| General information | |||
| TC015608 | Gene
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
NC_007421.3: 3394996..3416843 | |
| Sequence information | |||
| Transcripts / Proteins (3) | Get mRNA sequence
Get CDS sequence Get protein sequence |
||
| Ortholog information (from OrthoDB)
The information about the homolog genes in Drosophila
is provided by OrthoDB http://www.orthodb.org/.
The homologs are sorted according to their similarity score. For an orthology statement additional
analysis are required. | |||
| Closest fly homologs |
|
TC015608 | |
GO terms for Tribolium
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There are no GO terms for Tribolium at the moment. You can help the community by providing some GO terms for this gene.
GO terms for the homologous Drosophila genes
Assign a GO term to this Tribolium gene by filling in the fields. Repeat to add several GO terms. Search AmiGO for the correct GO ID. Use only the most specific term - use "graph views" to browse related terms ("child terms" are more specific; the more general "parent" terms will be automatically linked). Only information based on Tribolium data should be entered - do not define terms just based on Drosophila knowledge. We will review this information and submit the annotation to the Gene Ontology consortium.
| Gene | {{ goGene }} |
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|---|---|---|
| GO ID | * {{ blurIdResult }} |
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| Evidence | {{ blurEvidenceResult }} |
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| Reference | * {{ blurReferenceResult }} |
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| Quotation | ||
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| Publish name | ||
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* : mandatory fields
For help on how to submit larger datasets or non experimental data please contact us.
Attention! iBeetle is a first pass screen. Hence, the documented phenotypes need to be confirmed by independent experiments using non-overlapping dsRNA fragments! Phenotypes with a penetrance > 50% are frequently reproduced. See Schmitt-Engel et al. 2015 for details on reproducibility.
| General information | ||||
| iB_05848 | iB fragment
The sequence from the iB fragment is matched against the genes from the official gene set. The matche(s) is/are visualizied in a genome browser. |
Get FastA Get primers |
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Usually 10 injected animals
Pupal injection procedure
Day 0: 10 female pupae of the pBA19 strain (muscle enhancer trap line) were injected with dsRNA.
3 days post injection (dpi): Hatch control: Pupal and adult lethality as well as metamorphosis defects (molting, eclosion) were documented. For mating, 4 males of the black strain were added.
9 dpi: First egg-lay was collected and incubated for cuticle analysis. Adult lethality and egg production (reduced/ no egg-lay) was documented.
11 dpi: Second egg-lay was collected and incubated for embryonic muscle analysis. Adult lethality and egg production (reduced/ no egg-lay) were documented.
Note: The adult morphology was not analyzed systematically at 3/9/11 dpi. Only obvious phenotypes, visible without magnification, have been annotated.
13 dpi: Egg productivity and Ovary analysis
The percentage of hatched larvae was documented and not hatched larvae/ eggs were embedded for cuticle analysis (15 dpi).
In case of a reduction of egg production, 4 injected females were dissected to analyze the gross morphology of the ovaries.
14 dpi: Analysis of embryonic musculature and early embryonic development
Offspring of the injected females (hatched and not hatched larvae/ eggs) were analysed for embryonic lethality and muscle defects.
15 dpi: Analysis of larval instar 1 cuticle
Offspring of injected females were analysed and cuticle phenotypes were annotated.
22 dpi: Stink gland analysis
Documentation of defects in abdominal and thoracic stink glands (colour, size, content) of the injected femals.
Terms used in the pupal injection procedure
- larval pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- empty eggs
- Just empty shells are visible, no cuticle has been developed.
- strong defects
- L1 cuticle larvae which show severe defects. These strong defects are subdivided into three categories
- strongly fragmented (cuticle crumbs)
- No segments or appendages are identifiable, only residues of cuticle and bristles can be identified.
- cuticle remnants (with unidentifiable segments)
- Segments or parts of appendages are recognizable, but identity is not clear.
- cuticle remnants (with some identifiable segments)
- At least one segment or appendage is clearly regonizable.
- number of eggs on slide
- affected embryos usually (not always) do not hatch. Only the not hatched were used for cuticle analysis.
For the embryonic muscle analysis the hatched as well as the not hatched were analysed. - total number of affected eggs/embryos/larvae
- Summary of all different phenotypes/ phenotypic series which were annotated.
- inside-out
- The L1 larva shows a partial or complete inversion., e.g. bristles, appendages or parts of the abdominal segments are inverted into the interior of the cuticle.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
Metamorphosis and survival
Lethality 11 days after pupal injection: 10.0% (includes death as pupa, adult)
eclosion not fulfilled (with pupal and adult features) - Number of animals showing the phenotype: 1 (3 dpi)Days post injection
Fertility
vitellogenic egg chamber early increased -
Number of animals showing the phenotype: 4
vitellogenic egg chamber late not present - Number of animals showing the phenotype: 4
egg chamber sometimes potentiallyfused - Number of animals showing the phenotype: 4
vitellogenic egg chamber late not present - Number of animals showing the phenotype: 4
egg chamber sometimes potentiallyfused - Number of animals showing the phenotype: 4
Usually 10 injected animals
Larval injection procedure
Day 0: 10 female L5-6 larvae of the D17Xhom strain (females express RFP in the eyes and in the CNS; pupae express GFP in the thorax) were injected with dsRNA.
11 days post injection (dpi): Pupal morphology Documentation of larval/ pupal death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of pupal head and appendages, pupal thorax, pupal thoracic musculature, pupal legs, pupal wings, pupal abdomen and pupal genital lobes.
16 dpi: Adult morphology Documentation of larval/ pupal and adult death and defects of metamorphosis (eclosion, delayed development). Screening for alterations of adult head and appendages, adult thorax, adult elytra and hindwings, adult legs and cuticle properties. For mating 4 males of the black strain were added.
19 dpi: Sieving and egg-lay Documentation of adult lethality and enduring metamorphosis defects.
22 dpi: Ovary analysis (Fertility) In case of a reduction of egg production 4 females were dissected and the gross morphology of the ovaries were analysed.
41 dpi: Fertility and stink gland analysis Documentation of defects in abdominal and thoracic stink glands development (colour, size, content) of the injected females. Check for fertility of injected larvae (no or decreased offspring).
