Status
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Gene information
General information
TC001297 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007417.3: 14108541..14125761
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC001297
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
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    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.
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    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_02672

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 30.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 2 (3 dpi)
    Days post injection


    adult lethality - Number of animals showing the phenotype: 1 (9 dpi)
    Days post injection


    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: < 20
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 10.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 40.0% (includes death as larva, prepupa, pupa, adult)

    pupal molt delayed (still larva) - Number of animals showing the phenotype: 2 (11 dpi)
    Days post injection


    adult lethality - Number of animals showing the phenotype: 1 (16 dpi)
    Days post injection


    eclosion delayed (still pupa) - Number of animals showing the phenotype: 2 (16 dpi)
    Days post injection


    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC001297 RA
      MASEKYSII QSNGQRIYK PAPSSAAPP PKGSEIFVG 
      NIPRDLFED ELIPLFSQV APIYKFRLM MDFTGNTRG 
      FAFVTYYNV WDAQKAVLK FNKYCIASN TRKSQLTVH 
      LSLDNCRLF FGNVPKDKT RDDIENELK KFIDGIVKV 
      ITYPERNAH HFNRGFAFV EFQSHAIAA IARRKLLAD 
      GVIRPWGRK LYVDWAEPE PMVDPDVMT QVKVLYMKN 
      VPTFWTLDR LKTYISKTV GEIFIERIY KRDNYAFIH 
      FDERSFAER ALKIFDSVS QYLSFNGKQ IEVEWARPS 
      CYSKKNRIN EVPDNFCTS VPPRLRKLV RQSKKENKL 
      GSTDSSSCS SESDILMHA DLIETENLA AHIAPSSVV 
      GSVDNCAMS SLNLRNHAF LKSPPMDHQ VIQVNGQRI 
      YSPCASSGI RPPPKGTEI FIGNLPPDL YEDELIPLF 
      SQKGPIYNL RLMMDFFGR TRGYGFISY FTQEDAHAA 
      VAAFNNYKI RNKGKIAVS MSVDNRRLF IGNIPRHVT 
      LSEIQSVLE KYVEGIVDI IFYHEPYND SINRGFIFV 
      EFESHRLAA IARRQLSPG NLTIWGKPI FVDWAEPLP 
      VVNPQILKQ VTKLYLSNL PMTLSSEEL KSFLCELLD 
      PSHIIKVHK INNFAFVHF TLRKYAEEA FRKLTGLVM 
      MDKLIGVEW ARPIEYSKQ YRLEKLPDN FCKSVPPAQ 
      RKLCHLATL LKTAEELKI KGLAEVSWR DEDQQNADS 
      NNVNGVQTA LPQVSTVMD NPKNEAPSN KRKRGRPPI 
      DDYEQAFTT PKIMNVTGN ADETYSNDA MSTSDHDLS 
      IWEEEPSAN EGGDITEPD EPLLRVKKE TSPHDDDIL 
      IDDSGDYSP NDSKHDTSR TGSMKSLNV TTSGTQSFL 
      TPALEKEWP DVIKMNDYL NTGRRQQFW EEPFTKRVM 
      DAIKTKNLE MKVAAELLG VSYGTLYGR YRDSYGCLK 
      HPYRVRDFW SEQGPTDVL LKLKKKEIT LYRAAEQLN 
      VTPQTLSNY LISMSQIDN SSEANVSNQ SNAMESYEE 
      ADSDEEGDT VLPDVPSSN NTSLFKNLL SNAINTSTS 
      SNSVLANCP DITIIKKEK HEGKVNNNS DHSDSNSDQ 
      TK
    • >TC001297 RB
      MASEKYSII QSNGQRIYK PAPSSAAPP PKGSEIFVG 
      NIPRDLFED ELIPLFSQV APIYKFRLM MDFTGNTRG 
      FAFVTYYNV WDAQKAVLK FNKYCIASN TRKSQLTVH 
