSTPSLK 
      SKDEKPLTP GSKPRSTTP NLGATPGAS GPKVALGQY 
      PPYSLAAPR EHLSPYNNV APSYGRPPL MGYDGHPHA 
      RTPGIATNG LSSIPGGKP AYSFHMNGE GQLQPVPFP 
      TDALIGPGI PRHARQINT LNHGEVVCA VTISNPTKY 
      VYTGGKGCV KVWDISQPG SKTPVSQLD CLQRDNYIR 
      SVKLLPDGR TLIVGGEAS NLSIWDLAS PTPRIKAEL 
      TSSAPACYA LAISPDSKV CFSCCSDGN IAVWDLHNQ 
      TLVRQFQGH TDGASCIDI SSDGTKLWT GGLDNTVRS 
      WDLREGKQL QQHDFSSQI FSLGYCPTG EWLAVGMEN 
      SHVEVLHAL KPDKYQLHL HESCVLSLR FATCGKWFV 
      STGKDNLLN AWRTPYGAS IFQVI
    CDS sequence
    • >TC001371 RA
      atgtacccc acccctgca aggcatcca tcggccgcg 
      ggaccacca cctcaaggt ggtcaactc aaattcacc 
      attgccgac actctggaa cggattaag gaagaattc 
      aacttcctt caagcccaa tatcacacg ctcaaatta 
      gagtgtgaa aaactggct agtgaaaag actgaaatg 
      caacggcac tacgttatg tattacgaa atgtcttat 
      ggccttaac gtagaaatg cataaacag actgaaatc 
      gcaaaacgc ttaaacgca attatcgcc caagtgctg 
      ccgtttctg gcccaagaa catcaacag caagtggca 
      acggcagtc gaaagagcc aaacaagtc acgatgact 
      gaacttaat gcaataatt gggcaacaa caacaacaa 
      ggtcttcaa caattgctt caacagatc cacgcccaa 
      caactccct catggtcct cacggtcca ggcttaccc 
      atcggtcct catcccggc cttccagga atggcacca 
      gccgctgct gctggtctt ttgggattt ggggcggga 
      ttaggagcg ggtgttcca ggagcacca acaggacca 
      cacgcttct gtaaccgga ggcgctcat cctttacta 
      aaatcagca gatctccat tccagggaa gccgtcgac 
      atcaaacct ggatcggct aatgccgaa gaaagactg 
      aattctgtt tcgcccgga gacagagat aaatacaga 
      tcgagatcg ccgccagac gtggaacag gatgtcaag 
      agacggaaa gaagataaa ttaggccat gagagcgac 
      ggcgagaag agtgaccaa gacctagtt gtggacgtc 
      gccaacgag gaagcctcc tccccgcac accaacggt 
      gatcacgcc ccccttagc aattccggt gtcgaaatc 
      cgtgaaaac ggcagcaca aacggcgat aaaatcaaa 
      gtggaacgg cctccaagt cgtagcggc tcctcctcg 
      tcccgcagc accccatcc ctcaaaagt aaagatgaa 
      aaacccctg actccgggc tcaaaaccc cgttctacg 
      acaccgaat ctaggtgcg acacctgga gccagcggc 
      cccaaagtc gcactggga caatatccc ccttacagt 
      ttggcagcc ccccgtgaa caccttagt ccttataat 
      aacgtagca ccatcgtac ggacgtcca cctttaatg 
      ggttacgat ggacatccg catgcacgg actcctgga 
      attgcaacg aacggttta agttcgatt ccaggaggt 
      aaaccggcc tattcgttt catatgaac ggtgaagga 
      caattacaa ccggtgccg tttccgacc gatgcgctc 
      atcggaccg gggattccc cgacatgcg cgacaaatt 
      aatacatta aatcatggc gaagttgtg tgtgctgtg 
      accatctcg aatccgacc aaatatgtc tatacgggg 
      ggcaaaggc tgtgttaaa gtctgggac atcagtcag 
      ccagggtcc aagacaccg gtgtctcaa ctggactgc 
      ttgcaaagg gataactac atccgctct gtgaagctc 
      ctcccggac gggcgcacc ctcatcgtc gggggcgaa 