Terms used in the larval injection procedure
- pupal/ adult pantagmatic defects
- At least two tagmata (head, thorax, abdomen or terminus) show similar/ comparable defects.
- pupal molt not fulfilled
- The hatching from the larva to the pupa is interrupted. Either it dies as prepupa or the phenotype shows larval as well as pupal features.
- eclosion not fulfilled
- The emergence of the adult from the pupa stage is interrupted. This phenotype shows pupal as well as adult features.
- starved
- Dissected females show a strong resorption of fatbody predominately in the abdomen and the oogenesis is blocked. These are considered as eventually lethal phenotypes and the blocked oogenesis probably a secondary defect due to starvation.
Metamorphosis and survival
Lethalities 11 days after larval injection: -1.0% (includes death as larva, prepupa, pupa)
Lethalities 22 days after larval injection: -1.0% (includes death as larva, prepupa, pupa, adult)
- >TC015608 RA
MSVTEEASA APADAPPVN GDEQGASLT GSTEFSDPA ILAVNPKFR YEKEELLKL RDAPLSQRK PDFLDVNEV SPTIWDPTR WNFDKKKSE TPTENGPRT VDDHRRRPG DPRERIRKE NDGIVLSPQ RRSFNSGCS IPGRETRTN NTNRPHSPL GKNESHLSG VREIQTNSR RIGSGRILR DSWDFGEKQ ENETEYNFR PQQRSENQE RRSFGRDFD VGRDKEKRN GGRFNERRR ISGESRDEE PEWFSSGPS SQNDTIELR GFDDSDRLG KKKMSPSQA KRARDWFKK KTEVSSVTE EKEEMSEGG PGGRSTPTP QSGSGETIG GEQTNESNT NASESGDGD GKHNQEKNL NDQSSIFED ILKSDSIPG LPGLLTNGV GGDGDATGK SRFSKWFSV ESNASESRR SSMQDEPIF KNLLKDLNE PSVSIPGDS NSYFAPISP AANTGGSLG GAGGGTAKS INIMEMLQR GKQSETGGM KQQVPGRIM NLDELEAKM RQNTEPQMH KHPQKSEED MTAFNRLLA HISGNHTAT ANGPVPKTQ PMSLMEMLS HSQQQDEAH ARMAQLLGP SSPGASPHD IAGRLQQQV QSQQQKEML SKLMSANMP VRASPLSEM GIQQSRELL SRPEAQAIL QALHQRIPS PRELQVHTQ NILQRALIK KKLEEQQEN YRKKQEMQQ RGQSPNNNN NNNNTTNQA KSVSSPTPL AFTPTSVLR KMTAEKDEG GKDVTKLVE GAKLSQGRA VTGMRPQQQ PQQQQQQQQ WPQYPLNIK QAGRPIVKA NTFQQQQPQ QQEQFFTQQ QQQKFLNQL QQQQQQQRK ATNYHGHGS MQGHHSQYP NTNNQQFSQ LTQQQLRAQ HQQHARPTN VVQQQQQGH GRAWQQYLN PQQTRGQVG RGGTDGDLS PTSNQLTRW FSPDLLERA RVGELPSTA GLSQNLLSL EEIERLTAP PVHN
- >TC015608 RB
MAKSRALKT NKLNETPGK KSTQTKHVS WRDEQGASL TGSTEFSDP AILAVNPKF RYEKEELLK LRDAPLSQR KPDFLDVNE VSPTIWDPT RWNFDKKKS ETPTENGPR TVDDHRRRP GDPRERIRK ENDGIVLSP QRRSFNSGC SIPGRETRT NNTNRPHSP LGKNESHLS GVREIQTNS RRIGSGRIL RDSWDFGEK QENETEYNF RPQQRSENQ ERRSFGRDF DVGRDKEKR NGGRFNERR RISGESRDE EPEWFSSGP SSQNDTIEL RGFDDSDRL GKKKMSPSQ AKRARDWFK KKTEVSSVT EEKEEMSEG GPGGRSTPT PQSGSGETI GGEQTNESN TNASESGDG DGKHNQEKN LNDQSSIFE DILKSDSIP GLPGLLTNG VGGDGDATG KSRFSKWFS VESNASESR RSSMQDEPI FKNLLKDLN EPSVSIPGD SNSYFAPIS PAANTGGSL GGAGGGTAK SINIMEMLQ RGKQSETGG MKQQVPGRI MNLDELEAK MRQNTEPQM HKHPQKSEE DMTAFNRLL AHISGNHTA TANGPVPKT QPMSLMEML SHSQQQDEA HARMAQLLG PSSPGASPH DIAGRLQQQ VQSQQQKEM LSKLMSANM PVRASPLSE MGIQQSREL LSRPEAQAI LQALHQRIP SPRELQVHT QNILQRALI KKKLEEQQE NYRKKQEMQ QRGQSPNNN NNNNNTTNQ AKSVSSPTP LAFTPTSVL RKMTAEKDE GGKDVTKLV EGAKLSQGR AVTGMRPQQ QPQQQQQQQ QWPQYPLNI KQAGRPIVK ANTFQQQQP QQQEQFFTQ QQQQKFLNQ LQQQQQQQR KATNYHGHG SMQGHHSQY PNTNNQQFS QLTQQQLRA QHQQHARPT NVVQQQQQG HGRAWQQYL NPQQTRGQV GRGGTDGDL SPTSNQLTR WFSPDLLER ARVGELPST AGLSQNLLS LEEIERLTA PPVHN
- >TC015608 RC
MAKSRALKT NKLNETPGK KSTQTKHVS WRDEQGASL TGSTEFSDP AILAVNPKF RYEKEELLK LRDAPLSQR KPDFLDVNE VSPTIWDPT RWNFDKKKS ETPTENGPR TVDDHRRRP GDPRERIRK ENDGIVLSP QRRSFNSGC SIPGRETRT NNTNRPHSP LGKNESHLS GVREIQTNS RRIGSGRIL RDSWDFGEK QENETEYNF RPQQRSENQ ERRSFGRDF DVGRDKEKR NGGRFNERR RISGESRDE EPEWFSSGP SSQNDTIEL RGFDDSDRL GKKKMSPSQ AKRARDWFK KKTEVSSVT EEKEEMSEG GPGGRSTPT PQSGSGETI GGEQTNESN TNASESGDG DGKHNQEKN LNDQSSIFE DILKSDSIP GLPGLLTNG VGGDGDATG KSRFSKWFS VESNASESR RSSMQDEPI FKNLLKDLN EPSVSIPGD SNSYFAPIS PAANTGGSL GGAGGGTAK SINIMEMLQ RGKQSETGG MKQLPGRIM NLDELEAKM RQNTEPQMH KHPQKSEED MTAFNRLLA HISGNHTAT ANGPVPKTQ PMSLMEMLS HSQQQDEAH ARMAQLLGP SSPGASPHD IAGRLQQQV QSQQQKEML SKLMSANMP VRASPLSEM GIQQSRELL SRPEAQAIL QALHQRIPS PRELQVHTQ NILQRALIK KKLEEQQEN YRKKQEMQQ RGQSPNNNN NNNNTTNQA KSVSSPTPL AFTPTSVLR KMTAEKDEG GKDVTKLVE GAKLSQGRA VTGMRPQQQ PQQQQQQQQ WPQYPLNIK QAGRPIVKA NTFQQQQPQ QQEQFFTQQ QQQKFLNQL QQQQQQQRK ATNYHGHGS MQGHHSQYP NTNNQQFSQ LTQQQLRAQ HQQHARPTN VVQQQQQGH GRAWQQYLN PQQTRGQVG RGGTDGDLS PTSNQLTRW FSPDLLERA RVGELPSTA GLSQNLLSL EEIERLTAP PVHN