      LSLDNCRLF FGNVPKDKT RDDIENELK KFIDGIVKV 
      ITYPERNAH HFNRGFAFV EFQSHAIAA IARRKLLAD 
      GVIRPWGRK LYVDWAEPE PMVDPDVMT QVKVLYMKN 
      VPTFWTLDR LKTYISKTV GEIFIERIY KRDNYAFIH 
      FDERSFAER ALKIFDSVS QYLSFNGKQ IEVEWARPS 
      CYSKKNRIN EVPDNFCTS VPPRLRKLV RQSKKENKL 
      GSTDSSSCS SESDILMHA DLIETENLA AHIAPSSVV 
      GSVDNCAMS SLNLRNHAF LKSPPMDHQ VIQVNGQRI 
      YSPCASSGI RPPPKGTEI FIGNLPPDL YEDELIPLF 
      SQKGPIYNL RLMMDFFGR TRGYGFISY FTQEDAHAA 
      VAAFNNYKI RNKGKIAVS MSVDNRRLF IGNIPRHVT 
      LSEIQSVLE KYVEGIVDI IFYHEPYND SINRGFIFV 
      EFESHRLAA IARRQLSPG NLTIWGKPI FVDWAEPLP 
      VVNPQILKQ VTKLYLSNL PMTLSSEEL KSFLCELLD 
      PSHIIKVHK INNFAFVHF TLRKYAEEA FRKLTGLVM 
      MDKLIGVEW ARPIEYSKQ YRLEKLPDN FCKSVPPAQ 
      RKLCHLATL LKTAEELKI KGLAEVSWR DEDQQNADS 
      NNVNGVQTA LPQVSTVMD NPKNEAPSN KRKRGRPPI 
      DDYEQAFTT PKIMNVTGN ADETYSNDA MSTSDHDLS 
      IWEEEPSAN EGGDITEPD EPLLRVKKE TSPHDDDIL 
      IDDSGDYSP NDSKHDTSR TGSMKSLNV TTSGTQSFL 
      TPALEKEWP DVIKMNDYL NTGRRQQFW EEPFTKRVM 
      DAIKTKNLE MKVAAELLG VSYGTLYGR YRDSYGCLK 
      HPYRTSNAS EGSSSVPES GNEVRDFWS EQGPTDVLL 
      KLKKKEITL YRAAEQLNV TPQTLSNYL ISMSQIDNS 
      SEANVSNQS NAMESYEEA DSDEEGDTV LPDVPSSNN 
      TSLFKNLLS NAINTSTSS NSVLANCPD ITIIKKEKH 
      EGKVNNNSD HSDSNSDQT K
    CDS sequence
    • >TC001297 RA
      atggcttct gaaaaatac tcaatcatc caaagcaac 
      ggccagagg atctacaag ccggcacca tcctcagcg 
      gcgcctcca ccaaaaggt agcgagatc ttcgtgggc 
      aacatccca cgcgacctc ttcgaagac gagctcatt 
      ccactgttc tcccaagtg gcccccatt tacaagttc 
      agacttatg atggacttt actgggaac accagaggc 
      ttcgctttt gttacttat tacaacgtg tgggacgct 
      caaaaggca gttttgaaa ttcaataaa tattgcatt 
      gcgagtaac acgagaaag tcgcaatta acggtccat 
      ctttcactc gataactgt cgtctgttc tttggtaat 
      gtgcccaaa gataaaact agagatgat attgaaaat 
      gaactaaag aaatttatc gatgggatt gttaaagtg 
      attacttat ccggaacga aatgcccat cattttaat 
      cgagggttt gcttttgtg gagttccaa tcgcacgcc 
      attgcagcc attgcaaga agaaagctg ttggctgat 
      ggggtgatt agaccatgg ggaaggaag ctttacgtt 
      gattgggca gaaccggaa cccatggtc gacccagac 
      gttatgacg caggtgaaa gttttgtac atgaaaaat 
      gtgcccacc ttctggacg ttggaccgt ttaaaaacc 
      tacatctcg aaaactgtc ggcgaaata tttatcgaa 
      agaatttac aagagggat aactatgcc ttcatccac 
      tttgatgaa agatcattc gcagaaagg gctttaaaa 
      attttcgat tctgtttcc caatatctg agtttcaac 
      ggaaaacaa attgaagtg gagtgggcg cgaccgtcc 
      tgctacagc aaaaaaaat aggataaat gaggtccct 
      gataatttc tgcacctct gtgcctccc agacttcgt 
      aaactcgtt cgacaaagt aagaaagaa aataaattg 
      ggttcaact gattccagt tcttgcagc agcgagagc 
      gatattctt atgcatgcc gacttgatt gaaaccgaa 
      aacttagcg gcgcatatt gctccatca tctgtggtg 
      ggtagtgtc gataattgt gcaatgtct tcgttaaat 
      ttacggaac cacgcattt ttaaaatca ccacccatg 
      gaccatcaa gttattcaa gtcaatggc caacgcatt 
      tactccccg tgtgcatct tccggaatc cgccctccg 
      ccaaaagga acggaaatt ttcatcgga aacctcccc 