      gccagcaac ttgtccatt tgggacctc gccagcccc 
      acaccacgt atcaaagcc gaactgacc tctagtgcc 
      cccgcgtgc tacgccctc gctatcagc cccgactcg 
      aaagtgtgt ttcagttgt tgttcggac ggaaatatc 
      gccgtttgg gaccttcac aatcagact ttagtgcgt 
      caatttcaa ggacatacg gatggtgct tcgtgtatt 
      gatatttcg tccgatggt acgaaatta tggacgggc 
      ggtttagat aatacagtg cgaagttgg gacttacgt 
      gaaggcaaa caactgcaa cagcacgac ttcagttcg 
      cagattttc tcgttaggg tattgtccg acgggagag 
      tggttggct gtaggaatg gagaactca cacgttgaa 
      gtgttgcac gcgttaaaa ccggacaaa taccaattg 
      catctgcac gaaagttgt gttcttagt ttaaggttt 
      gccacgtgc ggaaagtgg tttgtgtcg acgggcaag 
      gacaatttg cttaatgcg tggcggacg ccctatgga 
      gccagcata ttccaggta atttga
    • >TC001371 RB
      atgtacccc acccctgca aggcatcca tcggccgcg 
      ggaccacca cctcaaggt ggtcaactc aaattcacc 
      attgccgac actctggaa cggattaag gaagaattc 
      aacttcctt caagcccaa tatcacacg ctcaaatta 
      gagtgtgaa aaactggct agtgaaaag actgaaatg 
      caacggcac tacgttatg tattacgaa atgtcttat 
      ggccttaac gtagaaatg cataaacag actgaaatc 
      gcaaaacgc ttaaacgca attatcgcc caagtgctg 
      ccgtttctg gcccaagaa catcaacag caagtggca 
      acggcagtc gaaagagcc aaacaagtc acgatgact 
      gaacttaat gcaataatt gggcaacaa caacaacaa 
      ggtcttcaa caattgctt caacagatc cacgcccaa 
      caactccct catggtcct cacggtcca ggcttaccc 
      atcggtcct catcccggc cttccagga atggcacca 
      gccgctgct gctggtctt ttgggattt ggggcggga 
      ttaggagcg ggtgttcca ggagcacca acaggacca 
      cacgcttct gtaaccgga ggcgctcat cctttacta 
      aaatcagca gatctccat tccagggaa gccgtcgac 
      atcaaacct ggatcggct aatgccgaa gaaagactg 
      aattctgtt tcgcccgga gacagagat aaatacaga 
      tcgagatcg ccgccagac gtggaacag gatgtcaag 
      agacggaaa gaagataaa ttaggccat gagagcgac 
      ggcgagaag agtgaccaa gacctagtt gtggacgtc 
      gccaacgag gaagcctcc tccccgcac accaacggt 
      gatcacgcc ccccttagc aattccggt gtcgaaatc 
      cgtgaaaac ggcagcaca aacggcgat aaaatcaaa 
      gtggaacgg cctccaagt cgtagcggc tcctcctcg 
      tcccgcagc accccatcc ctcaaaagt aaagatgaa 
      aaacccctg actccgggc tcaaaaccc cgttctacg 
      acaccgaat ctaggtgcg acacctgga gccagcggc 
      cccaaagtc gcactggga caatatccc ccttacagt 
      ttggcagcc ccccgtgaa caccttagt ccttataat 
      aacgtagca ccatcgtac ggacgtcca cctttaatg 
      ggttacgat ggacatccg catgcacgg actcctgga 
      attgcaacg aacggttta agttcgatt ccaggaggt 
      aaaccggcc tattcgttt catatgaac ggtgaagga 
      caattacaa ccggtgccg tttccgacc gatgcgctc 
      atcggaccg gggattccc cgacatgcg cgacaaatt 
      aatacatta aatcatggc gaagttgtg tgtgctgtg 
      accatctcg aatccgacc aaatatgtc tatacgggg 