- >TC015608 RA
atgtcggtg accgaagag gcttcggca gccccggca gacgcgccg cctgtcaac ggggacgaa caaggtgcc agtttgacc ggaagtacc gaattttcg gatccggcg attttggcc gtcaatccg aaatttcgt tacgaaaaa gaggagttg ttaaagttg cgagatgct ccattatct caacggaag cccgatttt ttggacgtc aatgaagtt tcgccgact atttgggac ccaactcgt tggaatttc gataagaaa aagtccgaa actccgacc gaaaacggg ccacggact gtagacgat cacaggcgt cgtcctggt gatccgcgc gaacgcatc cggaaggaa aacgacggg atcgtcttg agtccgcag cgccggagt ttcaattcc ggttgttca attccgggt cgcgagacg aggacgaac aacacgaat cggcctcat agtccttta gggaagaac gagtcgcat ttgagtggc gttagggag atacagacg aatagtcga aggatcgga agtgggaga attctaaga gattcgtgg gatttcggc gagaaacag gagaacgaa actgagtac aattttaga ccgcaacag aggagcgaa aatcaggag agaaggtcg tttgggcga gattttgac gtcggaagg gacaaggag aagaggaat ggtggaagg tttaacgag aggagaaga atcagcggc gaatcccgt gacgaggag cccgaatgg ttctcatcc ggtccgtct tcccaaaac gatacaatc gaattgcgc ggtttcgac gattcggat cgtctcgga aagaagaaa atgtcaccg tcgcaagcg aaacgcgca cgcgattgg ttcaaaaag aagactgaa gtgtcgagt gtgaccgaa gaaaaggaa gaaatgagc gaaggtggt cccggtggc cggtcaacg cctacgccg cagagcggt tcaggtgaa acaatcggc ggggaacaa acaaatgag tcaaacaca aacgcgtct gaaagtgga gatggtgac ggaaaacac aatcaagag aagaatctg aacgaccaa tcgtcgatt tttgaagat atcttgaag tcggatagt attcccgga ctgccaggg ttgttaact aatggtgtg ggtggtgac ggcgacgcg accgggaaa tcgcgtttc agtaaatgg ttttcagtg gaaagcaat gcgtctgaa agtcggcgt tcttccatg caggatgag ccgattttt aagaatttg ttgaaagat ttgaatgag ccaagtgtt tcgattccg ggtgattct aattcgtat ttcgcgccg atttcgccg gctgctaat acgggggga agtctagga ggtgcagga ggaggcact gccaagtcc attaatatt atggagatg ctacaaagg ggcaaacag agcgagact ggaggaatg aaacaacaa gtaccgggt cgtattatg aatttggac gagctggag gcgaagatg aggcaaaat actgagccg caaatgcac aaacatccc caaaaatct gaagaagac atgactgcg tttaaccga ttgttggca cacatttct gggaaccac acagctacg gcaaacggt ccagtcccc aaaactcag ccaatgagc ctaatggag atgctctcg cattcgcag caacaagat gaagctcac gctcgcatg gctcaactt ttaggtcca tcaagtcct ggtgcttca ccgcacgac atcgccggt cgtttacaa caacaagtc caaagtcaa caacagaaa gaaatgttg tcgaagttg atgagtgcc aatatgccg gtgagggct tcgcccctg tcagaaatg ggcatacaa caaagtcgc gaattgttg agtcggccc gaagcacaa gccatactt caagcgctc catcaacgc attccatcg ccccgtgaa ttacaagtc catacccaa aacattctc cagagggcg ctcattaag aaaaaactc gaagaacaa caagaaaac tatcgcaaa aaacaagaa atgcaacag cgtggtcaa agtcccaac aacaacaac aacaataac aatacaaca aatcaagcg aaaagtgtt tcgtctcca actccgtta gccttcacg ccaacttca gtattacga aaaatgaca gcggaaaaa gacgaaggc gggaaagac gtcacaaaa cttgtcgaa ggtgcaaaa ttgagtcaa ggtcgtgcc gtgactgga atgcgtccg caacaacag ccccaacaa caacaacag caacaacaa tggccacag tatccgttg aatatcaag caagctggt cgtccgatt gttaaagca aatacattt caacaacaa cagccacaa caacaggaa cagtttttt actcaacaa caacaacag aaatttcta aatcaattg caacaacaa cagcaacaa cagcgcaaa gctacgaat tatcacggc catggttcg atgcaaggt catcattcc caatatccc aacactaat aatcaacag ttctctcag ttgactcaa caacaactc agagctcaa catcaacaa cacgccaga ccgacaaat gtggtacaa caacaacag caaggacac gggagggcg tggcaacag taccttaat ccgcagcaa actaggggt caggtgggt cgtgggggc accgacggg gacctgtca ccaaccagc aaccagttg actcgctgg ttttcgccc gatttgttg gagagggcc cgcgtgggt gaattaccg agcacagcc ggcttgtct cagaattta ctcagtttg gaggagatc gaaagactt acagcccca ccggtccac aattaa
- >TC015608 RB