      ccggattta tacgaagac gaactcatc cccctattc 
      agccaaaaa ggccctatt tacaaccta agactcatg 
      atggacttc ttcggacgt acccgaggg tacggtttc 
      atttcgtac ttcacacaa gaagatgct catgccgct 
      gtggcagct tttaataat tataagatt agaaataag 
      ggcaagatt gctgtttca atgtcggtg gataatcgc 
      cggttgttt atcggaaat ataccaaga cacgttact 
      ttgagcgaa attcagagt gtgttggaa aaatacgtc 
      gaaggcatc gtcgatatt attttttat catgaacct 
      tataacgat agtatcaac agaggattt atttttgtg 
      gagtttgaa agccaccgt ttagctgca attgctcgc 
      agacagttg tccccagga aacttgacg atctgggga 
      aaacctatt tttgttgac tgggccgaa cctctaccg 
      gtagttaat ccgcaaatt ttaaagcag gtcacgaaa 
      ttatacctg agcaacctg ccaatgact ttgtcttct 
      gaggaattg aaaagtttt ttatgcgag ctcttggac 
      cccagccac atcatcaag gtccataaa atcaacaat 
      tttgctttt gttcatttc accctccga aagtatgcc 
      gaagaagcc ttcagaaag ctaacagga ctggttatg 
      atggacaaa ttgattggg gtcgaatgg gccagaccg 
      attgaatat agcaaacaa taccgtctg gagaaactc 
      ccggataat ttttgcaaa tcggtacct ccagctcaa 
      agaaaactg tgtcacctc gcaacgtta ctgaagact 
      gctgaagaa ctgaaaatc aaaggcctg gcggaagtg 
      tcttggcgc gacgaagat caacaaaat gccgacagc 
      aacaatgtc aacggtgtc caaacggca cttcctcag 
      gtatcgaca gtaatggac aatccgaaa aatgaagcg 
      ccttcaaac aaacgaaaa cgagggaga cctcccata 
      gacgattac gagcaagca tttacaaca ccaaagata 
      atgaacgtt acgggaaac gccgacgaa acgtattct 
      aacgatgca atgtcaacc agtgatcat gacctgtcc 
      atctgggag gaagagcca tcggcaaac gaaggagga 
      gatataacg gaacctgac gaaccacta ctaagggtg 
      aaaaaggaa acttctccg cacgatgac gacattctg 
      atagacgat tctggcgat tattcgccg aacgattca 
      aaacatgac acttcaagg acaggctcg atgaaatcg 
      ctaaacgtt acaacgtca gggacgcag tcgttcctg 
      actccggct ctggaaaag gaatggccc gacgtaatt 
      aaaatgaac gattattta aacaccgga cgacgacag 
      caattctgg gaggaaccg ttcacgaaa cgcgtaatg 
      gacgcaatc aaaaccaaa aatctcgag atgaaagtt 
      gcagcagag ctgttgggt gtctcctat gggacactc 
      tacggaaga tatcgggac tcctacggg tgtttgaaa 
      catccctat cgagtgcgc gatttctgg agcgaacaa 
      gggccgacg gatgtgttg ttgaagttg aagaaaaag 
      gagataacg ctgtacaga gcggcggag cagttgaat 
      gtgacgccg caaacgctt tcaaattac ctgatttcg 
      atgtcgcaa atcgacaac agcagcgaa gcgaacgtt 
      agcaaccag tcgaacgcg atggagtcg tacgaagag 
      gccgattcg gacgaggag ggcgacacg gtgctgccc 
      gatgtgccc tcgtcgaac aatacgagc ctcttcaaa 
      aatctcctc tcgaacgca atcaacaca tccacgtcc 
      agcaactca gtattggcc aactgtcca gacattacc 
      attatcaaa aaagagaag cacgaaggt aaagtcaat 
      aacaattct gatcattcc gacagtaat agtgaccaa 
      acaaagtaa
    • >TC001297 RB
      atggcttct gaaaaatac tcaatcatc caaagcaac 
      ggccagagg atctacaag ccggcacca tcctcagcg 
      gcgcctcca ccaaaaggt agcgagatc ttcgtgggc 
      aacatccca cgcgacctc ttcgaagac gagctcatt 
      ccactgttc tcccaagtg gcccccatt tacaagttc 
      agacttatg atggacttt actgggaac accagaggc 
      ttcgctttt gttacttat tacaacgtg tgggacgct 
      caaaaggca gttttgaaa ttcaataaa tattgcatt 