      ggcaaaggc tgtgttaaa gtctgggac atcagtcag 
      ccagggtcc aagacaccg gtgtctcaa ctggactgc 
      ttgcaaagg gataactac atccgctct gtgaagctc 
      ctcccggac gggcgcacc ctcatcgtc gggggcgaa 
      gccagcaac ttgtccatt tgggacctc gccagcccc 
      acaccacgt atcaaagcc gaactgacc tctagtgcc 
      cccgcgtgc tacgccctc gctatcagc cccgactcg 
      aaagtgtgt ttcagttgt tgttcggac ggaaatatc 
      gccgtttgg gaccttcac aatcagact ttagtgcgt 
      caatttcaa ggacatacg gatggtgct tcgtgtatt 
      gatatttcg tccgatggt acgaaatta tggacgggc 
      ggtttagat aatacagtg cgaagttgg gacttacgt 
      gaaggcaaa caactgcaa cagcacgac ttcagttcg 
      cagattttc tcgttaggg tattgtccg acgggagag 
      tggttggct gtaggaatg gagaactca cacgttgaa 
      gtgttgcac gcgttaaaa ccggacaaa taccaattg 
      catctgcac gaaagttgt gttcttagt ttaaggttt 
      gccacgtgc ggaaagtgg tttgtgtcg acgggcaag 
      gacaatttg cttaatgcg tggcggacg ccctatgga 
      gccagcata ttccagtcg aaagaatcg tcaagtgta 
      ttgagttgt gacatttca acggacgat aaatacatt 
      gtgacgggc tctggtgat aagaaggcc acagtttac 
      gaagtgatt tattaa
    • >TC001371 RC
      atgtttaaa acgggacca ccacctcaa ggtggtcaa 
      ctcaaattc accattgcc gacactctg gaacggatt 
      aaggaagaa ttcaacttc cttcaagcc caatatcac 
      acgctcaaa ttagagtgt gaaaaactg gctagtgaa 
      aagactgaa atgcaacgg cactacgtt atgtattac 
      gaaatgtct tatggcctt aacgtagaa atgcataaa 
      cagactgaa atcgcaaaa cgcttaaac gcaattatc 
      gcccaagtg ctgccgttt ctggcccaa gaacatcaa 
      cagcaagtg gcaacggca gtcgaaaga gccaaacaa 
      gtcacgatg actgaactt aatgcaata attgggcaa 
      caacaacaa caaggtctt caacaattg cttcaacag 
      atccacgcc caacaactc cctcatggt cctcacggt 
      ccaggctta cccatcggt cctcatccc ggccttcca 
      ggaatggca ccagccgct gctgctggt cttttggga 
      tttggggcg ggattagga gcgggtgtt ccaggagca 
      ccaacagga ccacacgct tctgtaacc ggaggcgct 
      catccttta ctaaaatca gcagatctc cattccagg 
      gaagccgtc gacatcaaa cctggatcg gctaatgcc 
      gaagaaaga ctgaattct gtttcgccc ggagacaga 
      gataaatac agatcgaga tcgccgcca gacgtggaa 
      caggatgtc aagagacgg aaagaagat aaattaggc 
      catgagagc gacggcgag aagagtgac caagaccta 
      gttgtggac gtcgccaac gaggaagcc tcctccccg 
      cacaccaac ggtgatcac gcccccctt agcaattcc 
      ggtgtcgaa atccgtgaa aacggcagc acaaacggc 
      gataaaatc aaagtggaa cggcctcca agtcgtagc 
      ggctcctcc tcgtcccgc agcacccca tccctcaaa 
      agtaaagat gaaaaaccc ctgactccg ggctcaaaa 
      ccccgttct acgacaccg aatctaggt gcgacacct 
      ggagccagc ggccccaaa gtcgcactg ggacaatat 
      cccccttac agtttggca gccccccgt gaacacctt 
      agtccttat aataacgta gcaccatcg tacggacgt 
      ccaccttta atgggttac gatggacat ccgcatgca 
      cggactcct ggaattgca acgaacggt ttaagttcg 
      attccagga ggtaaaccg gcctattcg tttcatatg 
      aacggtgaa ggacaatta caaccggtg ccgtttccg 
      accgatgcg ctcatcgga ccggggatt ccccgacat 
      gcgcgacaa attaataca ttaaatcat ggcgaagtt 
      gtgtgtgct gtgaccatc tcgaatccg accaaatat 
      gtctatacg gggggcaaa ggctgtgtt aaagtctgg 
      gacatcagt cagccaggg tccaagaca ccggtgtct 
      caactggac tgcttgcaa agggataac tacatccgc 
      tctgtgaag ctcctcccg gacgggcgc accctcatc 
      gtcgggggc gaagccagc aacttgtcc atttgggac 
      ctcgccagc cccacacca cgtatcaaa gccgaactg 
      acctctagt gcccccgcg tgctacgcc ctcgctatc 
      agccccgac tcgaaagtg tgtttcagt tgttgttcg 
      gacggaaat atcgccgtt tgggacctt cacaatcag 
      actttagtg cgtcaattt caaggacat acggatggt 
      gcttcgtgt attgatatt tcgtccgat ggtacgaaa 
      ttatggacg ggcggttta gataataca gtgcgaagt 
      tgggactta cgtgaaggc aaacaactg caacagcac 
      gacttcagt tcgcagatt ttctcgtta gggtattgt 
      ccgacggga gagtggttg gctgtagga atggagaac 
      tcacacgtt gaagtgttg cacgcgtta aaaccggac 
      aaataccaa ttgcatctg cacgaaagt tgtgttctt 
      agtttaagg tttgccacg tgcggaaag tggtttgtg 
      tcgacgggc aaggacaat ttgcttaat gcgtggcgg 
      acgccctat ggagccagc atattccag gtaatttga
    mRNA sequence
    • >TC001371 RA
      cggcagatg agcccggac tcgaggtat ggtcgtatg 
      tgttgcttt tccgccctt gttaaacaa tggcttcga 
      attttcctc ctccttgtc gctgaattt gaggaaaag 
      aaaatagta atgcgtgtg ttgtgtgcc atgggatta 
      agtgaagtt tttagagtg tgatagata gaagtgatg 
      agtagctga tagaggtga gagcgtgac caacatgta 
      ccccacccc tgcaaggca tccatcggc cgcgggacc 
      accacctca aggtggtca actcaaatt caccattgc 
      cgacactct ggaacggat taaggaaga attcaactt 
      ccttcaagc ccaatatca cacgctcaa attagagtg 
      tgaaaaact ggctagtga aaagactga aatgcaacg 
      gcactacgt tatgtatta cgaaatgtc ttatggcct 
      taacgtaga aatgcataa acagactga aatcgcaaa 
      acgcttaaa cgcaattat cgcccaagt gctgccgtt 
      tctggccca agaacatca acagcaagt ggcaacggc 
      agtcgaaag agccaaaca agtcacgat gactgaact 
      taatgcaat aattgggca acaacaaca acaaggtct 
      tcaacaatt gcttcaaca gatccacgc ccaacaact 
      ccctcatgg tcctcacgg tccaggctt acccatcgg 
      tcctcatcc cggccttcc aggaatggc accagccgc 
      tgctgctgg tcttttggg atttggggc gggattagg 
      agcgggtgt tccaggagc accaacagg accacacgc 
      ttctgtaac cggaggcgc tcatccttt actaaaatc 
      agcagatct ccattccag ggaagccgt cgacatcaa 
      acctggatc ggctaatgc cgaagaaag actgaattc 
      tgtttcgcc cggagacag agataaata cagatcgag 
      atcgccgcc agacgtgga acaggatgt caagagacg 
      gaaagaaga taaattagg ccatgagag cgacggcga 
      gaagagtga ccaagacct agttgtgga cgtcgccaa 