atggctaaa tcacgtgcg ttaaaaact aataaattg aacgaaacc cctggtaaa aaatcaact caaaccaaa cacgtgtct tggagggac gaacaaggt gccagtttg accggaagt accgaattt tcggatccg gcgattttg gccgtcaat ccgaaattt cgttacgaa aaagaggag ttgttaaag ttgcgagat gctccatta tctcaacgg aagcccgat tttttggac gtcaatgaa gtttcgccg actatttgg gacccaact cgttggaat ttcgataag aaaaagtcc gaaactccg accgaaaac gggccacgg actgtagac gatcacagg cgtcgtcct ggtgatccg cgcgaacgc atccggaag gaaaacgac gggatcgtc ttgagtccg cagcgccgg agtttcaat tccggttgt tcaattccg ggtcgcgag acgaggacg aacaacacg aatcggcct catagtcct ttagggaag aacgagtcg catttgagt ggcgttagg gagatacag acgaatagt cgaaggatc ggaagtggg agaattcta agagattcg tgggatttc ggcgagaaa caggagaac gaaactgag tacaatttt agaccgcaa cagaggagc gaaaatcag gagagaagg tcgtttggg cgagatttt gacgtcgga agggacaag gagaagagg aatggtgga aggtttaac gagaggaga agaatcagc ggcgaatcc cgtgacgag gagcccgaa tggttctca tccggtccg tcttcccaa aacgataca atcgaattg cgcggtttc gacgattcg gatcgtctc ggaaagaag aaaatgtca ccgtcgcaa gcgaaacgc gcacgcgat tggttcaaa aagaagact gaagtgtcg agtgtgacc gaagaaaag gaagaaatg agcgaaggt ggtcccggt ggccggtca acgcctacg ccgcagagc ggttcaggt gaaacaatc ggcggggaa caaacaaat gagtcaaac acaaacgcg tctgaaagt ggagatggt gacggaaaa cacaatcaa gagaagaat ctgaacgac caatcgtcg atttttgaa gatatcttg aagtcggat agtattccc ggactgcca gggttgtta actaatggt gtgggtggt gacggcgac gcgaccggg aaatcgcgt ttcagtaaa tggttttca gtggaaagc aatgcgtct gaaagtcgg cgttcttcc atgcaggat gagccgatt tttaagaat ttgttgaaa gatttgaat gagccaagt gtttcgatt ccgggtgat tctaattcg tatttcgcg ccgatttcg ccggctgct aatacgggg ggaagtcta ggaggtgca ggaggaggc actgccaag tccattaat attatggag atgctacaa aggggcaaa cagagcgag actggagga atgaaacaa caagtaccg ggtcgtatt atgaatttg gacgagctg gaggcgaag atgaggcaa aatactgag ccgcaaatg cacaaacat ccccaaaaa tctgaagaa gacatgact gcgtttaac cgattgttg gcacacatt tctgggaac cacacagct acggcaaac ggtccagtc cccaaaact cagccaatg agcctaatg gagatgctc tcgcattcg cagcaacaa gatgaagct cacgctcgc atggctcaa cttttaggt ccatcaagt cctggtgct tcaccgcac gacatcgcc ggtcgttta caacaacaa gtccaaagt caacaacag aaagaaatg ttgtcgaag ttgatgagt gccaatatg ccggtgagg gcttcgccc ctgtcagaa atgggcata caacaaagt cgcgaattg ttgagtcgg cccgaagca caagccata cttcaagcg ctccatcaa cgcattcca tcgccccgt gaattacaa gtccatacc caaaacatt ctccagagg gcgctcatt aagaaaaaa ctcgaagaa caacaagaa aactatcgc aaaaaacaa gaaatgcaa cagcgtggt caaagtccc aacaacaac aacaacaat aacaataca acaaatcaa gcgaaaagt gtttcgtct ccaactccg ttagccttc acgccaact tcagtatta cgaaaaatg acagcggaa aaagacgaa ggcgggaaa gacgtcaca aaacttgtc gaaggtgca aaattgagt caaggtcgt gccgtgact ggaatgcgt ccgcaacaa cagccccaa caacaacaa cagcaacaa caatggcca cagtatccg ttgaatatc aagcaagct ggtcgtccg attgttaaa gcaaataca tttcaacaa caacagcca caacaacag gaacagttt tttactcaa caacaacaa cagaaattt ctaaatcaa ttgcaacaa caacagcaa caacagcgc aaagctacg aattatcac ggccatggt tcgatgcaa ggtcatcat tcccaatat cccaacact aataatcaa cagttctct cagttgact caacaacaa ctcagagct caacatcaa caacacgcc agaccgaca aatgtggta caacaacaa cagcaagga cacgggagg gcgtggcaa cagtacctt aatccgcag caaactagg ggtcaggtg ggtcgtggg ggcaccgac ggggacctg tcaccaacc agcaaccag ttgactcgc tggttttcg cccgatttg ttggagagg gcccgcgtg ggtgaatta ccgagcaca gccggcttg tctcagaat ttactcagt ttggaggag atcgaaaga cttacagcc ccaccggtc cacaattaa
- >TC015608 RC
atggctaaa tcacgtgcg ttaaaaact aataaattg aacgaaacc cctggtaaa aaatcaact caaaccaaa cacgtgtct tggagggac gaacaaggt gccagtttg accggaagt accgaattt tcggatccg gcgattttg gccgtcaat ccgaaattt cgttacgaa aaagaggag ttgttaaag ttgcgagat gctccatta tctcaacgg aagcccgat tttttggac gtcaatgaa gtttcgccg actatttgg gacccaact cgttggaat ttcgataag aaaaagtcc gaaactccg accgaaaac gggccacgg actgtagac gatcacagg cgtcgtcct ggtgatccg cgcgaacgc atccggaag gaaaacgac gggatcgtc ttgagtccg cagcgccgg agtttcaat tccggttgt tcaattccg ggtcgcgag acgaggacg aacaacacg aatcggcct catagtcct ttagggaag aacgagtcg catttgagt ggcgttagg gagatacag acgaatagt cgaaggatc ggaagtggg agaattcta agagattcg tgggatttc ggcgagaaa caggagaac gaaactgag tacaatttt agaccgcaa cagaggagc gaaaatcag gagagaagg tcgtttggg cgagatttt gacgtcgga agggacaag gagaagagg aatggtgga aggtttaac gagaggaga agaatcagc ggcgaatcc cgtgacgag gagcccgaa tggttctca tccggtccg tcttcccaa aacgataca atcgaattg cgcggtttc gacgattcg gatcgtctc ggaaagaag aaaatgtca ccgtcgcaa gcgaaacgc gcacgcgat tggttcaaa aagaagact gaagtgtcg agtgtgacc gaagaaaag gaagaaatg agcgaaggt ggtcccggt ggccggtca acgcctacg ccgcagagc ggttcaggt gaaacaatc ggcggggaa caaacaaat gagtcaaac acaaacgcg tctgaaagt ggagatggt gacggaaaa cacaatcaa gagaagaat ctgaacgac caatcgtcg atttttgaa gatatcttg aagtcggat agtattccc ggactgcca gggttgtta actaatggt gtgggtggt gacggcgac gcgaccggg aaatcgcgt ttcagtaaa tggttttca gtggaaagc aatgcgtct gaaagtcgg cgttcttcc atgcaggat gagccgatt tttaagaat ttgttgaaa gatttgaat gagccaagt gtttcgatt ccgggtgat tctaattcg tatttcgcg ccgatttcg ccggctgct aatacgggg ggaagtcta ggaggtgca ggaggaggc actgccaag tccattaat attatggag atgctacaa aggggcaaa cagagcgag actggagga atgaaacaa ctaccgggt cgtattatg aatttggac gagctggag gcgaagatg aggcaaaat actgagccg caaatgcac aaacatccc caaaaatct gaagaagac atgactgcg tttaaccga ttgttggca cacatttct gggaaccac acagctacg gcaaacggt ccagtcccc aaaactcag ccaatgagc ctaatggag atgctctcg cattcgcag caacaagat gaagctcac gctcgcatg gctcaactt ttaggtcca tcaagtcct ggtgcttca ccgcacgac atcgccggt cgtttacaa caacaagtc caaagtcaa caacagaaa gaaatgttg tcgaagttg atgagtgcc aatatgccg gtgagggct tcgcccctg tcagaaatg ggcatacaa caaagtcgc gaattgttg agtcggccc gaagcacaa gccatactt caagcgctc catcaacgc attccatcg ccccgtgaa ttacaagtc catacccaa aacattctc cagagggcg ctcattaag aaaaaactc gaagaacaa caagaaaac tatcgcaaa aaacaagaa atgcaacag cgtggtcaa agtcccaac aacaacaac aacaataac aatacaaca aatcaagcg aaaagtgtt tcgtctcca actccgtta gccttcacg ccaacttca gtattacga aaaatgaca gcggaaaaa gacgaaggc gggaaagac gtcacaaaa cttgtcgaa ggtgcaaaa ttgagtcaa ggtcgtgcc gtgactgga atgcgtccg caacaacag ccccaacaa caacaacag caacaacaa tggccacag tatccgttg aatatcaag caagctggt cgtccgatt gttaaagca aatacattt caacaacaa cagccacaa caacaggaa cagtttttt actcaacaa caacaacag aaatttcta aatcaattg caacaacaa cagcaacaa cagcgcaaa gctacgaat tatcacggc catggttcg atgcaaggt catcattcc caatatccc aacactaat aatcaacag ttctctcag ttgactcaa caacaactc agagctcaa catcaacaa cacgccaga ccgacaaat gtggtacaa caacaacag caaggacac gggagggcg tggcaacag taccttaat ccgcagcaa actaggggt caggtgggt cgtgggggc accgacggg gacctgtca ccaaccagc aaccagttg actcgctgg ttttcgccc gatttgttg gagagggcc cgcgtgggt gaattaccg agcacagcc ggcttgtct cagaattta ctcagtttg gaggagatc gaaagactt acagcccca ccggtccac aattaa
- >TC015608 RA
gaaaggtga aagaaaggc atatggcgt acgtttcta tttttgcta aaatctcaa taaaattaa agtgaaaaa acggttagt gtcgtgcta gttgtgagg aagaaatcg aagattagt tcgcgttta tgatccaaa tgttcgacg gcaaaaaaa tccggtgat tttctgttt gtttacgta tgtgcgtat gttgagttt tttgttgac gaattatta gaaaaacgg actgtgata ttaaactta gttgtaaca tcgtttcgt aattagatt cctcgattt atttattaa ttaatgatt agggccgat ttagtgcgt aagtgaatt cgagagata acccaacac aaagactga attggacac gaattttac caaagacaa aaagacagt ttgtagatt agaaattgt tggtcgttt tgggatgtc ggtgaccga agaggcttc ggcagcccc ggcagacgc gccgcctgt caacgggga cgaacaagg tgccagttt gaccggaag taccgaatt ttcggatcc ggcgatttt ggccgtcaa tccgaaatt tcgttacga aaaagagga gttgttaaa gttgcgaga tgctccatt atctcaacg gaagcccga ttttttgga cgtcaatga agtttcgcc gactatttg ggacccaac tcgttggaa tttcgataa gaaaaagtc cgaaactcc gaccgaaaa cgggccacg gactgtaga cgatcacag gcgtcgtcc tggtgatcc gcgcgaacg catccggaa ggaaaacga cgggatcgt cttgagtcc gcagcgccg gagtttcaa ttccggttg ttcaattcc gggtcgcga gacgaggac gaacaacac gaatcggcc tcatagtcc tttagggaa gaacgagtc gcatttgag tggcgttag ggagataca gacgaatag tcgaaggat cggaagtgg gagaattct aagagattc gtgggattt cggcgagaa acaggagaa cgaaactga gtacaattt tagaccgca acagaggag cgaaaatca ggagagaag gtcgtttgg gcgagattt tgacgtcgg aagggacaa ggagaagag gaatggtgg aaggtttaa cgagaggag aagaatcag cggcgaatc ccgtgacga ggagcccga atggttctc atccggtcc gtcttccca aaacgatac aatcgaatt gcgcggttt cgacgattc ggatcgtct cggaaagaa gaaaatgtc accgtcgca agcgaaacg cgcacgcga ttggttcaa aaagaagac tgaagtgtc gagtgtgac cgaagaaaa ggaagaaat gagcgaagg tggtcccgg tggccggtc aacgcctac gccgcagag cggttcagg tgaaacaat cggcgggga acaaacaaa tgagtcaaa cacaaacgc gtctgaaag tggagatgg tgacggaaa acacaatca agagaagaa tctgaacga ccaatcgtc gatttttga agatatctt gaagtcgga tagtattcc cggactgcc agggttgtt aactaatgg tgtgggtgg tgacggcga cgcgaccgg gaaatcgcg tttcagtaa atggttttc agtggaaag caatgcgtc tgaaagtcg gcgttcttc catgcagga tgagccgat ttttaagaa tttgttgaa agatttgaa tgagccaag tgtttcgat tccgggtga ttctaattc gtatttcgc gccgatttc gccggctgc taatacggg gggaagtct aggaggtgc aggaggagg cactgccaa gtccattaa tattatgga gatgctaca aaggggcaa acagagcga gactggagg aatgaaaca acaagtacc gggtcgtat tatgaattt ggacgagct ggaggcgaa gatgaggca aaatactga gccgcaaat gcacaaaca tccccaaaa atctgaaga agacatgac tgcgtttaa ccgattgtt ggcacacat ttctgggaa ccacacagc tacggcaaa cggtccagt ccccaaaac tcagccaat gagcctaat ggagatgct ctcgcattc gcagcaaca agatgaagc tcacgctcg catggctca acttttagg tccatcaag tcctggtgc ttcaccgca cgacatcgc cggtcgttt acaacaaca agtccaaag tcaacaaca gaaagaaat gttgtcgaa gttgatgag tgccaatat gccggtgag ggcttcgcc cctgtcaga aatgggcat acaacaaag tcgcgaatt gttgagtcg gcccgaagc acaagccat acttcaagc gctccatca acgcattcc atcgccccg tgaattaca agtccatac ccaaaacat tctccagag ggcgctcat taagaaaaa actcgaaga acaacaaga aaactatcg caaaaaaca agaaatgca acagcgtgg tcaaagtcc caacaacaa caacaacaa taacaatac aacaaatca agcgaaaag tgtttcgtc tccaactcc gttagcctt cacgccaac ttcagtatt acgaaaaat gacagcgga aaaagacga aggcgggaa agacgtcac aaaacttgt cgaaggtgc aaaattgag tcaaggtcg tgccgtgac tggaatgcg tccgcaaca acagcccca acaacaaca acagcaaca acaatggcc acagtatcc gttgaatat caagcaagc tggtcgtcc gattgttaa agcaaatac atttcaaca acaacagcc acaacaaca ggaacagtt ttttactca acaacaaca acagaaatt tctaaatca attgcaaca acaacagca acaacagcg caaagctac gaattatca cggccatgg ttcgatgca aggtcatca ttcccaata tcccaacac taataatca acagttctc tcagttgac tcaacaaca actcagagc tcaacatca acaacacgc cagaccgac aaatgtggt acaacaaca acagcaagg acacgggag ggcgtggca acagtacct taatccgca gcaaactag gggtcaggt gggtcgtgg gggcaccga cggggacct gtcaccaac cagcaacca gttgactcg ctggttttc gcccgattt gttggagag ggcccgcgt gggtgaatt accgagcac agccggctt gtctcagaa tttactcag tttggagga gatcgaaag acttacagc cccaccggt ccacaatta atttaaaga tactcagta cctggcctc gactcttct aatttttgc aaatcaatg tcaacgaaa aggactctt atatttaac aatttagtg gcattattg tcgtagatg acgtgtcaa aaaaaggat ttctttcgt ttaaaatat actcaacga ccgaccggt gaagaagaa cgtgcgaca gattcgatt cattgaaaa tgtaatttt tgtatatag tcatggaaa atgatccaa ttgtgatag tcctagtaa gttaacgtc ggatcgggt ttgtcgcag aaaaaacgg tcgataaag ctccactag atgtgtgtg tgtgtcaga acgatggtt tagttctgt gtcgagttt ctgtgggat atttcggga aaaattttg ctttcgttt tggattctg atagcggag gtttcagtt gcggtttga tgttttctc taggatttt tcgtttcat tttggtgtt taatcgggg ctttagaca ccgttcact gtttcaaaa ataaacaaa aacaaaaat atataatat atacacatt ataaacgta caatgtaag aacatgctg tactattgt taattaagt atatataag gaactgatg atgatgatg tttttcatt tgtgttttc gtgacaagg tcggaaaat tgcatttct ctctctctc cttctcatt cgagtgtcg aaatttcat cgtaaaaca aacattccg ttcgcgtcg tgttattta tgtgttctt gactaaatt taaataatc agactcatt ttcgtccgt tcacgttac tcttaattc tgaagcttg catgagttt tatttttta aatgtaaat tactgacat gcatatttt gttttcaaa tcaataaaa cattcaaac aagt
- >TC015608 RB
tcgccattg cttaatttt gtagtgact tttgtacgc ttttaatta tggctaaat cacgtgcgt taaaaacta ataaattga acgaaaccc ctggtaaaa aatcaactc aaaccaaac acgtgtctt ggagggacg aacaaggtg ccagtttga ccggaagta ccgaatttt cggatccgg cgattttgg ccgtcaatc cgaaatttc gttacgaaa aagaggagt tgttaaagt tgcgagatg ctccattat ctcaacgga agcccgatt ttttggacg tcaatgaag tttcgccga ctatttggg acccaactc gttggaatt tcgataaga aaaagtccg aaactccga ccgaaaacg ggccacgga ctgtagacg atcacaggc gtcgtcctg gtgatccgc gcgaacgca tccggaagg aaaacgacg ggatcgtct tgagtccgc agcgccgga gtttcaatt ccggttgtt caattccgg gtcgcgaga cgaggacga acaacacga atcggcctc atagtcctt tagggaaga acgagtcgc atttgagtg gcgttaggg agatacaga cgaatagtc gaaggatcg gaagtggga gaattctaa gagattcgt gggatttcg gcgagaaac aggagaacg aaactgagt acaatttta gaccgcaac agaggagcg aaaatcagg agagaaggt cgtttgggc gagattttg acgtcggaa gggacaagg agaagagga atggtggaa ggtttaacg agaggagaa gaatcagcg gcgaatccc gtgacgagg agcccgaat ggttctcat ccggtccgt cttcccaaa acgatacaa tcgaattgc gcggtttcg acgattcgg atcgtctcg gaaagaaga aaatgtcac cgtcgcaag cgaaacgcg cacgcgatt ggttcaaaa agaagactg aagtgtcga gtgtgaccg aagaaaagg aagaaatga gcgaaggtg gtcccggtg gccggtcaa cgcctacgc cgcagagcg gttcaggtg aaacaatcg gcggggaac aaacaaatg agtcaaaca caaacgcgt ctgaaagtg gagatggtg acggaaaac acaatcaag agaagaatc tgaacgacc aatcgtcga tttttgaag atatcttga agtcggata gtattcccg gactgccag ggttgttaa ctaatggtg tgggtggtg acggcgacg cgaccggga aatcgcgtt tcagtaaat ggttttcag tggaaagca atgcgtctg aaagtcggc gttcttcca tgcaggatg agccgattt ttaagaatt tgttgaaag atttgaatg agccaagtg tttcgattc cgggtgatt ctaattcgt atttcgcgc cgatttcgc cggctgcta atacggggg gaagtctag gaggtgcag gaggaggca ctgccaagt ccattaata ttatggaga tgctacaaa ggggcaaac agagcgaga ctggaggaa tgaaacaac aagtaccgg gtcgtatta tgaatttgg acgagctgg aggcgaaga tgaggcaaa atactgagc cgcaaatgc acaaacatc cccaaaaat ctgaagaag acatgactg cgtttaacc gattgttgg cacacattt ctgggaacc acacagcta cggcaaacg gtccagtcc ccaaaactc agccaatga gcctaatgg agatgctct cgcattcgc agcaacaag atgaagctc acgctcgca tggctcaac ttttaggtc catcaagtc ctggtgctt caccgcacg acatcgccg gtcgtttac aacaacaag tccaaagtc aacaacaga aagaaatgt tgtcgaagt tgatgagtg ccaatatgc cggtgaggg cttcgcccc tgtcagaaa tgggcatac aacaaagtc gcgaattgt tgagtcggc ccgaagcac aagccatac ttcaagcgc tccatcaac gcattccat cgccccgtg aattacaag tccataccc aaaacattc tccagaggg cgctcatta agaaaaaac tcgaagaac aacaagaaa actatcgca aaaaacaag aaatgcaac agcgtggtc aaagtccca acaacaaca acaacaata acaatacaa caaatcaag cgaaaagtg tttcgtctc caactccgt tagccttca cgccaactt cagtattac gaaaaatga cagcggaaa aagacgaag gcgggaaag acgtcacaa aacttgtcg aaggtgcaa aattgagtc aaggtcgtg ccgtgactg gaatgcgtc cgcaacaac agccccaac aacaacaac agcaacaac aatggccac agtatccgt tgaatatca agcaagctg gtcgtccga ttgttaaag caaatacat ttcaacaac aacagccac aacaacagg aacagtttt ttactcaac aacaacaac agaaatttc taaatcaat tgcaacaac aacagcaac aacagcgca aagctacga attatcacg gccatggtt cgatgcaag gtcatcatt cccaatatc ccaacacta ataatcaac agttctctc agttgactc aacaacaac tcagagctc aacatcaac aacacgcca gaccgacaa atgtggtac aacaacaac agcaaggac acgggaggg cgtggcaac agtacctta atccgcagc aaactaggg gtcaggtgg gtcgtgggg gcaccgacg gggacctgt caccaacca gcaaccagt tgactcgct ggttttcgc ccgatttgt tggagaggg cccgcgtgg gtgaattac cgagcacag ccggcttgt ctcagaatt tactcagtt tggaggaga tcgaaagac ttacagccc caccggtcc acaattaat ttaaagata ctcagtacc tggcctcga ctcttctaa tttttgcaa atcaatgtc aacgaaaag gactcttat atttaacaa tttagtggc attattgtc gtagatgac gtgtcaaaa aaaggattt ctttcgttt aaaatatac tcaacgacc gaccggtga agaagaacg tgcgacaga ttcgattca ttgaaaatg taatttttg tatatagtc atggaaaat gatccaatt gtgatagtc ctagtaagt taacgtcgg atcgggttt gtcgcagaa aaaacggtc gataaagct ccactagat gtgtgtgtg tgtcagaac gatggttta gttctgtgt cgagtttct gtgggatat ttcgggaaa aattttgct ttcgttttg gattctgat agcggaggt ttcagttgc ggtttgatg ttttctcta ggatttttc gtttcattt tggtgttta atcggggct ttagacacc gttcactgt ttcaaaaat aaacaaaaa caaaaatat ataatatat acacattat aaacgtaca atgtaagaa catgctgta ctattgtta attaagtat atataagga actgatgat gatgatgtt tttcatttg tgttttcgt gacaaggtc ggaaaattg catttctct ctctctcct tctcattcg agtgtcgaa atttcatcg taaaacaaa cattccgtt cgcgtcgtg ttatttatg tgttcttga ctaaattta aataatcag actcatttt cgtccgttc acgttactc ttaattctg aagcttgca tgagtttta ttttttaaa tgtaaatta ctgacatgc atattttgt tttcaaatc aataaaaca ttcaaacaa gt
- >TC015608 RC
tcgccattg cttaatttt gtagtgact tttgtacgc ttttaatta tggctaaat cacgtgcgt taaaaacta ataaattga acgaaaccc ctggtaaaa aatcaactc aaaccaaac acgtgtctt ggagggacg aacaaggtg ccagtttga ccggaagta ccgaatttt cggatccgg cgattttgg ccgtcaatc cgaaatttc gttacgaaa aagaggagt tgttaaagt tgcgagatg ctccattat ctcaacgga agcccgatt ttttggacg tcaatgaag tttcgccga ctatttggg acccaactc gttggaatt tcgataaga aaaagtccg aaactccga ccgaaaacg ggccacgga ctgtagacg atcacaggc gtcgtcctg gtgatccgc gcgaacgca tccggaagg aaaacgacg ggatcgtct tgagtccgc agcgccgga gtttcaatt ccggttgtt caattccgg gtcgcgaga cgaggacga acaacacga atcggcctc atagtcctt tagggaaga acgagtcgc atttgagtg gcgttaggg agatacaga cgaatagtc gaaggatcg gaagtggga gaattctaa gagattcgt gggatttcg gcgagaaac aggagaacg aaactgagt acaatttta gaccgcaac agaggagcg aaaatcagg agagaaggt cgtttgggc gagattttg acgtcggaa gggacaagg agaagagga atggtggaa ggtttaacg agaggagaa gaatcagcg gcgaatccc gtgacgagg agcccgaat ggttctcat ccggtccgt cttcccaaa acgatacaa tcgaattgc gcggtttcg acgattcgg atcgtctcg gaaagaaga aaatgtcac cgtcgcaag cgaaacgcg cacgcgatt ggttcaaaa agaagactg aagtgtcga gtgtgaccg aagaaaagg aagaaatga gcgaaggtg gtcccggtg gccggtcaa cgcctacgc cgcagagcg gttcaggtg aaacaatcg gcggggaac aaacaaatg agtcaaaca caaacgcgt ctgaaagtg gagatggtg acggaaaac acaatcaag agaagaatc tgaacgacc aatcgtcga tttttgaag atatcttga agtcggata gtattcccg gactgccag ggttgttaa ctaatggtg tgggtggtg acggcgacg cgaccggga aatcgcgtt tcagtaaat ggttttcag tggaaagca atgcgtctg aaagtcggc gttcttcca tgcaggatg agccgattt ttaagaatt tgttgaaag atttgaatg agccaagtg tttcgattc cgggtgatt ctaattcgt atttcgcgc cgatttcgc cggctgcta atacggggg gaagtctag gaggtgcag gaggaggca ctgccaagt ccattaata ttatggaga tgctacaaa ggggcaaac agagcgaga ctggaggaa tgaaacaac taccgggtc gtattatga atttggacg agctggagg cgaagatga ggcaaaata ctgagccgc aaatgcaca aacatcccc aaaaatctg aagaagaca tgactgcgt ttaaccgat tgttggcac acatttctg ggaaccaca cagctacgg caaacggtc cagtcccca aaactcagc caatgagcc taatggaga tgctctcgc attcgcagc aacaagatg aagctcacg ctcgcatgg ctcaacttt taggtccat caagtcctg gtgcttcac cgcacgaca tcgccggtc gtttacaac aacaagtcc aaagtcaac aacagaaag aaatgttgt cgaagttga tgagtgcca atatgccgg tgagggctt cgcccctgt cagaaatgg gcatacaac aaagtcgcg aattgttga gtcggcccg aagcacaag ccatacttc aagcgctcc atcaacgca ttccatcgc cccgtgaat tacaagtcc atacccaaa acattctcc agagggcgc tcattaaga aaaaactcg aagaacaac aagaaaact atcgcaaaa aacaagaaa tgcaacagc gtggtcaaa gtcccaaca acaacaaca acaataaca atacaacaa atcaagcga aaagtgttt cgtctccaa ctccgttag ccttcacgc caacttcag tattacgaa aaatgacag cggaaaaag acgaaggcg ggaaagacg tcacaaaac ttgtcgaag gtgcaaaat tgagtcaag gtcgtgccg tgactggaa tgcgtccgc aacaacagc cccaacaac aacaacagc aacaacaat ggccacagt atccgttga atatcaagc aagctggtc gtccgattg ttaaagcaa atacatttc aacaacaac agccacaac aacaggaac agtttttta ctcaacaac aacaacaga aatttctaa atcaattgc aacaacaac agcaacaac agcgcaaag ctacgaatt atcacggcc atggttcga tgcaaggtc atcattccc aatatccca acactaata atcaacagt tctctcagt tgactcaac aacaactca gagctcaac atcaacaac acgccagac cgacaaatg tggtacaac aacaacagc aaggacacg ggagggcgt ggcaacagt accttaatc cgcagcaaa ctaggggtc aggtgggtc gtgggggca ccgacgggg acctgtcac caaccagca accagttga ctcgctggt tttcgcccg atttgttgg agagggccc gcgtgggtg aattaccga gcacagccg gcttgtctc agaatttac tcagtttgg aggagatcg aaagactta cagccccac cggtccaca attaattta aagatactc agtacctgg cctcgactc ttctaattt ttgcaaatc aatgtcaac gaaaaggac tcttatatt taacaattt agtggcatt attgtcgta gatgacgtg tcaaaaaaa ggatttctt tcgtttaaa atatactca acgaccgac cggtgaaga agaacgtgc gacagattc gattcattg aaaatgtaa tttttgtat atagtcatg gaaaatgat ccaattgtg atagtccta gtaagttaa cgtcggatc gggtttgtc gcagaaaaa acggtcgat aaagctcca ctagatgtg tgtgtgtgt cagaacgat ggtttagtt ctgtgtcga gtttctgtg ggatatttc gggaaaaat tttgctttc gttttggat tctgatagc ggaggtttc agttgcggt ttgatgttt tctctagga tttttcgtt tcattttgg tgtttaatc ggggcttta gacaccgtt cactgtttc aaaaataaa caaaaacaa aaatatata atatataca cattataaa cgtacaatg taagaacat gctgtacta ttgttaatt aagtatata taaggaact gatgatgat gatgttttt catttgtgt tttcgtgac aaggtcgga aaattgcat ttctctctc tctccttct cattcgagt gtcgaaatt tcatcgtaa aacaaacat tccgttcgc gtcgtgtta tttatgtgt tcttgacta aatttaaat aatcagact cattttcgt ccgttcacg ttactctta attctgaag cttgcatga gttttattt tttaaatgt aaattactg acatgcata ttttgtttt caaatcaat aaaacattc aaacaagt
If you use iBeetle-Base, please cite: Dönitz J et al.: Expanded and updated data and a query pipeline for iBeetle-Base,
Nucleic Acids Res. 2018 Jan 4;46(D1):D831-D835. doi: 10.1093/nar/gkx984.
The data is licensed under a
Creative Commons Attribution 3.0 Unported License. (CC-BY)