      gcgagtaac acgagaaag tcgcaatta acggtccat 
      ctttcactc gataactgt cgtctgttc tttggtaat 
      gtgcccaaa gataaaact agagatgat attgaaaat 
      gaactaaag aaatttatc gatgggatt gttaaagtg 
      attacttat ccggaacga aatgcccat cattttaat 
      cgagggttt gcttttgtg gagttccaa tcgcacgcc 
      attgcagcc attgcaaga agaaagctg ttggctgat 
      ggggtgatt agaccatgg ggaaggaag ctttacgtt 
      gattgggca gaaccggaa cccatggtc gacccagac 
      gttatgacg caggtgaaa gttttgtac atgaaaaat 
      gtgcccacc ttctggacg ttggaccgt ttaaaaacc 
      tacatctcg aaaactgtc ggcgaaata tttatcgaa 
      agaatttac aagagggat aactatgcc ttcatccac 
      tttgatgaa agatcattc gcagaaagg gctttaaaa 
      attttcgat tctgtttcc caatatctg agtttcaac 
      ggaaaacaa attgaagtg gagtgggcg cgaccgtcc 
      tgctacagc aaaaaaaat aggataaat gaggtccct 
      gataatttc tgcacctct gtgcctccc agacttcgt 
      aaactcgtt cgacaaagt aagaaagaa aataaattg 
      ggttcaact gattccagt tcttgcagc agcgagagc 
      gatattctt atgcatgcc gacttgatt gaaaccgaa 
      aacttagcg gcgcatatt gctccatca tctgtggtg 
      ggtagtgtc gataattgt gcaatgtct tcgttaaat 
      ttacggaac cacgcattt ttaaaatca ccacccatg 
      gaccatcaa gttattcaa gtcaatggc caacgcatt 
      tactccccg tgtgcatct tccggaatc cgccctccg 
      ccaaaagga acggaaatt ttcatcgga aacctcccc 
      ccggattta tacgaagac gaactcatc cccctattc 
      agccaaaaa ggccctatt tacaaccta agactcatg 
      atggacttc ttcggacgt acccgaggg tacggtttc 
      atttcgtac ttcacacaa gaagatgct catgccgct 
      gtggcagct tttaataat tataagatt agaaataag 
      ggcaagatt gctgtttca atgtcggtg gataatcgc 
      cggttgttt atcggaaat ataccaaga cacgttact 
      ttgagcgaa attcagagt gtgttggaa aaatacgtc 
      gaaggcatc gtcgatatt attttttat catgaacct 
      tataacgat agtatcaac agaggattt atttttgtg 
      gagtttgaa agccaccgt ttagctgca attgctcgc 
      agacagttg tccccagga aacttgacg atctgggga 
      aaacctatt tttgttgac tgggccgaa cctctaccg 
      gtagttaat ccgcaaatt ttaaagcag gtcacgaaa 
      ttatacctg agcaacctg ccaatgact ttgtcttct 
      gaggaattg aaaagtttt ttatgcgag ctcttggac 
      cccagccac atcatcaag gtccataaa atcaacaat 
      tttgctttt gttcatttc accctccga aagtatgcc 
      gaagaagcc ttcagaaag ctaacagga ctggttatg 
      atggacaaa ttgattggg gtcgaatgg gccagaccg 
      attgaatat agcaaacaa taccgtctg gagaaactc 
      ccggataat ttttgcaaa tcggtacct ccagctcaa 
      agaaaactg tgtcacctc gcaacgtta ctgaagact 
      gctgaagaa ctgaaaatc aaaggcctg gcggaagtg 
      tcttggcgc gacgaagat caacaaaat gccgacagc 
      aacaatgtc aacggtgtc caaacggca cttcctcag 
      gtatcgaca gtaatggac aatccgaaa aatgaagcg 
      ccttcaaac aaacgaaaa cgagggaga cctcccata 
      gacgattac gagcaagca tttacaaca ccaaagata 
      atgaacgtt acgggaaac gccgacgaa acgtattct 
      aacgatgca atgtcaacc agtgatcat gacctgtcc 
      atctgggag gaagagcca tcggcaaac gaaggagga 
      gatataacg gaacctgac gaaccacta ctaagggtg 
      aaaaaggaa acttctccg cacgatgac gacattctg 
      atagacgat tctggcgat tattcgccg aacgattca 
      aaacatgac acttcaagg acaggctcg atgaaatcg 
      ctaaacgtt acaacgtca gggacgcag tcgttcctg 
      actccggct ctggaaaag gaatggccc gacgtaatt 
      aaaatgaac gattattta aacaccgga cgacgacag 
      caattctgg gaggaaccg ttcacgaaa cgcgtaatg 
      gacgcaatc aaaaccaaa aatctcgag atgaaagtt 
      gcagcagag ctgttgggt gtctcctat gggacactc 
      tacggaaga tatcgggac tcctacggg tgtttgaaa 
      catccctat cgaacgagc aatgcgtcc gaagggagt 
      agtagcgta cccgagagc ggcaatgaa gtgcgcgat 
      ttctggagc gaacaaggg ccgacggat gtgttgttg 
      aagttgaag aaaaaggag ataacgctg tacagagcg 
      gcggagcag ttgaatgtg acgccgcaa acgctttca 
      aattacctg atttcgatg tcgcaaatc gacaacagc 
      agcgaagcg aacgttagc aaccagtcg aacgcgatg 
      gagtcgtac gaagaggcc gattcggac gaggagggc 
      gacacggtg ctgcccgat gtgccctcg tcgaacaat 
      acgagcctc ttcaaaaat ctcctctcg aacgcaatc 
      aacacatcc acgtccagc aactcagta ttggccaac 
      tgtccagac attaccatt atcaaaaaa gagaagcac 
      gaaggtaaa gtcaataac aattctgat cattccgac 
      agtaatagt gaccaaaca aagtaa
    mRNA sequence
    • >TC001297 RA
      tgttgaaca agaaacaaa gaatggctt ctgaaaaat 
      actcaatca tccaaagca acggccaga ggatctaca 
      agccggcac catcctcag cggcgcctc caccaaaag 
      gtagcgaga tcttcgtgg gcaacatcc cacgcgacc 
      tcttcgaag acgagctca ttccactgt tctcccaag 
      tggccccca tttacaagt tcagactta tgatggact 
      ttactggga acaccagag gcttcgctt ttgttactt 
      attacaacg tgtgggacg ctcaaaagg cagttttga 
      aattcaata aatattgca ttgcgagta acacgagaa 
      agtcgcaat taacggtcc atctttcac tcgataact 
      gtcgtctgt tctttggta atgtgccca aagataaaa 
      ctagagatg atattgaaa atgaactaa agaaattta 
      tcgatggga ttgttaaag tgattactt atccggaac 
      gaaatgccc atcatttta atcgagggt ttgcttttg 
      tggagttcc aatcgcacg ccattgcag ccattgcaa 
      gaagaaagc tgttggctg atggggtga ttagaccat 
      ggggaagga agctttacg ttgattggg cagaaccgg 
      aacccatgg tcgacccag acgttatga cgcaggtga 
      aagttttgt acatgaaaa atgtgccca ccttctgga 
      cgttggacc gtttaaaaa cctacatct cgaaaactg 
      tcggcgaaa tatttatcg aaagaattt acaagaggg 
      ataactatg ccttcatcc actttgatg aaagatcat 
      tcgcagaaa gggctttaa aaattttcg attctgttt 
      cccaatatc tgagtttca acggaaaac aaattgaag 
      tggagtggg cgcgaccgt cctgctaca gcaaaaaaa 
      ataggataa atgaggtcc ctgataatt tctgcacct 
      ctgtgcctc ccagacttc gtaaactcg ttcgacaaa 
      gtaagaaag aaaataaat tgggttcaa ctgattcca 
      gttcttgca gcagcgaga gcgatattc ttatgcatg 
      ccgacttga ttgaaaccg aaaacttag cggcgcata 
      ttgctccat catctgtgg tgggtagtg tcgataatt 
      gtgcaatgt cttcgttaa atttacgga accacgcat 
      ttttaaaat caccaccca tggaccatc aagttattc 
      aagtcaatg gccaacgca tttactccc cgtgtgcat 
      cttccggaa tccgccctc cgccaaaag gaacggaaa 
      ttttcatcg gaaacctcc ccccggatt tatacgaag 
      acgaactca tccccctat tcagccaaa aaggcccta 
      tttacaacc taagactca tgatggact tcttcggac 
      gtacccgag ggtacggtt tcatttcgt acttcacac 
      aagaagatg ctcatgccg ctgtggcag cttttaata 
      attataaga ttagaaata agggcaaga ttgctgttt 
      caatgtcgg tggataatc gccggttgt ttatcggaa 
      atataccaa gacacgtta ctttgagcg aaattcaga 
      gtgtgttgg aaaaatacg tcgaaggca tcgtcgata 
      ttatttttt atcatgaac cttataacg atagtatca 
      acagaggat ttatttttg tggagtttg aaagccacc 
      gtttagctg caattgctc gcagacagt tgtccccag 
      gaaacttga cgatctggg gaaaaccta tttttgttg 
      actgggccg aacctctac cggtagtta atccgcaaa 
      ttttaaagc aggtcacga aattatacc tgagcaacc 
      tgccaatga ctttgtctt ctgaggaat tgaaaagtt 
      ttttatgcg agctcttgg accccagcc acatcatca 
      aggtccata aaatcaaca attttgctt ttgttcatt 
      tcaccctcc gaaagtatg ccgaagaag ccttcagaa 
      agctaacag gactggtta tgatggaca aattgattg 
      gggtcgaat gggccagac cgattgaat atagcaaac 
      aataccgtc tggagaaac tcccggata atttttgca 
      aatcggtac ctccagctc aaagaaaac tgtgtcacc 
      tcgcaacgt tactgaaga ctgctgaag aactgaaaa 
      tcaaaggcc tggcggaag tgtcttggc gcgacgaag 
      atcaacaaa atgccgaca gcaacaatg tcaacggtg 
      tccaaacgg cacttcctc aggtatcga cagtaatgg 
      acaatccga aaaatgaag cgccttcaa acaaacgaa 
      aacgaggga gacctccca tagacgatt acgagcaag 
      catttacaa caccaaaga taatgaacg ttacgggaa 
      acgccgacg aaacgtatt ctaacgatg caatgtcaa 
      ccagtgatc atgacctgt ccatctggg aggaagagc 
      catcggcaa acgaaggag gagatataa cggaacctg 
      acgaaccac tactaaggg tgaaaaagg aaacttctc 
      cgcacgatg acgacattc tgatagacg attctggcg 
      attattcgc cgaacgatt caaaacatg acacttcaa 
      ggacaggct cgatgaaat cgctaaacg ttacaacgt 
      cagggacgc agtcgttcc tgactccgg ctctggaaa 
      aggaatggc ccgacgtaa ttaaaatga acgattatt 
      taaacaccg gacgacgac agcaattct gggaggaac 
      cgttcacga aacgcgtaa tggacgcaa tcaaaacca 
      aaaatctcg agatgaaag ttgcagcag agctgttgg 
      gtgtctcct atgggacac tctacggaa gatatcggg 
      actcctacg ggtgtttga aacatccct atcgagtgc 
      gcgatttct ggagcgaac aagggccga cggatgtgt 
      tgttgaagt tgaagaaaa aggagataa cgctgtaca 
      gagcggcgg agcagttga atgtgacgc cgcaaacgc 
      tttcaaatt acctgattt cgatgtcgc aaatcgaca 
      acagcagcg aagcgaacg ttagcaacc agtcgaacg 
      cgatggagt cgtacgaag aggccgatt cggacgagg 
      agggcgaca cggtgctgc ccgatgtgc cctcgtcga 
      acaatacga gcctcttca aaaatctcc tctcgaacg 
      caatcaaca catccacgt ccagcaact cagtattgg 
      ccaactgtc cagacatta ccattatca aaaaagaga 
      agcacgaag gtaaagtca ataacaatt ctgatcatt 
      ccgacagta atagtgacc aaacaaagt aatcgacga 
      cgctatatg tatgtaaac atttccact attagtatt 
      ttatacaga ccaaagtaa ttttgtact gttttttct 
      cttagttga tttagtttt agtgtaaat gaatcttgt 
      gtttgctga aaacgtagt agtgatatg ggaaatacc 
      aaaatgtct gttacaaag taaagtgta tatttacat 
      ttaccgcaa tatacctat attgtattg gcaaggtag 
      tttagtctt aggaacata tcacggagt ccgctgctg 
      gacagtctg ctgcactga ctctacgtt gcaatccta 
      tttatagtg ctttaatct gtaggttta tcagcaatg 
      tatctgctc cactctcag tatttgtat tttgtgtgc 
      attattgtt tctggtagg taaacccgt aggattagg 
      acgaggaca tacgatact ttggctatt attatttat 
      gtacctatg tattaactg tatgtagtc ttgcatcat 
      agattagga tttgtcata tatttatat aaaacatgg 
      agagtaaag gttcatgtt ttcctatta agacatacc 
      tatactatt atagtaata ataacatat ataatgaac 
      tatatttat acaattatt tgttgagtg cctaatcat 
      aagttaaca taggactta actttaagt ttaattttt 
      atgtatttc gatgcttat tcattttca tgatctgtt 
      ttccattac atatcctct tggttttag gttcggaaa 
      ttattttct aatattttg ttgcttggt acaacttat 
      tatgattta cctttttgg gtcggttag aatttttcc 
      gagtacctc gtaatattt atatgttct ttatgtgtt 
      tgtacattt tatgtagtt ttttattta ttaaagatt 
      ttttataga a
    • >TC001297 RB
      tgttgaaca agaaacaaa gaatggctt ctgaaaaat 
      actcaatca tccaaagca acggccaga ggatctaca 
      agccggcac catcctcag cggcgcctc caccaaaag 
      gtagcgaga tcttcgtgg gcaacatcc cacgcgacc 
      tcttcgaag acgagctca ttccactgt tctcccaag 
      tggccccca tttacaagt tcagactta tgatggact 
      ttactggga acaccagag gcttcgctt ttgttactt 
      attacaacg tgtgggacg ctcaaaagg cagttttga 
      aattcaata aatattgca ttgcgagta acacgagaa 
      agtcgcaat taacggtcc atctttcac tcgataact 
      gtcgtctgt tctttggta atgtgccca aagataaaa 
      ctagagatg atattgaaa atgaactaa agaaattta 
      tcgatggga ttgttaaag tgattactt atccggaac 
      gaaatgccc atcatttta atcgagggt ttgcttttg 
      tggagttcc aatcgcacg ccattgcag ccattgcaa 
      gaagaaagc tgttggctg atggggtga ttagaccat 
      ggggaagga agctttacg ttgattggg cagaaccgg 
      aacccatgg tcgacccag acgttatga cgcaggtga 
      aagttttgt acatgaaaa atgtgccca ccttctgga 
      cgttggacc gtttaaaaa cctacatct cgaaaactg 
      tcggcgaaa tatttatcg aaagaattt acaagaggg 
      ataactatg ccttcatcc actttgatg aaagatcat 
      tcgcagaaa gggctttaa aaattttcg attctgttt 
      cccaatatc tgagtttca acggaaaac aaattgaag 
      tggagtggg cgcgaccgt cctgctaca gcaaaaaaa 
      ataggataa atgaggtcc ctgataatt tctgcacct 
      ctgtgcctc ccagacttc gtaaactcg ttcgacaaa 
      gtaagaaag aaaataaat tgggttcaa ctgattcca 
      gttcttgca gcagcgaga gcgatattc ttatgcatg 
      ccgacttga ttgaaaccg aaaacttag cggcgcata 
      ttgctccat catctgtgg tgggtagtg tcgataatt 
      gtgcaatgt cttcgttaa atttacgga accacgcat 
      ttttaaaat caccaccca tggaccatc aagttattc 
      aagtcaatg gccaacgca tttactccc cgtgtgcat 
      cttccggaa tccgccctc cgccaaaag gaacggaaa 
      ttttcatcg gaaacctcc ccccggatt tatacgaag 
      acgaactca tccccctat tcagccaaa aaggcccta 
      tttacaacc taagactca tgatggact tcttcggac 
      gtacccgag ggtacggtt tcatttcgt acttcacac 
      aagaagatg ctcatgccg ctgtggcag cttttaata 
      attataaga ttagaaata agggcaaga ttgctgttt 
      caatgtcgg tggataatc gccggttgt ttatcggaa 
      atataccaa gacacgtta ctttgagcg aaattcaga 
      gtgtgttgg aaaaatacg tcgaaggca tcgtcgata 
      ttatttttt atcatgaac cttataacg atagtatca 
      acagaggat ttatttttg tggagtttg aaagccacc 
      gtttagctg caattgctc gcagacagt tgtccccag 
      gaaacttga cgatctggg gaaaaccta tttttgttg 
      actgggccg aacctctac cggtagtta atccgcaaa 
      ttttaaagc aggtcacga aattatacc tgagcaacc 
      tgccaatga ctttgtctt ctgaggaat tgaaaagtt 
      ttttatgcg agctcttgg accccagcc acatcatca 
      aggtccata aaatcaaca attttgctt ttgttcatt 
      tcaccctcc gaaagtatg ccgaagaag ccttcagaa 
      agctaacag gactggtta tgatggaca aattgattg 
      gggtcgaat gggccagac cgattgaat atagcaaac 
      aataccgtc tggagaaac tcccggata atttttgca 
      aatcggtac ctccagctc aaagaaaac tgtgtcacc 
      tcgcaacgt tactgaaga ctgctgaag aactgaaaa 
      tcaaaggcc tggcggaag tgtcttggc gcgacgaag 
      atcaacaaa atgccgaca gcaacaatg tcaacggtg 
      tccaaacgg cacttcctc aggtatcga cagtaatgg 
      acaatccga aaaatgaag cgccttcaa acaaacgaa 
      aacgaggga gacctccca tagacgatt acgagcaag 
      catttacaa caccaaaga taatgaacg ttacgggaa 
      acgccgacg aaacgtatt ctaacgatg caatgtcaa 
      ccagtgatc atgacctgt ccatctggg aggaagagc 
      catcggcaa acgaaggag gagatataa cggaacctg 
      acgaaccac tactaaggg tgaaaaagg aaacttctc 
      cgcacgatg acgacattc tgatagacg attctggcg 
      attattcgc cgaacgatt caaaacatg acacttcaa 
      ggacaggct cgatgaaat cgctaaacg ttacaacgt 
      cagggacgc agtcgttcc tgactccgg ctctggaaa 
      aggaatggc ccgacgtaa ttaaaatga acgattatt 
      taaacaccg gacgacgac agcaattct gggaggaac 
      cgttcacga aacgcgtaa tggacgcaa tcaaaacca 
      aaaatctcg agatgaaag ttgcagcag agctgttgg 
      gtgtctcct atgggacac tctacggaa gatatcggg 
      actcctacg ggtgtttga aacatccct atcgaacga 
      gcaatgcgt ccgaaggga gtagtagcg tacccgaga 
      gcggcaatg aagtgcgcg atttctgga gcgaacaag 
      ggccgacgg atgtgttgt tgaagttga agaaaaagg 
      agataacgc tgtacagag cggcggagc agttgaatg 
      tgacgccgc aaacgcttt caaattacc tgatttcga 
      tgtcgcaaa tcgacaaca gcagcgaag cgaacgtta 
      gcaaccagt cgaacgcga tggagtcgt acgaagagg 
      ccgattcgg acgaggagg gcgacacgg tgctgcccg 
      atgtgccct cgtcgaaca atacgagcc tcttcaaaa 
      atctcctct cgaacgcaa tcaacacat ccacgtcca 
      gcaactcag tattggcca actgtccag acattacca 
      ttatcaaaa aagagaagc acgaaggta aagtcaata 
      acaattctg atcattccg acagtaata gtgaccaaa 
      caaagtaat cgacgacgc tatatgtat gtaaacatt 
      tccactatt agtatttta tacagacca aagtaattt 
      tgtactgtt ttttctctt agttgattt agttttagt 
      gtaaatgaa tcttgtgtt tgctgaaaa cgtagtagt 
      gatatggga aataccaaa atgtctgtt acaaagtaa 
      agtgtatat ttacattta ccgcaatat acctatatt 
      gtattggca aggtagttt agtcttagg aacatatca 
      cggagtccg ctgctggac agtctgctg cactgactc 
      tacgttgca atcctattt atagtgctt taatctgta 
      ggtttatca gcaatgtat ctgctccac tctcagtat 
      ttgtatttt gtgtgcatt attgtttct ggtaggtaa 
      acccgtagg attaggacg aggacatac gatactttg 
      gctattatt atttatgta cctatgtat taactgtat 
      gtagtcttg catcataga ttaggattt gtcatatat 
      ttatataaa acatggaga gtaaaggtt catgttttc 
      ctattaaga catacctat actattata gtaataata 
      acatatata atgaactat atttataca attatttgt 
      tgagtgcct aatcataag ttaacatag gacttaact 
      ttaagttta atttttatg tatttcgat gcttattca 
      ttttcatga tctgttttc cattacata tcctcttgg 
      ttttaggtt cggaaatta ttttctaat attttgttg 
      cttggtaca acttattat gatttacct ttttgggtc 
      ggttagaat ttttccgag tacctcgta atatttata 
      tgttcttta tgtgtttgt acattttat gtagttttt 
      tatttatta aagattttt tatagaa
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY