Status
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Gene information
General information
TC010870 Gene

The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser.

NC_007416.3: 5073609..5080204
Sequence information
Transcripts / Proteins (2) Get mRNA sequence
Get CDS sequence
Get protein sequence
Ortholog information (from OrthoDB)

The information about the homolog genes in Drosophila is provided by OrthoDB http://www.orthodb.org/. The homologs are sorted according to their similarity score. For an orthology statement additional analysis are required.
The data basis for the orthologs is OrthoDB v9 containing OGS3 for Tribolium castaneum and 2015_04 (r6.07) for Drosophila melanogaster.

Closest fly homologs
    TC010870
    Gene ontology

    GO terms for Tribolium

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    There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.


    GO terms for the homologous Drosophila genes


    Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.


    Gene
    {{ goGene }}
    The Tribolium gene the GO term is assigned to.
    GO ID *
    {{ blurIdResult }}
    The ID of the GO term you assign to the gene. Please enter only the ID of the GO term with proceeding 'GO:'. This information is mandatory.
    Evidence
    {{ blurEvidenceResult }}
    The evidence code describes with which method the function or location, expressed by the GO term, was show for this gene. Please refer to this page for a definition of the evidence code and a decision tree.
    Reference *
    {{ blurReferenceResult }}
    The reference where the function or location is described for the gene. Please enter a PubMed ID. This information is mandatory.
    Quotation
    If you paste here the relevant section of the reference it is for us a great help to review your annotation. The quotation may be also be displayed to the users of iBeetle-Base.
    Name
    You may enter your name. The contact information can help us to clarify any questions. If you agree, we may show your name on this page to honor your contribution.
    Email
    We will use your email address only for possible questions regarding this annotation. We will never show your address or give it away.
    Publish name
    If you have entered your name and agree by marking the checkbox. we might show your name on this page to honor your contribution.

    * : mandatory fields
    For help on how to submit larger datasets or non experimental data please contact us.
    iBeetle screen iB_01754

    Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.

    iB sequence
    Phenotype after pupal injection
    Usually 10 injected animals

    Pupal injection procedure

    Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.

    3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.

    9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.

    11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.

    Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.

    13 dpi: Egg productivity and Ovary analysis
    The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi). In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.

    14 dpi: Analysis of embryonic musculature and early embryonic development
    Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.

    15 dpi: Analysis of larval instar 1 cuticle
    Offspring of injected females were analysed and cuticle phenotypes were annotated.

    22 dpi: Stink gland analysis
    Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.

    Terms used in the pupal injection procedure

    larval pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    empty eggs
    Just empty shells are visible, no cuticle has been developed.
    strong defects
    L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
    strongly fragmented (cuticle crumbs)
    No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
    cuticle remnants (with unidentifiable segments)
    Segments or parts of appendages are recognizable, but identity is not clear.
    cuticle remnants (with some identifiable segments)
    At least one segment or appendage is clearly regonizable.
    number of eggs on slide
    affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
    For the embryonic muscle analysis the hatched as well as the not hatched were analysed.
    total number of affected eggs/embryos/larvae
    Summary of all different phenotypes/ phenotypic series which were annotated.
    inside-out
    The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    Please see the help page for more information
    Metamorphosis and survival

    Lethality 11 days after pupal injection: 10.0% (includes death as pupa, adult)

    eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 1 (3 dpi)
    Days post injection


    Analysis of embryonic musculature and early development
    number of eggs/embryos/larvae on slide: > 50 embryo/egg not developed/not fertilized - Penetrance (percentage of animals/eggs on slide): more than 80%

    embryo/egg with embryonic tissue, no cuticle, but muscle fluorescence - Penetrance (percentage of animals/eggs on slide): less than 30%

    affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): more than 80%
    Analysis of larval stage 1 cuticle
    number of eggs/embryos/larvae on slide: > 50
    egg without cuticle embryo/egg without visible larval cuticle in cuticle preparation - Penetrance (percentage of animals/eggs on slide): more than 80%

    affected eggs/embryos/larvae total percentage of affected eggs/embryos/larvae on slide - Penetrance (percentage of animals/eggs on slide): more than 80%
    Phenotype after larval injection
    Usually 10 injected animals

    Larval injection procedure

    Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.

    11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.

    16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.

    19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.

    22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.

    41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).

    Terms used in the larval injection procedure

    pupal/ adult pantagmatic defects
    At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
    pupal molt not fulfilled
    The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
    eclosion not fulfilled
    The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
    starved
    Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
    Metamorphosis and survival

    Lethalities 11 days after larval injection: 30.0% (includes death as larva, prepupa, pupa)
    Lethalities 22 days after larval injection: 50.0% (includes death as larva, prepupa, pupa, adult)

    larva lethality - Number of animals showing the phenotype: 3 (11 dpi)
    Days post injection


    adult lethality immediately after eclosion - Number of animals showing the phenotype: 1 (16 dpi)
    Days post injection


    eclosion delayed (still pupa) - Number of animals showing the phenotype: 1 (16 dpi)
    Days post injection


    adult lethality - Number of animals showing the phenotype: 1 (22 dpi)
    Days post injection


    Fertility
    egg production: number <50% of expected -
    Comment: No phenotype present!
    RNAi sequence
    Primers
    Left: Right:
    Protein sequence
    • >TC010870 RA
      MASVSYQIA NLLEKMQSS DKDFRFMAT NDLMAELQK 
      DSIKLDDDS ERKVVRMLL KLLEDKNGE VQNLAVKCL 
      GPLVNKVKE FQVETIVEA LCTNMVSDK EQLRDISSI 
      GLKTVIAEL PQAPGGLSG NICKRITGR LTTAIERQD 
      DVSVQLEAL DIVTDLLYR FGNVLQSYH ASILNALLP 
      QLCSQRQAV RKRTIAACS NLVLSCNNA LYDKLIEHL 
      YNGMRTDNK NSQIRTYVQ CIAAVCRQS GHKFGEHIE 
      KFVPLIQMW SAVEDDETR EFCLQAFES FINRCPKEI 
      TPKISAITD LCLNYMTHD PNYNYDEDG DDRAMGAYD 
      DEEEEENDE YSDDDDMSW KVRRAAAKC LESIICTRH 
      ELLSEFYKV LSPVLISRF KEREENVKS DIFRAYIAL 
      LRQTKSTVN VNIDPNSME QEEMPIYLL QQQVPMIVK 
      GVQSQMKEK STKTRQDCF QLLKELCNV LPGALTHHI 
      GDLIPGILF SLSEKNGSS NMKIDGLSF LLCLLASHP 
      PEVFHPHIN ILLPHIIAN VGDNFYKIT AEALNVLKE 
      LVKVIRPLD RDSNFDFTP FVKEIYLCT LSRLKTSDL 
      DQEVKEKAI STMGQIICN LGDHLGSEL SCCLPLFLD 
      RLRNEITRL TTVKALTKI AGSPLGIEL PILDEAVPV 
      LGLFLRKNQ RALKLSTLQ LIDCLIKNY HVYMYVELL 
      QHVIVEVPP LLDESDLHI AQYTLVILK SIAEYHPLA 
      LQDLPTNIF PQILVLVKS PLLQGSALN SMLEFFKTL 
      VQCNLPGLS YNDLLQFLV HPISISQGS GAGDAVIHK 
      QAYYSLAKC VAAITVTMQ HQALQIVPQ FINEIRSSR 
      HDAQKIFTL LVVGEIGRE IDLTGFANL EQIISEAFF 
      AVSEEVKSA ASYALGSIA IGNLQQYLP FILTEDENE 
      PRRQYLLLH SLKEVIACL SSTPEGIQQ LLPFVPAIW 
      DTLYRHCES EEEGTRNVV SECLGKLTL IDPNHLLPK 
      LKESLGSES SLMRTTIVT AIKFTISDQ PASIDALLR 
      QCIGEFLNT LEDPDLNVR RVALVAFNS AAHNKPSLI 
      RDLLDTILP RLYHETNIK RELIREVEM GPFKHTVDD 
      GLDLRKAAF ECMYTLLDS CLDRIDIFE FINHVELGL 
      KDHYDIKML TYLMVSRLA QICPGAVLQ SLDRLVEPL 
      KATCTMKVK ANSVKQEYE KQDELKRSA LRAVVSLLS 
      IPDADKNQH LNEFVTQIK TSPDLAQIF DSIQKDSAN 
      NINDFFLMD QS
    • >TC010870 RB
      MAEEQQQGD ESNPYEQGD HAFELDDLE RALVTCELR 
      SYVDQVVED AAEMASVSY QIANLLEKM QSSDKDFRF 
      MATNDLMAE LQKDSIKLD DDSERKVVR MLLKLLEDK 
      NGEVQNLAV KCLGPLVNK VKEFQVETI VEALCTNMV 
      SDKEQLRDI SSIGLKTVI AELPQAPGG LSGNICKRI 
      TGRLTTAIE RQDDVSVQL EALDIVTDL LYRFGNVLQ 
      SYHASILNA LLPQLCSQR QAVRKRTIA ACSNLVLSC 
      NNALYDKLI EHLYNGMRT DNKNSQIRT YVQCIAAVC 
      RQSGHKFGE HIEKFVPLI QMWSAVEDD ETREFCLQA 
      FESFINRCP KEITPKISA ITDLCLNYM THDPNYNYD 
      EDGDDRAMG AYDDEEEEE NDEYSDDDD MSWKVRRAA 
      AKCLESIIC TRHELLSEF YKVLSPVLI SRFKEREEN 
      VKSDIFRAY IALLRQTKS TVNVNIDPN SMEQEEMPI 
      YLLQQQVPM IVKGVQSQM KEKSTKTRQ DCFQLLKEL 
      CNVLPGALT HHIGDLIPG ILFSLSEKN GSSNMKIDG 
      LSFLLCLLA SHPPEVFHP HINILLPHI IANVGDNFY 
      KITAEALNV LKELVKVIR PLDRDSNFD FTPFVKEIY 
      LCTLSRLKT SDLDQEVKE KAISTMGQI ICNLGDHLG 
      SELSCCLPL FLDRLRNEI TRLTTVKAL TKIAGSPLG 
      IELPILDEA VPVLGLFLR KNQRALKLS TLQLIDCLI 
      KNYHVYMYV ELLQHVIVE VPPLLDESD LHIAQYTLV 
      ILKSIAEYH PLALQDLPT NIFPQILVL VKSPLLQGS 
      ALNSMLEFF KTLVQCNLP GLSYNDLLQ FLVHPISIS 
      QGSGAGDAV IHKQAYYSL AKCVAAITV TMQHQALQI 
      VPQFINEIR SSRHDAQKI FTLLVVGEI GREIDLTGF 
      ANLEQIISE AFFAVSEEV KSAASYALG SIAIGNLQQ 
      YLPFILTED ENEPRRQYL LLHSLKEVI ACLSSTPEG 
      IQQLLPFVP AIWDTLYRH CESEEEGTR NVVSECLGK 
      LTLIDPNHL LPKLKESLG SESSLMRTT IVTAIKFTI 
      SDQPASIDA LLRQCIGEF LNTLEDPDL NVRRVALVA 
      FNSAAHNKP SLIRDLLDT ILPRLYHET NIKRELIRE 
      VEMGPFKHT VDDGLDLRK AAFECMYTL LDSCLDRID 
      IFEFINHVE LGLKDHYDI KMLTYLMVS RLAQICPGA 
      VLQSLDRLV EPLKATCTM KVKANSVKQ EYEKQDELK 
      RSALRAVVS LLSIPDADK NQHLNEFVT QIKTSPDLA 
      QIFDSIQKD SANNINDFF LMDQS
    CDS sequence
    • >TC010870 RA
      atggctagt gtctcttac cagattgcc aatcttctt 
      gagaagatg caatcatct gacaaagat tttcgattt 
      atggccaca aacgattta atggccgaa ctgcagaaa 
      gatagtatc aaattagat gatgattcg gaacgaaag 
      gttgtaaga atgttgttg aaactactt gaagataaa 
      aacggtgaa gtacaaaac ttggctgtc aaatgtctg 
      gggccttta gttaacaaa gttaaggaa ttccaagtg 
      gagaccatt gttgaggcc ttgtgcacc aacatggtc 
      tccgacaag gagcaactg cgggatatt tccagcatt 
      gggctcaag acggttatc gctgaactg ccacaggca 
      cctgggggc ctctccgga aacatttgc aagcggatc 
      accggtcgt ttgacgact gctatcgaa aggcaagac 
      gacgtgtcc gtgcaactg gaagctctc gacattgtc 
      acggatttg ttataccgc tttggcaac gttttgcaa 
      tcctaccat gcctccata ttaaacgcc ctcttacct 
      cagttatgc tcacaacgg caagcagtc cgcaaacgt 
      acgattgca gcttgcagt aacttagtt ctctcgtgc 
      aacaatgca ttgtacgat aaactaatc gagcatctg 
      tacaacggg atgagaact gataacaag aactcccaa 
      attcgcacc tacgtgcag tgcattgca gccgtgtgc 
      cgacaatcg ggccacaag ttcggcgaa catattgaa 
      aagttcgta cctttgatc caaatgtgg agcgctgtg 
      gaagacgac gagaccaga gagttttgt ttacaagct 
      tttgagagt tttatcaat cgttgtccc aaagaaatc 
      accccgaaa atcagcgcc atcacagac ttgtgccta 
      aattacatg actcatgac ccgaattac aactacgac 
      gaagatggg gatgatcga gccatgggg gcttacgat 
      gacgaggaa gaagaggag aatgacgag tacagcgat 
      gacgatgac atgagctgg aaagtgaga cgtgcagct 
      gccaagtgc ttggagtcg atcatctgc actcgccat 
      gaattattg tctgaattt tacaaggtt ttgtcgcct 
      gtgttaatc tcccggttt aaagagcgg gaagagaac 
      gtgaaatca gatattttc cgtgcttac atcgcgctt 
      ttgagacaa acaaaatcg actgttaac gtgaatatc 
      gatccgaac tccatggag caggaggag atgcccatt 
      tacttgctc cagcagcaa gttccaatg attgtgaaa 
      ggcgtgcag tcgcaaatg aaggaaaag agcacgaag 
      acgcgccaa gactgcttc cagctccta aaagaatta 
      tgcaatgtc ctaccgggc gctttaacg caccacatt 
      ggtgatctg attcccggt attctattt tcactgagt 
      gaaaaaaat gggagcagt aacatgaaa attgacggc 
      ttgtcgttt ctcctgtgt cttttggca tcgcaccct 
      cctgaagtt tttcatccc catatcaat atcctccta 
      ccgcacatc atagctaac gtgggtgat aacttttat 
      aaaatcaca gctgaagct ttgaacgtt ctgaaagag 
      ctggtcaag gtcattcgt cctctggac cgcgactcg 
      aacttcgat ttcacgccc tttgtgaag gaaatctac 
      ctctgtact ttatcgcgt ttaaagacg tccgattta 
      gatcaagag gtcaaggaa aaagctatc tcgaccatg 
      gggcaaatt atttgcaac ctgggtgat cacctaggg 
      agtgaattg tcctgctgt cttcctttg ttcctcgat 
      agattacgt aacgaaatc acgaggttg actacagtt 
      aaagcgttg accaaaatt gcgggctct ccattgggc 
      atcgaacta ccgattttg gacgaagca gtgccggtt 
      ttggggctc ttcctgcgt aaaaaccag cgtgcttta 
      aaactaagt actttgcaa ctcattgat tgtttaata 
      aagaattac cacgtctac atgtacgtg gaattactc 
      caacatgta atagtagaa gtgccacca ctccttgac 
      gagtccgac ctgcacata gcccagtac actttggtg 
      atcttgaag tcgattgcg gaataccac cccctggct 
      ttgcaagac ctgccaaca aacatcttc ccgcaaatc 
      ttggtcttg gtgaagtcg cctcttctg caaggttcc 
      gccctgaat tccatgctg gaattcttc aaaactcta 
      gtccaatgc aaccttccg ggattgtcc tacaacgac 
      ttgttgcaa tttctcgtt cacccgatc agcattagc 
      cagggttct ggggccggt gacgccgtc atccacaag 
      caagcctat tactcgttg gccaaatgc gtggctgct 
      ataacagtg acgatgcaa caccaagcg ttgcaaatc 
      gtcccccaa ttcatcaac gaaattcgc tcttcgcgc 
      cacgacgcc cagaagatc ttcactttg ctcgtggtc 
      ggcgaaatc gggcgcgaa atcgatttg accggattt 
      gccaacttg gagcaaatc atctccgag gcgtttttc 
      gccgtgtct gaggaagtc aagtccgct gcgagctac 
      gctttgggc agcattgcc atcgggaac ttgcagcaa 
      tatcttccg tttatcctg accgaggat gagaacgag 
      ccccgaaga cagtacttg ttgcttcac tctttgaag 
      gaagtcatc gcgtgtctg tcttcaaca ccggagggc 
      atccagcaa ttactgcct ttcgtgccc gcgatttgg 
      gacactttg taccgccac tgcgagagt gaggaggaa 
      gggacaagg aacgtagtt tcggaatgt ttgggcaaa 
      ttgactctg attgacccg aaccatttg ctgccgaag 
      ttgaaggaa tcgctgggc tccgagtcc tcgctcatg 
      cgcacgacg atagtgacg gcgatcaag tttacgatt 
      tctgaccag cctgcttca attgacgca ttgttgcgg 
      caatgcatt ggcgaattt ttgaatact ttggaggat 
      cccgacttg aatgtgaga cgagtggcg cttgtggct 
      ttcaactcg gctgctcac aacaagccc tcgctgatc 
      cgtgatttg cttgacacg attttgccc cgtctatac 
      cacgagact aacattaag cgagaacta atccgtgaa 
      gttgagatg ggcccattc aagcatacc gttgatgac 
      ggcttggac ctgcgcaag gcagcgttc gagtgcatg 
      tacaccttg cttgattct tgtttggac agaatcgat 
      attttcgaa tttatcaat cacgttgaa cttggcctt 
      aaagaccat tacgatatt aaaatgtta acttattta 
      atggtgtcg cgactagct caaatatgc cccggcgcc 
      gtattgcaa agcttagat agactggtc gagcccttg 
      aaggcaact tgtaccatg aaagttaaa gcaaattcg 
      gttaaacag gaatacgag aaacaggat gaacttaag 
      agaagtgcc cttcgggct gttgtttct cttttaagc 
      attcctgat gccgataaa aatcaacac ttgaacgaa 
      tttgtcacc caaatcaag acttctccc gacctagcc 
      cagattttc gactcgatc cagaaagat tccgctaat 
      aatattaac gatttcttt ttgatggat cagagttag
    • >TC010870 RB
      atggccgaa gaacaacaa cagggtgat gaaagtaac 
      ccttacgag caaggtgat catgctttt gagctagat 
      gatcttgaa cgtgctttg gtaacatgc gaacttcgc 
      agttacgtt gatcaagta gtagaagac gctgcagag 
      atggctagt gtctcttac cagattgcc aatcttctt 
      gagaagatg caatcatct gacaaagat tttcgattt 
      atggccaca aacgattta atggccgaa ctgcagaaa 
      gatagtatc aaattagat gatgattcg gaacgaaag 
      gttgtaaga atgttgttg aaactactt gaagataaa 
      aacggtgaa gtacaaaac ttggctgtc aaatgtctg 
      gggccttta gttaacaaa gttaaggaa ttccaagtg 
      gagaccatt gttgaggcc ttgtgcacc aacatggtc 
      tccgacaag gagcaactg cgggatatt tccagcatt 
      gggctcaag acggttatc gctgaactg ccacaggca 
      cctgggggc ctctccgga aacatttgc aagcggatc 
      accggtcgt ttgacgact gctatcgaa aggcaagac 
      gacgtgtcc gtgcaactg gaagctctc gacattgtc 
      acggatttg ttataccgc tttggcaac gttttgcaa 
      tcctaccat gcctccata ttaaacgcc ctcttacct 
      cagttatgc tcacaacgg caagcagtc cgcaaacgt 
      acgattgca gcttgcagt aacttagtt ctctcgtgc 
      aacaatgca ttgtacgat aaactaatc gagcatctg 
      tacaacggg atgagaact gataacaag aactcccaa 
      attcgcacc tacgtgcag tgcattgca gccgtgtgc 
      cgacaatcg ggccacaag ttcggcgaa catattgaa 
      aagttcgta cctttgatc caaatgtgg agcgctgtg 
      gaagacgac gagaccaga gagttttgt ttacaagct 
      tttgagagt tttatcaat cgttgtccc aaagaaatc 
      accccgaaa atcagcgcc atcacagac ttgtgccta 
      aattacatg actcatgac ccgaattac aactacgac 
      gaagatggg gatgatcga gccatgggg gcttacgat 
      gacgaggaa gaagaggag aatgacgag tacagcgat 
      gacgatgac atgagctgg aaagtgaga cgtgcagct 
      gccaagtgc ttggagtcg atcatctgc actcgccat 
      gaattattg tctgaattt tacaaggtt ttgtcgcct 
      gtgttaatc tcccggttt aaagagcgg gaagagaac 
      gtgaaatca gatattttc cgtgcttac atcgcgctt 
      ttgagacaa acaaaatcg actgttaac gtgaatatc 
      gatccgaac tccatggag caggaggag atgcccatt 
      tacttgctc cagcagcaa gttccaatg attgtgaaa 
      ggcgtgcag tcgcaaatg aaggaaaag agcacgaag 
      acgcgccaa gactgcttc cagctccta aaagaatta 
      tgcaatgtc ctaccgggc gctttaacg caccacatt 
      ggtgatctg attcccggt attctattt tcactgagt 
      gaaaaaaat gggagcagt aacatgaaa attgacggc 
      ttgtcgttt ctcctgtgt cttttggca tcgcaccct 
      cctgaagtt tttcatccc catatcaat atcctccta 
      ccgcacatc atagctaac gtgggtgat aacttttat 
      aaaatcaca gctgaagct ttgaacgtt ctgaaagag 
      ctggtcaag gtcattcgt cctctggac cgcgactcg 
      aacttcgat ttcacgccc tttgtgaag gaaatctac 
      ctctgtact ttatcgcgt ttaaagacg tccgattta 
      gatcaagag gtcaaggaa aaagctatc tcgaccatg 
      gggcaaatt atttgcaac ctgggtgat cacctaggg 
      agtgaattg tcctgctgt cttcctttg ttcctcgat 
      agattacgt aacgaaatc acgaggttg actacagtt 
      aaagcgttg accaaaatt gcgggctct ccattgggc 
      atcgaacta ccgattttg gacgaagca gtgccggtt 
      ttggggctc ttcctgcgt aaaaaccag cgtgcttta 
      aaactaagt actttgcaa ctcattgat tgtttaata 
      aagaattac cacgtctac atgtacgtg gaattactc 
      caacatgta atagtagaa gtgccacca ctccttgac 
      gagtccgac ctgcacata gcccagtac actttggtg 
      atcttgaag tcgattgcg gaataccac cccctggct 
      ttgcaagac ctgccaaca aacatcttc ccgcaaatc 
      ttggtcttg gtgaagtcg cctcttctg caaggttcc 
      gccctgaat tccatgctg gaattcttc aaaactcta 
      gtccaatgc aaccttccg ggattgtcc tacaacgac 
      ttgttgcaa tttctcgtt cacccgatc agcattagc 
      cagggttct ggggccggt gacgccgtc atccacaag 
      caagcctat tactcgttg gccaaatgc gtggctgct 
      ataacagtg acgatgcaa caccaagcg ttgcaaatc 
      gtcccccaa ttcatcaac gaaattcgc tcttcgcgc 
      cacgacgcc cagaagatc ttcactttg ctcgtggtc 
      ggcgaaatc gggcgcgaa atcgatttg accggattt 
      gccaacttg gagcaaatc atctccgag gcgtttttc 
      gccgtgtct gaggaagtc aagtccgct gcgagctac 
      gctttgggc agcattgcc atcgggaac ttgcagcaa 
      tatcttccg tttatcctg accgaggat gagaacgag 
      ccccgaaga cagtacttg ttgcttcac tctttgaag 
      gaagtcatc gcgtgtctg tcttcaaca ccggagggc 
      atccagcaa ttactgcct ttcgtgccc gcgatttgg 
      gacactttg taccgccac tgcgagagt gaggaggaa 
      gggacaagg aacgtagtt tcggaatgt ttgggcaaa 
      ttgactctg attgacccg aaccatttg ctgccgaag 
      ttgaaggaa tcgctgggc tccgagtcc tcgctcatg 
      cgcacgacg atagtgacg gcgatcaag tttacgatt 
      tctgaccag cctgcttca attgacgca ttgttgcgg 
      caatgcatt ggcgaattt ttgaatact ttggaggat 
      cccgacttg aatgtgaga cgagtggcg cttgtggct 
      ttcaactcg gctgctcac aacaagccc tcgctgatc 
      cgtgatttg cttgacacg attttgccc cgtctatac 
      cacgagact aacattaag cgagaacta atccgtgaa 
      gttgagatg ggcccattc aagcatacc gttgatgac 
      ggcttggac ctgcgcaag gcagcgttc gagtgcatg 
      tacaccttg cttgattct tgtttggac agaatcgat 
      attttcgaa tttatcaat cacgttgaa cttggcctt 
      aaagaccat tacgatatt aaaatgtta acttattta 
      atggtgtcg cgactagct caaatatgc cccggcgcc 
      gtattgcaa agcttagat agactggtc gagcccttg 
      aaggcaact tgtaccatg aaagttaaa gcaaattcg 
      gttaaacag gaatacgag aaacaggat gaacttaag 
      agaagtgcc cttcgggct gttgtttct cttttaagc 
      attcctgat gccgataaa aatcaacac ttgaacgaa 
      tttgtcacc caaatcaag acttctccc gacctagcc 
      cagattttc gactcgatc cagaaagat tccgctaat 
      aatattaac gatttcttt ttgatggat cagagttag
    mRNA sequence
    • >TC010870 RA
      tagctgtct taaatctca attcatcta gtgcattag 
      agtgtgaaa ttgaataaa aactgttgt tttgtcaag 
      gttttggat tacgtgagc caacctgag cttgggatc 
      ccccgcaca gaggtgaag aaatccgac tgtaaaggt 
      aagccacga aattttttg acactacta acttcgcaa 
      caaatcaag acttttgtc gatttcggt agatttcta 
      aagtggcaa caaatgacg aacttacac acgatatga 
      tttagcttt atttccttt tagcaaaac gataaattt 
      tggatttaa acggtgtgt gcttgatca tacaaaatg 
      gccgaagaa caacaacag ggtgatgaa agtaaccct 
      tacgagcaa ggtgatcat gcttttgag ctagatgat 
      cttgaacgt gctttggta acatgcgag taagtattc 
      acgggtttg aatttggcg ctagattct atgaatgcg 
      cacgcgtag tacggtccc acttaattg tatttttat 
      gtctttccg gtacacacg aagtgacga taataggtg 
      ttttcggct tattcaaaa tcttgtgtg tttagttta 
      ttccaaaat tccacaatt ttgaaatat tggaaggtt 
      cccaaccgc acgcctatg gcgccgctt tggagtgta 
      gtggggatt taatttgtt attaaaata tcggaattt 
      actatatga tttgaaaaa tatcaatta ctgtacaaa 
      ataacgcgt aaatgggtg caaattttt gtcaaatca 
      ctttagccg gtataacaa taaatcgca gttggtact 
      ccggtgtct gaggttgtc attattatt gtggtggat 
      tgatataag ctagtgaat aataaaaat ttccaaatt 
      ttcattatt agtgatatt ataagtgta attattgtg 
      atttactta ctttgttag tgatagctg tatttcatg 
      tctaatttg tacatgcag aacgacaca catagtaaa 
      ttatttaca attttcgta ctctaacct aaaagaact 
      agatgaaat gctcatata aattcagtc ttacaataa 
      aaaactgtt ttatttaac atcaatttg cttaaagac 
      ttcgcagtt acgttgatc aagtagtag aagacgctg 
      cagagatgg ctagtgtct cttaccaga ttgccaatc 
      ttcttgaga agatgcaat catctgaca aagattttc 
      gatttatgg ccacaaacg atttaatgg ccgaactgc 
      agaaagata gtatcaaat tagatgatg attcggaac 
      gaaaggttg taagaatgt tgttgaaac tacttgaag 
      ataaaaacg gtgaagtac aaaacttgg ctgtcaaat 
      gtctggggc ctttagtta acaaagtta aggaattcc 
      aagtggaga ccattgttg aggccttgt gcaccaaca 
      tggtctccg acaaggagc aactgcggg atatttcca 
      gcattgggc tcaagacgg ttatcgctg aactgccac 
      aggcacctg ggggcctct ccggaaaca tttgcaagc 
      ggatcaccg gtcgtttga cgactgcta tcgaaaggc 
      aagacgacg tgtccgtgc aactggaag ctctcgaca 
      ttgtcacgg atttgttat accgctttg gcaacgttt 
      tgcaatcct accatgcct ccatattaa acgccctct 
      tacctcagt tatgctcac aacggcaag cagtccgca 
      aacgtacga ttgcagctt gcagtaact tagttctct 
      cgtgcaaca atgcattgt acgataaac taatcgagc 
      atctgtaca acgggatga gaactgata acaagaact 
      cccaaattc gcacctacg tgcagtgca ttgcagccg 
      tgtgccgac aatcgggcc acaagttcg gcgaacata 
      ttgaaaagt tcgtacctt tgatccaaa tgtggagcg 
      ctgtggaag acgacgaga ccagagagt tttgtttac 
      aagcttttg agagtttta tcaatcgtt gtcccaaag 
      aaatcaccc cgaaaatca gcgccatca cagacttgt 
      gcctaaatt acatgactc atgacccga attacaact 
      acgacgaag atggggatg atcgagcca tgggggctt 
      acgatgacg aggaagaag aggagaatg acgagtaca 
      gcgatgacg atgacatga gctggaaag tgagacgtg 
      cagctgcca agtgcttgg agtcgatca tctgcactc 
      gccatgaat tattgtctg aattttaca aggttttgt 
      cgcctgtgt taatctccc ggtttaaag agcgggaag 
      agaacgtga aatcagata ttttccgtg cttacatcg 
      cgcttttga gacaaacaa aatcgactg ttaacgtga 
      atatcgatc cgaactcca tggagcagg aggagatgc 
      ccatttact tgctccagc agcaagttc caatgattg 
      tgaaaggcg tgcagtcgc aaatgaagg aaaagagca 
      cgaagacgc gccaagact gcttccagc tcctaaaag 
      aattatgca atgtcctac cgggcgctt taacgcacc 
      acattggtg atctgattc ccggtattc tattttcac 
      tgagtgaaa aaaatggga gcagtaaca tgaaaattg 
      acggcttgt cgtttctcc tgtgtcttt tggcatcgc 
      accctcctg aagtttttc atccccata tcaatatcc 
      tcctaccgc acatcatag ctaacgtgg gtgataact 
      tttataaaa tcacagctg aagctttga acgttctga 
      aagagctgg tcaaggtca ttcgtcctc tggaccgcg 
      actcgaact tcgatttca cgccctttg tgaaggaaa 
      tctacctct gtactttat cgcgtttaa agacgtccg 
      atttagatc aagaggtca aggaaaaag ctatctcga 
      ccatggggc aaattattt gcaacctgg gtgatcacc 
      tagggagtg aattgtcct gctgtcttc ctttgttcc 
      tcgatagat tacgtaacg aaatcacga ggttgacta 
      cagttaaag cgttgacca aaattgcgg gctctccat 
      tgggcatcg aactaccga ttttggacg aagcagtgc 
      cggttttgg ggctcttcc tgcgtaaaa accagcgtg 
      ctttaaaac taagtactt tgcaactca ttgattgtt 
      taataaaga attaccacg tctacatgt acgtggaat 
      tactccaac atgtaatag tagaagtgc caccactcc 
      ttgacgagt ccgacctgc acatagccc agtacactt 
      tggtgatct tgaagtcga ttgcggaat accaccccc 
      tggctttgc aagacctgc caacaaaca tcttcccgc 
      aaatcttgg tcttggtga agtcgcctc ttctgcaag 
      gttccgccc tgaattcca tgctggaat tcttcaaaa 
      ctctagtcc aatgcaacc ttccgggat tgtcctaca 
      acgacttgt tgcaatttc tcgttcacc cgatcagca 
      ttagccagg gttctgggg ccggtgacg ccgtcatcc 
      acaagcaag cctattact cgttggcca aatgcgtgg 
      ctgctataa cagtgacga tgcaacacc aagcgttgc 
      aaatcgtcc cccaattca tcaacgaaa ttcgctctt 
      cgcgccacg acgcccaga agatcttca ctttgctcg 
      tggtcggcg aaatcgggc gcgaaatcg atttgaccg 
      gatttgcca acttggagc aaatcatct ccgaggcgt 
      ttttcgccg tgtctgagg aagtcaagt ccgctgcga 
      gctacgctt tgggcagca ttgccatcg ggaacttgc 
      agcaatatc ttccgttta tcctgaccg aggatgaga 
      acgagcccc gaagacagt acttgttgc ttcactctt 
      tgaaggaag tcatcgcgt gtctgtctt caacaccgg 
      agggcatcc agcaattac tgcctttcg tgcccgcga 
      tttgggaca ctttgtacc gccactgcg agagtgagg 
      aggaaggga caaggaacg tagtttcgg aatgtttgg 
      gcaaattga ctctgattg acccgaacc atttgctgc 
      cgaagttga aggaatcgc tgggctccg agtcctcgc 
      tcatgcgca cgacgatag tgacggcga tcaagttta 
      cgatttctg accagcctg cttcaattg acgcattgt 
      tgcggcaat gcattggcg aatttttga atactttgg 
      aggatcccg acttgaatg tgagacgag tggcgcttg 
      tggctttca actcggctg ctcacaaca agccctcgc 
      tgatccgtg atttgcttg acacgattt tgccccgtc 
      tataccacg agactaaca ttaagcgag aactaatcc 
      gtgaagttg agatgggcc cattcaagc ataccgttg 
      atgacggct tggacctgc gcaaggcag cgttcgagt 
      gcatgtaca ccttgcttg attcttgtt tggacagaa 
      tcgatattt tcgaattta tcaatcacg ttgaacttg 
      gccttaaag accattacg atattaaaa tgttaactt 
      atttaatgg tgtcgcgac tagctcaaa tatgccccg 
      gcgccgtat tgcaaagct tagatagac tggtcgagc 
      ccttgaagg caacttgta ccatgaaag ttaaagcaa 
      attcggtta aacaggaat acgagaaac aggatgaac 
      ttaagagaa gtgcccttc gggctgttg tttctcttt 
      taagcattc ctgatgccg ataaaaatc aacacttga 
      acgaatttg tcacccaaa tcaagactt ctcccgacc 
      tagcccaga ttttcgact cgatccaga aagattccg 
      ctaataata ttaacgatt tctttttga tggatcaga 
      gttagacat tttcaaagt tactatttt ttcgacgtt 
      tgttcaatt ttttgttct agttcattt tcgttgtgt 
      ttcatttgt tcattcata tttttcata ttttttcaa 
      atctatgta attgatctg aattaataa agctgtgtt 
      tcaaca
    • >TC010870 RB
      tagctgtct taaatctca attcatcta gtgcattag 
      agtgtgaaa ttgaataaa aactgttgt tttgtcaag 
      gttttggat tacgtgagc caacctgag cttgggatc 
      ccccgcaca gaggtgaag aaatccgac tgtaaaggt 
      aagccacga aattttttg acactacta acttcgcaa 
      caaatcaag acttttgtc gatttcggt agatttcta 
      aagtggcaa caaatgacg aacttacac acgatatga 
      tttagcttt atttccttt tagcaaaac gataaattt 
      tggatttaa acggtgtgt gcttgatca tacaaaatg 
      gccgaagaa caacaacag ggtgatgaa agtaaccct 
      tacgagcaa ggtgatcat gcttttgag ctagatgat 
      cttgaacgt gctttggta acatgcgaa cttcgcagt 
      tacgttgat caagtagta gaagacgct gcagagatg 
      gctagtgtc tcttaccag attgccaat cttcttgag 
      aagatgcaa tcatctgac aaagatttt cgatttatg 
      gccacaaac gatttaatg gccgaactg cagaaagat 
      agtatcaaa ttagatgat gattcggaa cgaaaggtt 
      gtaagaatg ttgttgaaa ctacttgaa gataaaaac 
      ggtgaagta caaaacttg gctgtcaaa tgtctgggg 
      cctttagtt aacaaagtt aaggaattc caagtggag 
      accattgtt gaggccttg tgcaccaac atggtctcc 
      gacaaggag caactgcgg gatatttcc agcattggg 
      ctcaagacg gttatcgct gaactgcca caggcacct 
      gggggcctc tccggaaac atttgcaag cggatcacc 
      ggtcgtttg acgactgct atcgaaagg caagacgac 
      gtgtccgtg caactggaa gctctcgac attgtcacg 
      gatttgtta taccgcttt ggcaacgtt ttgcaatcc 
      taccatgcc tccatatta aacgccctc ttacctcag 
      ttatgctca caacggcaa gcagtccgc aaacgtacg 
      attgcagct tgcagtaac ttagttctc tcgtgcaac 
      aatgcattg tacgataaa ctaatcgag catctgtac 
      aacgggatg agaactgat aacaagaac tcccaaatt 
      cgcacctac gtgcagtgc attgcagcc gtgtgccga 
      caatcgggc cacaagttc ggcgaacat attgaaaag 
      ttcgtacct ttgatccaa atgtggagc gctgtggaa 
      gacgacgag accagagag ttttgttta caagctttt 
      gagagtttt atcaatcgt tgtcccaaa gaaatcacc 
      ccgaaaatc agcgccatc acagacttg tgcctaaat 
      tacatgact catgacccg aattacaac tacgacgaa 
      gatggggat gatcgagcc atgggggct tacgatgac 
      gaggaagaa gaggagaat gacgagtac agcgatgac 
      gatgacatg agctggaaa gtgagacgt gcagctgcc 
      aagtgcttg gagtcgatc atctgcact cgccatgaa 
      ttattgtct gaattttac aaggttttg tcgcctgtg 
      ttaatctcc cggtttaaa gagcgggaa gagaacgtg 
      aaatcagat attttccgt gcttacatc gcgcttttg 
      agacaaaca aaatcgact gttaacgtg aatatcgat 
      ccgaactcc atggagcag gaggagatg cccatttac 
      ttgctccag cagcaagtt ccaatgatt gtgaaaggc 
      gtgcagtcg caaatgaag gaaaagagc acgaagacg 
      cgccaagac tgcttccag ctcctaaaa gaattatgc 
      aatgtccta ccgggcgct ttaacgcac cacattggt 
      gatctgatt cccggtatt ctattttca ctgagtgaa 
      aaaaatggg agcagtaac atgaaaatt gacggcttg 
      tcgtttctc ctgtgtctt ttggcatcg caccctcct 
      gaagttttt catccccat atcaatatc ctcctaccg 
      cacatcata gctaacgtg ggtgataac ttttataaa 
      atcacagct gaagctttg aacgttctg aaagagctg 
      gtcaaggtc attcgtcct ctggaccgc gactcgaac 
      ttcgatttc acgcccttt gtgaaggaa atctacctc 
      tgtacttta tcgcgttta aagacgtcc gatttagat 
      caagaggtc aaggaaaaa gctatctcg accatgggg 
      caaattatt tgcaacctg ggtgatcac ctagggagt 
      gaattgtcc tgctgtctt cctttgttc ctcgataga 
      ttacgtaac gaaatcacg aggttgact acagttaaa 
      gcgttgacc aaaattgcg ggctctcca ttgggcatc 
      gaactaccg attttggac gaagcagtg ccggttttg 
      gggctcttc ctgcgtaaa aaccagcgt gctttaaaa 
      ctaagtact ttgcaactc attgattgt ttaataaag 
      aattaccac gtctacatg tacgtggaa ttactccaa 
      catgtaata gtagaagtg ccaccactc cttgacgag 
      tccgacctg cacatagcc cagtacact ttggtgatc 
      ttgaagtcg attgcggaa taccacccc ctggctttg 
      caagacctg ccaacaaac atcttcccg caaatcttg 
      gtcttggtg aagtcgcct cttctgcaa ggttccgcc 
      ctgaattcc atgctggaa ttcttcaaa actctagtc 
      caatgcaac cttccggga ttgtcctac aacgacttg 
      ttgcaattt ctcgttcac ccgatcagc attagccag 
      ggttctggg gccggtgac gccgtcatc cacaagcaa 
      gcctattac tcgttggcc aaatgcgtg gctgctata 
      acagtgacg atgcaacac caagcgttg caaatcgtc 
      ccccaattc atcaacgaa attcgctct tcgcgccac 
      gacgcccag aagatcttc actttgctc gtggtcggc 
      gaaatcggg cgcgaaatc gatttgacc ggatttgcc 
      aacttggag caaatcatc tccgaggcg tttttcgcc 
      gtgtctgag gaagtcaag tccgctgcg agctacgct 
      ttgggcagc attgccatc gggaacttg cagcaatat 
      cttccgttt atcctgacc gaggatgag aacgagccc 
      cgaagacag tacttgttg cttcactct ttgaaggaa 
      gtcatcgcg tgtctgtct tcaacaccg gagggcatc 
      cagcaatta ctgcctttc gtgcccgcg atttgggac 
      actttgtac cgccactgc gagagtgag gaggaaggg 
      acaaggaac gtagtttcg gaatgtttg ggcaaattg 
      actctgatt gacccgaac catttgctg ccgaagttg 
      aaggaatcg ctgggctcc gagtcctcg ctcatgcgc 
      acgacgata gtgacggcg atcaagttt acgatttct 
      gaccagcct gcttcaatt gacgcattg ttgcggcaa 
      tgcattggc gaatttttg aatactttg gaggatccc 
      gacttgaat gtgagacga gtggcgctt gtggctttc 
      aactcggct gctcacaac aagccctcg ctgatccgt 
      gatttgctt gacacgatt ttgccccgt ctataccac 
      gagactaac attaagcga gaactaatc cgtgaagtt 
      gagatgggc ccattcaag cataccgtt gatgacggc 
      ttggacctg cgcaaggca gcgttcgag tgcatgtac 
      accttgctt gattcttgt ttggacaga atcgatatt 
      ttcgaattt atcaatcac gttgaactt ggccttaaa 
      gaccattac gatattaaa atgttaact tatttaatg 
      gtgtcgcga ctagctcaa atatgcccc ggcgccgta 
      ttgcaaagc ttagataga ctggtcgag cccttgaag 
      gcaacttgt accatgaaa gttaaagca aattcggtt 
      aaacaggaa tacgagaaa caggatgaa cttaagaga 
      agtgccctt cgggctgtt gtttctctt ttaagcatt 
      cctgatgcc gataaaaat caacacttg aacgaattt 
      gtcacccaa atcaagact tctcccgac ctagcccag 
      attttcgac tcgatccag aaagattcc gctaataat 
      attaacgat ttctttttg atggatcag agttagaca 
      ttttcaaag ttactattt tttcgacgt ttgttcaat 
      tttttgttc tagttcatt ttcgttgtg tttcatttg 
      ttcattcat atttttcat attttttca aatctatgt 
      aattgatct gaattaata aagctgtgt ttcaaca
    The data is licensed under a Creative Commons Attribution 3.0 Unported License. (CC-BY) CC-BY