      cgaggaagc ctcctcccc gcacaccaa cggtgatca 
      cgcccccct tagcaattc cggtgtcga aatccgtga 
      aaacggcag cacaaacgg cgataaaat caaagtgga 
      acggcctcc aagtcgtag cggctcctc ctcgtcccg 
      cagcacccc atccctcaa aagtaaaga tgaaaaacc 
      cctgactcc gggctcaaa accccgttc tacgacacc 
      gaatctagg tgcgacacc tggagccag cggccccaa 
      agtcgcact gggacaata tccccctta cagtttggc 
      agccccccg tgaacacct tagtcctta taataacgt 
      agcaccatc gtacggacg tccaccttt aatgggtta 
      cgatggaca tccgcatgc acggactcc tggaattgc 
      aacgaacgg tttaagttc gattccagg aggtaaacc 
      ggcctattc gtttcatat gaacggtga aggacaatt 
      acaaccggt gccgtttcc gaccgatgc gctcatcgg 
      accggggat tccccgaca tgcgcgaca aattaatac 
      attaaatca tggcgaagt tgtgtgtgc tgtgaccat 
      ctcgaatcc gaccaaata tgtctatac ggggggcaa 
      aggctgtgt taaagtctg ggacatcag tcagccagg 
      gtccaagac accggtgtc tcaactgga ctgcttgca 
      aagggataa ctacatccg ctctgtgaa gctcctccc 
      ggacgggcg caccctcat cgtcggggg cgaagccag 
      caacttgtc catttggga cctcgccag ccccacacc 
      acgtatcaa agccgaact gacctctag tgcccccgc 
      gtgctacgc cctcgctat cagccccga ctcgaaagt 
      gtgtttcag ttgttgttc ggacggaaa tatcgccgt 
      ttgggacct tcacaatca gactttagt gcgtcaatt 
      tcaaggaca tacggatgg tgcttcgtg tattgatat 
      ttcgtccga tggtacgaa attatggac gggcggttt 
      agataatac agtgcgaag ttgggactt acgtgaagg 
      caaacaact gcaacagca cgacttcag ttcgcagat 
      tttctcgtt agggtattg tccgacggg agagtggtt 
      ggctgtagg aatggagaa ctcacacgt tgaagtgtt 
      gcacgcgtt aaaaccgga caaatacca attgcatct 
      gcacgaaag ttgtgttct tagtttaag gtttgccac 
      gtgcggaaa gtggtttgt gtcgacggg caaggacaa 
      tttgcttaa tgcgtggcg gacgcccta tggagccag 
      catattcca ggtaatttg aaaagtttg tggttaggc 
      tcgaagttt ggacataat aaagcgaaa atccttcat 
      tttttcggg tacatacca caaattcaa gccatttac 
      ctccggatt gcagtttca gtggccgaa acacaacat 
      ttttttatg ttttttcac taaaaacgc acaaaaatt 
      gtaagacgc gtctttttg aaattattt acaagaatt 
      aaagaatta atacgattt tcgctttgt tgatgcttt 
      taatattgt gtgtgacat actatattt ttgttgcag 
      tcgaaagaa tcgtcaagt gtattgagt tgtgacatt 
      tcaacggac gataaatac attgtgacg ggctctggt 
      gataagaag gccacagtt tacgaagtg atttattaa 
      atttcgcgg ggccagata ggacatttc caccaacat 
      gacaattat tttccactg tgacaatgt tttacacat 
      tgctacagt ttctacgaa ttatataga gtctacttt 
      gtactgacg aatcattag taaaattga ataaacggg 
      aaacaagtg atgattatt ttatggttt tctttgatt 
      cgaaaaaaa ttgtacgat atttgttat ttgtttatt 
      caaaatgtt gttattatg tgtgtgaat taggtgtct 
      caaacgcaa agattatgt agcatattt ttcgtatta 
      aataaaaat acaagacat at
    • >TC001371 RB
      cggcagatg agcccggac tcgaggtat ggtcgtatg 
      tgttgcttt tccgccctt gttaaacaa tggcttcga 
      attttcctc ctccttgtc gctgaattt gaggaaaag 
      aaaatagta atgcgtgtg ttgtgtgcc atgggatta 
      agtgaagtt tttagagtg tgatagata gaagtgatg 
      agtagctga tagaggtga gagcgtgac caacatgta 
      ccccacccc tgcaaggca tccatcggc cgcgggacc 
      accacctca aggtggtca actcaaatt caccattgc 
      cgacactct ggaacggat taaggaaga attcaactt 
      ccttcaagc ccaatatca cacgctcaa attagagtg 
      tgaaaaact ggctagtga aaagactga aatgcaacg 
      gcactacgt tatgtatta cgaaatgtc ttatggcct 
      taacgtaga aatgcataa acagactga aatcgcaaa 
      acgcttaaa cgcaattat cgcccaagt gctgccgtt 
      tctggccca agaacatca acagcaagt ggcaacggc 
      agtcgaaag agccaaaca agtcacgat gactgaact 
      taatgcaat aattgggca acaacaaca acaaggtct 
      tcaacaatt gcttcaaca gatccacgc ccaacaact 
      ccctcatgg tcctcacgg tccaggctt acccatcgg 
      tcctcatcc cggccttcc aggaatggc accagccgc 
      tgctgctgg tcttttggg atttggggc gggattagg 
      agcgggtgt tccaggagc accaacagg accacacgc 
      ttctgtaac cggaggcgc tcatccttt actaaaatc 
      agcagatct ccattccag ggaagccgt cgacatcaa 
      acctggatc ggctaatgc cgaagaaag actgaattc 
      tgtttcgcc cggagacag agataaata cagatcgag 
      atcgccgcc agacgtgga acaggatgt caagagacg 
      gaaagaaga taaattagg ccatgagag cgacggcga 
      gaagagtga ccaagacct agttgtgga cgtcgccaa 
      cgaggaagc ctcctcccc gcacaccaa cggtgatca 
      cgcccccct tagcaattc cggtgtcga aatccgtga 
      aaacggcag cacaaacgg cgataaaat caaagtgga 
      acggcctcc aagtcgtag cggctcctc ctcgtcccg 
      cagcacccc atccctcaa aagtaaaga tgaaaaacc 
      cctgactcc gggctcaaa accccgttc tacgacacc 
      gaatctagg tgcgacacc tggagccag cggccccaa 
      agtcgcact gggacaata tccccctta cagtttggc 
      agccccccg tgaacacct tagtcctta taataacgt 
      agcaccatc gtacggacg tccaccttt aatgggtta 
      cgatggaca tccgcatgc acggactcc tggaattgc 
      aacgaacgg tttaagttc gattccagg aggtaaacc 
      ggcctattc gtttcatat gaacggtga aggacaatt 
      acaaccggt gccgtttcc gaccgatgc gctcatcgg 
      accggggat tccccgaca tgcgcgaca aattaatac 
      attaaatca tggcgaagt tgtgtgtgc tgtgaccat 
      ctcgaatcc gaccaaata tgtctatac ggggggcaa 
      aggctgtgt taaagtctg ggacatcag tcagccagg 
      gtccaagac accggtgtc tcaactgga ctgcttgca 
      aagggataa ctacatccg ctctgtgaa gctcctccc 
      ggacgggcg caccctcat cgtcggggg cgaagccag 
      caacttgtc catttggga cctcgccag ccccacacc 
      acgtatcaa agccgaact gacctctag tgcccccgc 
      gtgctacgc cctcgctat cagccccga ctcgaaagt 
      gtgtttcag ttgttgttc ggacggaaa tatcgccgt 
      ttgggacct tcacaatca gactttagt gcgtcaatt 
      tcaaggaca tacggatgg tgcttcgtg tattgatat 
      ttcgtccga tggtacgaa attatggac gggcggttt 
      agataatac agtgcgaag ttgggactt acgtgaagg 
      caaacaact gcaacagca cgacttcag ttcgcagat 
      tttctcgtt agggtattg tccgacggg agagtggtt 
      ggctgtagg aatggagaa ctcacacgt tgaagtgtt 
      gcacgcgtt aaaaccgga caaatacca attgcatct 
      gcacgaaag ttgtgttct tagtttaag gtttgccac 
      gtgcggaaa gtggtttgt gtcgacggg caaggacaa 
      tttgcttaa tgcgtggcg gacgcccta tggagccag 
      catattcca gtcgaaaga atcgtcaag tgtattgag 
      ttgtgacat ttcaacgga cgataaata cattgtgac 
      gggctctgg tgataagaa ggccacagt ttacgaagt 
      gatttatta aatttcgcg gggccagat aggacattt 
      ccaccaaca tgacaatta ttttccact gtgacaatg 
      ttttacaca ttgctacag tttctacga attatatag 
      agtctactt tgtactgac gaatcatta gtaaaattg 
      aataaacgg gaaacaagt gatgattat tttatggtt 
      ttctttgat tcgaaaaaa attgtacga tatttgtta 
      tttgtttat tcaaaatgt tgttattat gtgtgtgaa 
      ttaggtgtc tcaaacgca aagattatg tagcatatt 
      tttcgtatt aaataaaaa tacaagaca tat
    • >TC001371 RC
      cggcagatg agcccggac tcgaggtat ggtcgtatg 
      tgttgcttt tccgccctt gttaaacaa tggcttcga 
      attttcctc ctccttgtc gctgaattt gaggaaaag 
      aaaatagta atgcgtgtg ttgtgtgcc atgggatta 
      agtgaagtt tttagagtg tgatagata gaagtgatg 
      agtagctga tagaggtga gagcgtgac caacatgta 
      ccccacccc tgcaaggca tccatcggc cgcggggtg 
      ccatccccc tctctacaa gcaaccctc aaacaacga 
      ctactgcga ctgttagtt tagtctgtg tctctccgt 
      tgacagctg acggtcaac tgacgacgc gcgaaatga 
      aacaaaacg ttgtgtgcc ttgtacgaa ttttttgga 
      ttttttact cgacagact aaaacatgt ttaaaacgg 
      gaccaccac ctcaaggtg gtcaactca aattcacca 
      ttgccgaca ctctggaac ggattaagg aagaattca 
      acttccttc aagcccaat atcacacgc tcaaattag 
      agtgtgaaa aactggcta gtgaaaaga ctgaaatgc 
      aacggcact acgttatgt attacgaaa tgtcttatg 
      gccttaacg tagaaatgc ataaacaga ctgaaatcg 
      caaaacgct taaacgcaa ttatcgccc aagtgctgc 
      cgtttctgg cccaagaac atcaacagc aagtggcaa 
      cggcagtcg aaagagcca aacaagtca cgatgactg 
      aacttaatg caataattg ggcaacaac aacaacaag 
      gtcttcaac aattgcttc aacagatcc acgcccaac 
      aactccctc atggtcctc acggtccag gcttaccca 
      tcggtcctc atcccggcc ttccaggaa tggcaccag 
      ccgctgctg ctggtcttt tgggatttg gggcgggat 
      taggagcgg gtgttccag gagcaccaa caggaccac 
      acgcttctg taaccggag gcgctcatc ctttactaa 
      aatcagcag atctccatt ccagggaag ccgtcgaca 
      tcaaacctg gatcggcta atgccgaag aaagactga 
      attctgttt cgcccggag acagagata aatacagat 
      cgagatcgc cgccagacg tggaacagg atgtcaaga 
      gacggaaag aagataaat taggccatg agagcgacg 
      gcgagaaga gtgaccaag acctagttg tggacgtcg 
      ccaacgagg aagcctcct ccccgcaca ccaacggtg 
      atcacgccc cccttagca attccggtg tcgaaatcc 
      gtgaaaacg gcagcacaa acggcgata aaatcaaag 
      tggaacggc ctccaagtc gtagcggct cctcctcgt 
      cccgcagca ccccatccc tcaaaagta aagatgaaa 
      aacccctga ctccgggct caaaacccc gttctacga 
      caccgaatc taggtgcga cacctggag ccagcggcc 
      ccaaagtcg cactgggac aatatcccc cttacagtt 
      tggcagccc cccgtgaac accttagtc cttataata 
      acgtagcac catcgtacg gacgtccac ctttaatgg 
      gttacgatg gacatccgc atgcacgga ctcctggaa 
      ttgcaacga acggtttaa gttcgattc caggaggta 
      aaccggcct attcgtttc atatgaacg gtgaaggac 
      aattacaac cggtgccgt ttccgaccg atgcgctca 
      tcggaccgg ggattcccc gacatgcgc gacaaatta 
      atacattaa atcatggcg aagttgtgt gtgctgtga 
      ccatctcga atccgacca aatatgtct atacggggg 
      gcaaaggct gtgttaaag tctgggaca tcagtcagc 
      cagggtcca agacaccgg tgtctcaac tggactgct 
      tgcaaaggg ataactaca tccgctctg tgaagctcc 
      tcccggacg ggcgcaccc tcatcgtcg ggggcgaag 
      ccagcaact tgtccattt gggacctcg ccagcccca 
      caccacgta tcaaagccg aactgacct ctagtgccc 
      ccgcgtgct acgccctcg ctatcagcc ccgactcga 
      aagtgtgtt tcagttgtt gttcggacg gaaatatcg 
      ccgtttggg accttcaca atcagactt tagtgcgtc 
      aatttcaag gacatacgg atggtgctt cgtgtattg 
      atatttcgt ccgatggta cgaaattat ggacgggcg 
      gtttagata atacagtgc gaagttggg acttacgtg 
      aaggcaaac aactgcaac agcacgact tcagttcgc 
      agattttct cgttagggt attgtccga cgggagagt 
      ggttggctg taggaatgg agaactcac acgttgaag 
      tgttgcacg cgttaaaac cggacaaat accaattgc 
      atctgcacg aaagttgtg ttcttagtt taaggtttg 
      ccacgtgcg gaaagtggt ttgtgtcga cgggcaagg 
      acaatttgc ttaatgcgt ggcggacgc cctatggag 
      ccagcatat tccaggtaa tttgaaaag tttgtggtt 
      aggctcgaa gtttggaca taataaagc gaaaatcct 
      tcatttttt cgggtacat accacaaat tcaagccat 
      ttacctccg gattgcagt ttcagtggc cgaaacaca 
      acatttttt tatgttttt tcactaaaa acgcacaaa 
      aattgtaag acgcgtctt tttgaaatt atttacaag 
      aattaaaga attaatacg attttcgct ttgttgatg 
      cttttaata ttgtgtgtg acatactat atttttgtt 
      gcagtcgaa agaatcgtc aagtgtatt gagttgtga 
      catttcaac ggacgataa atacattgt gacgggctc 
      tggtgataa gaaggccac agtttacga agtgattta 
      ttaaatttc gcggggcca gataggaca tttccacca 
      acatgacaa ttattttcc actgtgaca atgttttac 
      acattgcta cagtttcta cgaattata tagagtcta 
      ctttgtact gacgaatca ttagtaaaa ttgaataaa 
      cgggaaaca agtgatgat tattttatg gttttcttt 
      gattcgaaa aaaattgta cgatatttg ttatttgtt 
      tattcaaaa tgttgttat tatgtgtgt gaattaggt 
      gtctcaaac gcaaagatt atgtagcat atttttcgt 
      attaaataa aaatacaag acatat
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY